prot_Ecto-sp13_S_contig6325.17070.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6325.17070.1
Unique Name	prot_Ecto-sp13_S_contig6325.17070.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	474

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: D7G596_ECTSI (Putative DP transcription factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G596_ECTSI)

HSP 1 Score: 742 bits (1916), Expect = 1.540e-266
Identity = 447/461 (96.96%), Postives = 450/461 (97.61%), Query Frame = 0

Query:   14 MESLMFPGDATSPMPSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKEGGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXXGGHRGGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSKPKKSRRTLPPATAAXXXXXXXXXXXXXXXPAGRTRRACTNYGADAPSDTALQTKRAKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            MESLMFPGDATSP PSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGK+GGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXX  HR GVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSK KKSRRTLPPATA XXXXXXXXXXXXXXXPAGRTRRACT+YGADAPSDTALQTKR KKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLP+NSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRS  XXXXXXXXXXXXXX  AECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL
Sbjct:    1 MESLMFPGDATSPTPSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKDGGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXXXXHRVGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSKSKKSRRTLPPATAXXXXXXXXXXXXXXXXPAGRTRRACTHYGADAPSDTALQTKRTKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSRAXXXXXXXXXXXXXXNGAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 461

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S0P3J9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3J9_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 1.430e-54
Identity = 114/211 (54.03%), Postives = 145/211 (68.72%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAA--EGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            +KGLRHFS+KVC KVE+KG TTYNEVADELV E AA  E  + +  +  YD+KNIRRRVYDALNVLMA+DII+K++K I W+GLP N+ + G R LQ +   R+  LD K+  L +LL QQISF+NL RRNRS                  A  A+ Q      A +I +PFI+VSS ++TVI CEMAE+++++FFNFS  F+I DDNEIL
Sbjct:  177 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVNEFAAVAETSMMSEVDQQYDEKNIRRRVYDALNVLMAMDIITKEKKNIMWRGLPANTQQEGAR-LQMDLASRKERLDKKRLHLQELLTQQISFKNLIRRNRSPAS---------------ASTAQAQ------ADRIPLPFIIVSSRNETVIDCEMAEDKQEIFFNFSAPFEIHDDNEIL 365

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S3WVG7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WVG7_9SPIT)

HSP 1 Score: 194 bits (493), Expect = 2.250e-54
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGK----EPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            +KGLRHFS+KVC KVE+KG TTYNEVADELVQE    G +G G     E  YD+KNIRRRVYDALNVLMA+DII+K++K+I W+GLP N+ + G R +Q +   RE  L+ K+  L +LL QQISF+NL +RN+                   +   + + ++   A +I +PFI+V+S  +TVI CEMAE+++++FFNFS  F+I DDNE L
Sbjct:   61 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVQEFVNAGMVGGGDGEDGETQYDEKNIRRRVYDALNVLMAMDIITKEKKQILWRGLPTNTQQEGTR-MQMDIASREERLNKKRLHLQELLTQQISFKNLIKRNQMRGGSGSTDHARSMANGA-SSVTDPRSSDVANADRIPLPFIIVNSGKETVIDCEMAEDKQEIFFNFSAPFEIHDDNETL 271

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S0L8F0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8F0_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 2.350e-53
Identity = 113/211 (53.55%), Postives = 143/211 (67.77%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAA--EGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            +KGLRHFS+KVC KVE+KG TTYNEVADELV E AA  E  + +  +  YD+KNIRRRVYDALNVLMA+DII+K++K I W+GLP N+ + G R LQ +   R+  LD K+  L +LL QQISF+NL +RNRS                  A  A  Q        KI +PFI+VSS ++TVI CEMAE+++++FFNFS  F+I DDNEIL
Sbjct:  182 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVAEFAAVAESAMMSEVDQQYDEKNIRRRVYDALNVLMAMDIITKEKKNIMWRGLPANTQQEGAR-LQMDLSSRKERLDKKRLHLQELLTQQISFKNLIQRNRSP-----------------AAAATTQ------GDKIPLPFIIVSSRNETVIDCEMAEDKQEIFFNFSAPFEIHDDNEIL 368

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A2D4C957_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C957_PYTIN)

HSP 1 Score: 193 bits (491), Expect = 3.310e-53
Identity = 112/217 (51.61%), Postives = 146/217 (67.28%), Query Frame = 0

Query:  259 KKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVA-ASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            K+ + K NKGLRHFS++VC+KVEEK  TTYNEVADELV+E        T     YD+KNIRRRVYDALNVLMA+DIISK+RKEI+W+GLP N        L  E+ +R +S++ KK  L DLLVQQ++ +NL +RN                    A+  +E   + +    +IF+PFIVV++S DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL
Sbjct:  183 KRKQLKINKGLRHFSLRVCQKVEEKNVTTYNEVADELVREFVTMRPNDTA----YDEKNIRRRVYDALNVLMALDIISKERKEIRWRGLPTNLQHDA-EMLIAERNERVKSVEQKKQHLQDLLVQQVAMKNLLKRN--------------------AKRRKESTLDALRDEGRIFLPFIVVNTSKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEIL 374

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: W4FM68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM68_9STRA)

HSP 1 Score: 192 bits (489), Expect = 7.300e-53
Identity = 111/232 (47.84%), Postives = 150/232 (64.66%), Query Frame = 0

Query:  243 YGADAPSDTALQTKRAKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            +GA  P     ++        K +KGLRHFS+KVC+KVEEK  TTYNEVADELV E      +   +  +YD+KNIRRRVYDALNVLMA+DIISK++KEI+W+GLP N+ +  L  LQ E   R +S++ KK QL +LL+QQI+ +NL +RN+                         Q  +  A  +I +PFI+V++S DT+IQCEM+E+R+D+FFNFS  F+I DD+EIL
Sbjct:  182 HGASTPKKKKPRSTSTTPVSDKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVT---MRPAESVNYDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLPSNAKQD-LELLQMENAQRAKSVEQKKQQLQELLLQQIALKNLIQRNK-------------------------QVDKPSALCRISLPFILVNTSKDTIIQCEMSEDRQDIFFNFSGPFEINDDSEIL 384

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A3F2S1S5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S5_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.490e-53
Identity = 108/212 (50.94%), Postives = 138/212 (65.09%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAA---SKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            NKGLRHFS+KVC+KVEEK  T+YNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +S++ KK  L DLLVQQ++ +NL +RN                         E     +AA    ++F+PFI V++S DTVIQCEM+E+R+D+FFNFS  F+I DD +IL
Sbjct:   18 NKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMRP----NDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLLAERNERMKSVEQKKQHLQDLLVQQVAMKNLLKRNAERK-----------------RLESENPVSAIAARDEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADIL 207

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: K3WUL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL3_GLOUD)

HSP 1 Score: 192 bits (487), Expect = 1.460e-52
Identity = 109/209 (52.15%), Postives = 140/209 (66.99%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            NKGLRHFS+KVC+KVEEK  T+YNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +SL+ KK  L DLLVQQ++ +NL +RN +                   E +   ++      +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS  F+I DD EIL
Sbjct:  190 NKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMRP----NDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLIAERNERRKSLEQKKQHLQDLLVQQVAMKNLLKRNAARRKAE-------------TELSVASESGHGDEGRIFLPFIVVNTAKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEIL 380

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A8K1CI48_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI48_PYTOL)

HSP 1 Score: 190 bits (483), Expect = 2.320e-52
Identity = 110/209 (52.63%), Postives = 140/209 (66.99%), Query Frame = 0

Query:  266 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            NKGLRHFS+KVC KVEEK  TTYNEVADELV+E        +G    YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +S++ K+  L DLLVQQ++ +NL +RN                     E   +   +E    +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL
Sbjct:  160 NKGLRHFSMKVCEKVEEKNVTTYNEVADELVREFVTLRPNDSG----YDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPTNLQHDA-EMLIAERNERMKSVEQKRQHLQDLLVQQVAMKNLLKRNTKRRK----------------ENGTDTLRDE---GRIFLPFIVVNTNKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEIL 344

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BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S2RBZ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBZ6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.710e-52
Identity = 112/221 (50.68%), Postives = 144/221 (65.16%), Query Frame = 0

Query:  258 AKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLG----TGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 474
            A K  AK NKGLRHFS++VC+KVEEKG T+YNEVADELV+E  A+ +      T K+  YD+KNIRRRVYDALNVLMA+DI+SK++KEI+WKGLP ++  + L  L +E+  R   +  K+  L DLLVQ + FRNL RRN+S                           +   +  I +PFIVV++S+D VIQCEMA +R DV F+FS  F+I DDNEIL
Sbjct:   38 APKSNAKANKGLRHFSMRVCKKVEEKGHTSYNEVADELVKEFVAQRQEDQQPDTKKKKTYDEKNIRRRVYDALNVLMAMDIVSKEKKEIRWKGLPSHTH-ADLEMLHRERAHRLAEVQRKRECLQDLLVQNVCFRNLVRRNQS---------------------------QPPPSEPIPLPFIVVNTSNDAVIQCEMAPDRSDVMFDFSMPFEINDDNEIL 230

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G596_ECTSI	1.540e-266	96.96	Putative DP transcription factor n=2 Tax=Ectocarpu...	[more]
A0A7S0P3J9_9EUKA	1.430e-54	54.03	Hypothetical protein n=1 Tax=Calcidiscus leptoporu...	[more]
A0A7S3WVG7_9SPIT	2.250e-54	50.23	Hypothetical protein n=1 Tax=Strombidinopsis acumi...	[more]
A0A7S0L8F0_9EUKA	2.350e-53	53.55	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A2D4C957_PYTIN	3.310e-53	51.61	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
W4FM68_9STRA	7.300e-53	47.84	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A3F2S1S5_9STRA	7.490e-53	50.94	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
K3WUL3_GLOUD	1.460e-52	52.15	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A8K1CI48_PYTOL	2.320e-52	52.63	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2RBZ6_9STRA	3.710e-52	50.68	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 356..376
IPR014889	Transcription factor DP, C-terminal	SMART	SM01138	DP_2	coord: 354..474 e-value: 2.9E-18 score: 76.7
IPR014889	Transcription factor DP, C-terminal	PFAM	PF08781	DP	coord: 357..401 e-value: 5.0E-8 score: 32.9 coord: 419..474 e-value: 1.4E-12 score: 47.7
IPR003316	E2F/DP family, winged-helix DNA-binding domain	SMART	SM01372	E2F_TDP_2	coord: 264..346 e-value: 2.3E-29 score: 113.6
IPR003316	E2F/DP family, winged-helix DNA-binding domain	PFAM	PF02319	E2F_TDP	coord: 266..346 e-value: 1.9E-23 score: 82.3
IPR038168	Transcription factor DP, C-terminal domain superfamily	GENE3D	1.20.140.80		coord: 354..474 e-value: 1.6E-24 score: 88.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 258..353 e-value: 2.3E-37 score: 128.7
IPR015648	Transcription factor DP	PANTHER	PTHR12548	TRANSCRIPTION FACTOR DP	coord: 251..474
IPR037241	E2F-DP heterodimerization region	SUPERFAMILY	144074	E2F-DP heterodimerization region	coord: 423..474
IPR037241	E2F-DP heterodimerization region	SUPERFAMILY	144074	E2F-DP heterodimerization region	coord: 357..398
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 267..347

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6325	contig	Ecto-sp13_S_contig6325:1..6075 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6325.17070.1	mRNA_Ecto-sp13_S_contig6325.17070.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6325 1..6075 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6325.17070.1 ID=prot_Ecto-sp13_S_contig6325.17070.1|Name=mRNA_Ecto-sp13_S_contig6325.17070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=474bp
MTTKTRDRGQGEEMESLMFPGDATSPMPSFGLWDEIEDNGKFSSLKRKHD
DTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKEGGLGSAAKMLR
PFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAPPMSM
TASAIFSPNPGGHRGGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPK
SKPKKSRRTLPPATAAPPTRDIPPPEPVPPPPAGRTRRACTNYGADAPSD
TALQTKRAKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELA
AEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQN
SSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSRAAA
RAAAAAAAAAAGNEAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEM
AENREDVFFNFSHEFQIADDNEIL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014889	Transc_factor_DP_C
IPR003316	E2F_WHTH_DNA-bd_dom
IPR038168	TF_DP_C_sf
IPR036388	WH-like_DNA-bd_sf
IPR015648	Transcrpt_fac_DP
IPR037241	E2F-DP_heterodim
IPR036390	WH_DNA-bd_sf