mRNA_Ecto-sp13_S_contig6311.17054.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6311.17054.1
Unique NamemRNA_Ecto-sp13_S_contig6311.17054.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 714 bits (1843), Expect = 9.140e-257
Identity = 347/441 (78.68%), Postives = 380/441 (86.17%), Query Frame = 3
Query:   33 MLGKVWILPLYAVITTIFRAPFASCQSCGCGGPTSAAKDTGSIDVLQCGD-DGGGECGDKVCVCNYGVSIEVDIVAFLAGTATEPTISWYCEHDGGDGYCTNCETSSE---CDEDIGEICCPETGLCS---VPDAAGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLFAAARNHP 1334
            M  KVWILPL  ++   F A FA  Q+C CGGPT  +     IDVLQCG  DG  +CG  +CVCNY +SI+VD+VAFLAGT  + +ISWYC+H G DGYCT C  +++   C  D   ICCPETGLCS     D AGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITG+GIKT D EGLDHS+VITVTDP SLDSACPV+GSTCLADGALT+ELDG+VALL+PGE ELGP VAISAVNLPG+CRSFGFEKYWERKKAEY ASGR+LN+  QMQ+MSDWILGDPTATNMAECTEYVLGATVDGQAGL +++SEHTSFQI TPKG+IRLSHGRLHQLAMRDPTDRFDIP+HLTWQMNLAFDNVDLA+DATGILGETQQHT DANGNPIMEGMAAIRGSQEDYLV+GPLD +F AARNHP
Sbjct:    1 MWAKVWILPLCTMMVATFSASFAFGQTCSCGGPTVDSPSVADIDVLQCGAADGTTDCGGNICVCNYDISIDVDLVAFLAGTG-DVSISWYCDHGGNDGYCTTCTEATQDTDCPTDEKPICCPETGLCSHEPTDDDAGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVFVAARNHP 440          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 1.560e-125
Identity = 195/332 (58.73%), Postives = 235/332 (70.78%), Query Frame = 3
Query:  336 CETSSECDEDIGEICCPETG--LCSVP-DAAG--ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAG-LLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLF 1313
            C+   +C    G  CC ET   +C  P + +G  ACGDPHMTGFLGQKFDF G+DG +YA++SD P++ +NMRVTSPVP+ PEITYITG+ + T DA G  HSIVI V +P  ++SACP   S CLADG+L + L+G+  L APG V L   V ++AVNLPG CRSFGFE YWERKK E A  GR L +    Q M DW+LGDPTATNM EC EYV  A  +GQAG L   +SEH SFQI TP  ++RLSHGRLHQ+A RDPT+RFD+P+H TWQMN+  D+ +++  ATGILGET   T DA G  IM GM AIRGS+EDY V GPLD  F
Sbjct:   55 CDRDDQCK--TGLKCCDETDPKVCKDPTETSGPRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPSLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYWERKKLENARHGRHLGE----QSMGDWLLGDPTATNMDECMEYV--AQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.790e-125
Identity = 187/319 (58.62%), Postives = 235/319 (73.67%), Query Frame = 3
Query:  336 CETSSECDEDIGEICCPETGLCSVPDAAG--ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYA-ASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDG-QAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQED 1280
            CET+++C     EICCP   +C +P      ACGDPHMTGF GQKFDF G DGEWY ++SD+P + +NMRVT+PVP+ P+ITYITG+ + T D  GLDHS+VITV DP SL+S+CP   + CLA+GAL++ LDG+ AL APG VE+ PN+ +S VNLPG+CRSFGFEKYWERKK EYA A GR+L+  S+ Q M DWILGDPTATNMAECTEYV    V+G   GL  H+SEH SFQI  P  ++RLSHGRLHQ+A      ++ +P+H TWQMNLA D+  + + A G+LGET   T DA+G  +M GM +IRG+QE+
Sbjct:   25 CETNTDCTSP--EICCPVKKVCELPLPTDPTACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSRPDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLS--SKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIA------QYGLPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDADGEYVMHGMESIRGTQEE 333          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 3.610e-123
Identity = 192/319 (60.19%), Postives = 230/319 (72.10%), Query Frame = 3
Query:  369 GEICCPETGLCSV---PDAAGA-CGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLF 1313
            G ICC +   C V       G  CGDPHMTGFLGQKFDF G+DG WY+V++D  ++ VNMRVTSPV   PEITYITG+ + T D +GL+HSIVI V DP +LDS+CP   S CL DGAL + LDG  +L APG V LG +V +SA NLPG+CRSFGFEKYWERKK E A +GR L        M +WILGDPTATNM EC EYV  A  + + G+  H+SEH SFQI TPK ++RLSHGRLHQ+AMRDPTDRFD+P+HLTWQMN+A  + D++  A GILG+T   T DA+G PIM G+ AIRGS+EDY V+G L   F
Sbjct:  294 GLICCEKKDYCDVFGDESVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADS-NMNVNMRVTSPVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYWERKKLENARAGRLLRT---TPSMGEWILGDPTATNMNECVEYVARAEAE-EGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDF 607          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 5.130e-122
Identity = 184/280 (65.71%), Postives = 213/280 (76.07%), Query Frame = 3
Query:  441 MTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQED 1280
            MTGF GQKFDF GQDG WY+V SDMP + +NMR  S VP+ PEITYITG+GI T DA GLDH+IVITVTDP SLDSACPV  S CLADGALT++LDG+ ALLAPGEV  GP VAISAVNLPG+CRSFGFE+YWERKK EYA  GR+L   +QMQ MSDWILGDPTATNMAECTEYV+ AT +G  GL +H+ EHTSFQI TP G+IR +                         MNLA D +D++ +ATGILGETQ+ T DANG+PIM+GMA+IRG+Q+D
Sbjct:    1 MTGFRGQKFDFTGQDGGWYSVHSDMPRIHLNMRARSLVPSVPEITYITGLGITTTDANGLDHTIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAFTSFPC----------------MNLAIDRIDVSPNATGILGETQKPTLDANGSPIMQGMASIRGAQDD 264          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 4.280e-117
Identity = 195/332 (58.73%), Postives = 234/332 (70.48%), Query Frame = 3
Query:  330 TNCETSSECDEDIGEICCPETGLCSVPDAAG--ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYA-ASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAG-LLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLF 1313
            T CE  S+C   + E CC    +C V D     ACGDPHMTGF GQKFDF G DG+WY ++SD+P + +NMRVTSPV + P+ITYITG+ + T D +G +HSI+I+V DP SLDS C    S CLADG+L + LDG   LLAPG VEL  +V +SAVN+PG+CRSFGFEKYWERKK EYA A GR+L   S  Q M +WILGDPTATNMAECTEYV      G+ G L  H+SEH SFQI TP   IRLSHGRLHQ+A      +F +P+H+TWQMNLA D+ D++L+A G+LGET   T   +G  IM GM AIRG+QEDY VEGPL   F
Sbjct:  747 TACEDDSDCT--LPEECCLLKLVCEVADPTDPTACGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTSPVSSRPDITYITGLSLITTDGDGQEHSIIISVKDPYSLDSDCSPGVSPCLADGSLIVVLDGNETLLAPGAVELASDVMVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRRL---SVQQSMGEWILGDPTATNMAECTEYVARHIAGGEDGDLFTHQSEHASFQIVTPAAIIRLSHGRLHQIA------QFGLPDHMTWQMNLAVDHNDVSLNAKGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDF 1067          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 1.000e-110
Identity = 174/304 (57.24%), Postives = 209/304 (68.75%), Query Frame = 3
Query:  405 VPDAAGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVG------------IKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQED 1280
            +P      G PHMTGFLGQKFDF G+DG WY++++D  ++ VNMRVTSP    P       +G            + T DA+G DHSIVI V +P SLDS+CP   S CLADGAL + LDG+ AL A G V LG  V ISAVNLPG+CRSFGFEKYWE KK EYA  GR+L        M +WILGDPTATNM EC EYV  A  + + G+  H+SEH SFQI TP  ++RLSHGRLHQ+AMRDPTD++D+P+HLTWQMNLA D+  ++  A GILGET   T DA+G PIM GM AIRG++ED
Sbjct:    1 MPPVFSLSGGPHMTGFLGQKFDFTGEDGGWYSIIADS-NMNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWEHKKLEYATGGRQLRT---QPSMGEWILGDPTATNMDECVEYVARAEAE-EGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEED 299          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.030e-108
Identity = 184/334 (55.09%), Postives = 227/334 (67.96%), Query Frame = 3
Query:  330 TNCETSSECDEDIGEICCPETGLCSVPDAAG--ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSIVITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYA-ASGRKLNDFSQMQKMSDWILGDPTATNMAECTEYV---LGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLF 1313
            T C    +C   + E C     +C VP      A GDPHMTGF GQKFDF G DG+WY ++SD+P + +NMRVT+PV + P+ITYITG+ + T D  G +HSI+I+V DP +LDS CP   S CLADG+L + LDG   L APG VEL P+V +SAVN+PG+CRSFGFEKYWERKK EYA A GR L      Q M +WILGDPTATN+ ECTEYV   +  +VDG   L  H+SEHTSFQI TP   +RLSHGR HQ+A         +P+H+TWQMNLA D+ D++L A G+LGET   T  A+G  +M GM AIRG++EDY V+GPL   F
Sbjct:  565 TGCVDDGDCT--LPEECTLVKLVCEVPILTDPTAGGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTAPVSSRPDITYITGLSLITTDGGGQEHSIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRGL---LTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGD--LFAHQSEHTSFQIVTPTAVVRLSHGRRHQIA------ELGLPDHVTWQMNLAVDHNDVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGF 885          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.600e-39
Identity = 123/376 (32.71%), Postives = 188/376 (50.00%), Query Frame = 3
Query:  264 AGTATEPTISWYCEHDG-GDGYCTNCETS--------SECDEDIGEICCPETGLCSVPDAA--------GACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMP-DLEVNMRVTSPVPAE-PEITYITGVGIKTIDAEGLDHSIVITVTDPRSL-DSACPVKGSTCLADGALTIELDGEVA---LLAPGEVELGPN-VAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILG-DPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDA-TGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLF 1313
            AG AT   I   C  DG G   C + ET+        + CD  IG   C E GL +  +A+          CGDPHM G  GQ+ D+ G DG WY+++ D   D+ +N+R+T+P+P E P+   +T + +    ++G  HS+VI V +P ++  + CP   S CLA+G L I +D +     L     V +    + +S+ NLP  C+ FG ++ W R   +     R+L+    ++   +WIL  D        C +Y+       +  L D +S+H  F+I TP  ++RL+ G  +Q       D   +P+   WQM +  D +D+   A +G+LGET +  +D NG  +MEG  A RG+ EDY V   LD  F
Sbjct:   44 AGCATSSAIG-DCASDGLGGALCFSRETAPTGTACEAAGCDCFIGV--CFEPGLSATCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVL---SKG--HSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLE---EWILKYDHGMAAPGWCAKYIA------ENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHF 402          
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 9.390e-38
Identity = 104/305 (34.10%), Postives = 156/305 (51.15%), Query Frame = 3
Query:  429 GDPHMTGFLGQKFDFVGQDGEWYAVVSD-MPDLEVNMRVTSPVPAE-PEITYITGVGIKTIDAEGLDHSIVITVTDPRSL-DSACPVKGSTCLADGALTIELDG----EVALLAPGEVELGPNVAISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILG-DPTATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLHQLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDA-TGILGETQQHTFDANGNPIMEGMAAIRGSQEDYLVEGPLDTLFA 1316
            GDPHM G  GQ+ ++ G DG WY++V D   DL +N+RVT+P+P E P+   +T + I    +EG  +S+VI V +P ++    CP   S CLA+G L I +DG    E+   +         + +SA NLP  CR FG  + W R   +     R+L     ++   +WIL  D        C +Y+       +  L D ++ H  F+I TP  ++RL+ G  +Q       D   +P+   WQM++  D +D+   A +G+LGET +  +  NG  +MEG  A RG+ EDY V   L   FA
Sbjct:   14 GDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIM---SEG--YSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLE---EWILRYDQNMPARRWCAKYIA------ENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6311.17054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5K7V7_9PHAE9.140e-25778.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE1.560e-12558.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE2.790e-12558.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE3.610e-12360.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W0_9PHAE5.130e-12265.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE4.280e-11758.73LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5L5Y7_9PHAE1.000e-11057.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRC1_9PHAE1.030e-10855.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS96_9PHAE1.600e-3932.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW2_ECTSI9.390e-3834.10Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6311contigEcto-sp13_S_contig6311:1520..6441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score61.2
Seed ortholog evalue1.4e-06
Seed eggNOG ortholog2880.D8LCQ0
Model size1412
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG OGs28MX6@1,2QUFK@2759
Ec32 ortholog descriptionimm upregulated 6
Ec32 orthologEc-11_006310.1
Cds size1305
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6311.17054.1prot_Ecto-sp13_S_contig6311.17054.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6311 1595..6409 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463875.7782114-UTR-Ecto-sp13_S_contig6311:1519..15941681463875.7782114-UTR-Ecto-sp13_S_contig6311:1519..1594Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6311 1520..1594 -
1681463875.8614664-UTR-Ecto-sp13_S_contig6311:6409..64411681463875.8614664-UTR-Ecto-sp13_S_contig6311:6409..6441Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6311 6410..6441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463875.7907593-CDS-Ecto-sp13_S_contig6311:1594..16501681463875.7907593-CDS-Ecto-sp13_S_contig6311:1594..1650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6311 1595..1650 -
1681463875.8016644-CDS-Ecto-sp13_S_contig6311:2044..25111681463875.8016644-CDS-Ecto-sp13_S_contig6311:2044..2511Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6311 2045..2511 -
1681463875.818408-CDS-Ecto-sp13_S_contig6311:2701..30861681463875.818408-CDS-Ecto-sp13_S_contig6311:2701..3086Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6311 2702..3086 -
1681463875.8363733-CDS-Ecto-sp13_S_contig6311:3405..35011681463875.8363733-CDS-Ecto-sp13_S_contig6311:3405..3501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6311 3406..3501 -
1681463875.8497612-CDS-Ecto-sp13_S_contig6311:6108..64091681463875.8497612-CDS-Ecto-sp13_S_contig6311:6108..6409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6311 6109..6409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6311.17054.1

>prot_Ecto-sp13_S_contig6311.17054.1 ID=prot_Ecto-sp13_S_contig6311.17054.1|Name=mRNA_Ecto-sp13_S_contig6311.17054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp
MLGKVWILPLYAVITTIFRAPFASCQSCGCGGPTSAAKDTGSIDVLQCGD
DGGGECGDKVCVCNYGVSIEVDIVAFLAGTATEPTISWYCEHDGGDGYCT
NCETSSECDEDIGEICCPETGLCSVPDAAGACGDPHMTGFLGQKFDFVGQ
DGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGVGIKTIDAEGLDHSI
VITVTDPRSLDSACPVKGSTCLADGALTIELDGEVALLAPGEVELGPNVA
ISAVNLPGSCRSFGFEKYWERKKAEYAASGRKLNDFSQMQKMSDWILGDP
TATNMAECTEYVLGATVDGQAGLLDHESEHTSFQISTPKGSIRLSHGRLH
QLAMRDPTDRFDIPEHLTWQMNLAFDNVDLALDATGILGETQQHTFDANG
NPIMEGMAAIRGSQEDYLVEGPLDTLFAAARNHP*
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mRNA from alignment at Ecto-sp13_S_contig6311:1520..6441-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6311.17054.1 ID=mRNA_Ecto-sp13_S_contig6311.17054.1|Name=mRNA_Ecto-sp13_S_contig6311.17054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4922bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6311:1520..6441- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGAAGGGGAAGAAAAAATACACCCCAGCAAGATGTTGGGAAAAGTCTGG ATCCTGCCGCTGTACGCGGTGATCACGACCATCTTCAGGGCGCCATTCGC CTCCTGCCAATCTTGCGGTTGTGGGGGACCGACCTCTGCTGCAAAGGACA CGGGAAGTATCGACGTGTTGCAGTGCGGCGATGATGGGGGTGGTGAATGC GGCGACAAGGTCTGCGTTTGCAACTACGGCGTTTCGATTGAAGTGGACAT AGTCGCCTTCCTCGCCGGCACCGCCACGGAGCCCACCATATCGTGGTACT GCGAACACGACGGCGGCGATGGCTACTGCACAAGTGAGGATTTATATTCT GGAACAACTGACACCGACCACTCAAAATGAAAAGTCTTCGATGAATGAAT GCCCAAGCGTTTGACGAGAACCGTTCGCTACGAGCGTGAAGAAGATCGAT TGGATACTCTCGTAGTACTGTCCTTGCTACCCCTTCGGAGACTTTGCTCA TCCGTACGTTGGGGCCCACAATTGATGACCACGTCATTTGCCGAAAAGGA AGATTATTTATAGATTTGCAACAAGTTCAAAAAGTAAAAAGCAAATTTAA CAATGCTCAGTCCCCTAAGTCGGGTCCAAAGATAGGGTAGCGGTCAGCTG CTTTTTTTTCTTCGGATTAAACTGAATCTTCAATTTTCTTAAGGCCATAT CTCCAGGTTCACAATTAACTCTTTCCGCTCTCTAATTTGGATGGCTCTTA GTTTGCGAGTTGATAAGAGATTGAACGACATCATGGCGGTTTCGCTATTT TTCCTCTTGTTCCTGTTTTTTTAGTTCATGTGTTGATGTGAACAACCCAT CGTTGACCTCGGGGAAAAGAAAATATTGTCGATCGAGGCATATTATTGGA AGTGCTTTGTCTAAAATATTCCCCGAAGACAAACGTCAGGTGCCGGTGTC TTGAAATGGAAATGTAGGACTGCTGGACAATTCACGGTCGGGGTAGGCCA GGTCGTCTATTCTCTAAGGTATGGGCGCCTATATATTTCATAAAGCACAC AACGCGATATTGGCGCAGAGCCGATACAAACAAACCGGAAGTCAGTACTT GGCGTGTCGCTGACTTGCTTGTGTTTTTGCTTCCCATAGCCCTCCACATT TACAACGCTACTATCTGTTCCGTTGTGACTGGTGGATATTCACGAAGCTT GACCAAGACTGCGACTGATGTTCAATGAGTCGTTCACATATAGTATGAAG TAGATGAACACGTTAAAGTACAAATCAGGCTAAGTGACTGATAGTTAGAC GTGAGGACGATAAGTGATGTGCCGCCGTCGTGAAAGGTTTAACAGAATCT TCTCCGCGTCGTTAATCGATTTCATACGACACCATTTCGACACACCCGCT TTTCGGATCGCTGAAGCATGCATGCAAGCATATCCTTTATATTTGTGCGC CGTTTGCCGAGATTCGTCCGCCCCTCCTGCTCAAGACCGACGGAAACTGT GGTTTCGTCTTATGGACCCTCCTACATCTAAAGGCACAGCTCTCCTTCGT AGGTACCCAACCTGTTTGTCGAGTACTTTATTTCGAACAGTCGAAAAGCG TGGGAAAAAAGCTAAAAGCGCAGCTTATCCTGCTCGCCAAGTCGCTTGTC GTTTTCACCCTTCGGCGGTCTAAAGTTGCCCATTGTGAGGGTTCACTTTG AAGCATACATGTCAGCTGCTCCGTACTCCGTGCAGATTTGCCGTGCAAAG ATGGAAAAGCAAATAGGGCACAACAACACCTTTCAACGCAGAGGCTTATC ATTGTTACCTTTTTCGATAACACCGTTTGGTTGCATGAAGGGACTTCGCG CGAAAAAAATACCGGACACAGATACCACACCCCCCGCCCTCACCGTGGGG GGGAGACATCCGAAACATTGCCACAAATCGTCGAAAAGAAAACACGAGGT AGATCGATTGCAAGCATCCCTCGCCCTCGTTGTCCCGTCCGCATCTGCTC GTCGTCCACCGTTGGCTGACGCCCTTCCAGCCGTGCTACGGGGACACACG TACAAAAGCGCCGAAAATTCTTCCATAACAGTACAGTTTATCCGTCAAAG TCCGACATGATGAGCGAAGCAGGTCACAGCACACAACCATCTAACGAGCC TCAACCCAACAACTTGCCCTTGCCTCTACTAATGCTAGTACTGTTCAAAA TGGAACTTGGTCTCGCGAATCTTCTCGCAGCTTCGGTCGTGTCGGGTTGC GTTTGAGTTGACCAATCTACTTTTACCCATATGGACCCCCCCTTGCGAGT TCTCGAGCGGTGACCTCTCCCTCCCTGCGAGAGAGACGTTATGTGTAAGG GAAGGGTTGAAGTTCGGGTTAGAGAGACGGATGCCAACATTTCGATACTG GAGTTAAACCCGGAGATACATGGGTATATGTCCCCGCCTTCCCCCAAAAG ACCCCCCCCCCCACTGGTGGAGATGTCCGATAACTAGGCCCATGTTTAGG TTTGTCTTTCGCTCATACCTCTGGGTGAAACCTTTATCATACACCTTAAA ATGACCTTGCCATCTTTTTACTATGACGGTGTGATGAAGAGGTCATTGAT TTAGGAATTCATGCAATGCTTGGAAACCAGCAAGGCAATAAACAACAAAA AGTAGAAGTCTGATCGAATTGAGTTAATTCAGGCTTAGTTTGCACCCCTA CGCAACAACATGTCTTTTCGACGCAAACGCAGACCAGGAAATTAATAGTC CTCCAAATGAGGGGTAAGCAGCCATCGCATGGCAATACCAGTGTTTGTTA CGTCATGTCGCAGGAAAAATGGATCTGTTTCGGCCGTTGATCCCGCCAAT ATGCCCCGCCCGTTTTCGCTGTCTTGCGTTATCCATTAATTGACTCCTGC CCTTCTCGTTGGCTGCTACGTTTGGTGTCCACACGTTCAGACTGTGAGAC CAGCTCCGAATGCGATGAAGATATTGGGGAAATCTGTTGTCCGGAAACTG GGCTTTGCTCGGTTCCCGACGCAGCCGGCGCTTGTGGTGAGAAAACACAA AATGTACAACTTTGGATTTTACGATAGTATGCTAGGCGAGCCATGGCAAT TGTCCCTCTGGTTGAGAAGGAAACACATATGAATGCATTCCGGTAGGTCC GGGAAAAAGATTACTGCCTATGTCCGCTGAATATTTTTTTACTTTGCTGT CACCGACCTTACTGCCGAGACTATTTCTGTCGTGAGATCCGACAAGGAAG CAGGATGAGTTCCAAAGATGAAATCACGATGTCTTGCCGCCGTTGGGAGG GCCATGTGCAGCAGTGTCAAACCGATAACATTTTGAAGTCGTTCCTCCCT CTCAGGTGATCCGCACATGACCGGCTTCCTTGGCCAAAAATTCGACTTCG TTGGGCAGGACGGTGAATGGTATGCCGTAGTTTCGGATATGCCGGATCTT GAGGTCAACATGCGCGTGACATCCCCCGTTCCTGCCGAGCCCGAGATTAC CTACATCACAGGGGTCGGTATCAAGACTATCGACGCCGAGGGACTGGACC ACTCCATCGTTATCACGGTCACGGACCCCCGCAGCCTAGACAGCGCCTGT CCCGTGAAGGGATCAACTTGTCTGGCGGACGGCGCCCTGACTATTGAACT TGATGGTGAAGTCGCTCTATTGGCTCCTGGAGAGGTCGAGCTTGGACCGA ACGTGGCAATCTCTGCGGTCAACCTTCCGGGCTCTTGCAGGTAATTCTGA CGACAAGCTCGTTTCATGAAACCCGTCGCAACTATGTACACGTCAATCTG TACCCGCCGACAATATCCTGTGCAGTGCAGGCGAAAAAAAATGAACGAAG AGAAGCAGCTTGCCCTCGTTGCCCAGAGCTTAAGCGCTGTGTATTTCTTT TATCAAAAATGCTTTCGTTGATCCATTCAGGTCTTTCGGGTTCGAGAAGT ACTGGGAGCGCAAGAAAGCAGAGTACGCGGCCAGCGGCCGAAAGCTCAAC GACTTCTCGCAAATGCAGAAGATGTCGGATTGGATCCTTGGCGACCCTAC CGCAACCAACATGGCCGAGTGCACGGAATACGTGTTGGGTGCGACGGTAG ACGGCCAGGCCGGATTGCTCGACCATGAATCGGAACACACGTCGTTCCAA ATCTCGACTCCGAAGGGAAGCATCCGTCTCAGCCACGGCCGCCTCCACCA GCTCGCCATGCGTGATCCGACGGACAGGTTCGATATCCCGGAACACCTCA CGTGGCAAATGAACCTCGCCTTTGACAACGTTGACCTGGCTCTGGACGCG ACGGGTATCCTCGGCGAGACGCAGCAGCACACTTTTGACGCCAACGGCAA CCCCATCATGGAGGGGATGGCTGCTATCCGTGGGTCGCAGGAAGACTGTG AGTACAATGGTCTCGGGGATGGATTTGCCGCTGGGTTCTAAAATGATAGC AAAGGGACAGTTGCAGGGAAAGTAGACAGCACGACAGCACTGTGTTTGAC AACTTTGTTGGCGTCGTGGTATTGACACGAAATAGAGATGCGGCGGGAGT CACGCGTCTTGGGTTAATCGTGATTGTTTCGCTTGATGTTGCCCTCGATT GAACGACGGTGTTGAGGCTGATCGTTGGTGCTCTAAGAAAACCCATGTTC CTTTGACTACCTTCGTTTAATCACGTCATGCGTGCAAGAAGAAGCCACCC TGTTGCTTGTTTTCGATGAAACGCCCACAACCTTGACATGTCTTCCCCCG GATGTTGACGTTGTGCATGTACCGATTTGAAATTCACGCAGACCTTGTTG AGGGCCCCCTGGACACCTTGTTCGCCGCAGCCCGCAATCACCCTTAGGTC CCCGTCGGCCAAACTAAGGGAACTGGGTTGCTCCGCAACTACGCGACAAT TTGTTGACCTGTTGTGTCTCCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6311:1520..6441-

>mRNA_Ecto-sp13_S_contig6311.17054.1 ID=mRNA_Ecto-sp13_S_contig6311.17054.1|Name=mRNA_Ecto-sp13_S_contig6311.17054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6311:1520..6441- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGGGAAAAGTCTGGATCCTGCCGCTGTACGCGGTGATCACGACCAT
CTTCAGGGCGCCATTCGCCTCCTGCCAATCTTGCGGTTGTGGGGGACCGA
CCTCTGCTGCAAAGGACACGGGAAGTATCGACGTGTTGCAGTGCGGCGAT
GATGGGGGTGGTGAATGCGGCGACAAGGTCTGCGTTTGCAACTACGGCGT
TTCGATTGAAGTGGACATAGTCGCCTTCCTCGCCGGCACCGCCACGGAGC
CCACCATATCGTGGTACTGCGAACACGACGGCGGCGATGGCTACTGCACA
AACTGTGAGACCAGCTCCGAATGCGATGAAGATATTGGGGAAATCTGTTG
TCCGGAAACTGGGCTTTGCTCGGTTCCCGACGCAGCCGGCGCTTGTGGTG
ATCCGCACATGACCGGCTTCCTTGGCCAAAAATTCGACTTCGTTGGGCAG
GACGGTGAATGGTATGCCGTAGTTTCGGATATGCCGGATCTTGAGGTCAA
CATGCGCGTGACATCCCCCGTTCCTGCCGAGCCCGAGATTACCTACATCA
CAGGGGTCGGTATCAAGACTATCGACGCCGAGGGACTGGACCACTCCATC
GTTATCACGGTCACGGACCCCCGCAGCCTAGACAGCGCCTGTCCCGTGAA
GGGATCAACTTGTCTGGCGGACGGCGCCCTGACTATTGAACTTGATGGTG
AAGTCGCTCTATTGGCTCCTGGAGAGGTCGAGCTTGGACCGAACGTGGCA
ATCTCTGCGGTCAACCTTCCGGGCTCTTGCAGGTCTTTCGGGTTCGAGAA
GTACTGGGAGCGCAAGAAAGCAGAGTACGCGGCCAGCGGCCGAAAGCTCA
ACGACTTCTCGCAAATGCAGAAGATGTCGGATTGGATCCTTGGCGACCCT
ACCGCAACCAACATGGCCGAGTGCACGGAATACGTGTTGGGTGCGACGGT
AGACGGCCAGGCCGGATTGCTCGACCATGAATCGGAACACACGTCGTTCC
AAATCTCGACTCCGAAGGGAAGCATCCGTCTCAGCCACGGCCGCCTCCAC
CAGCTCGCCATGCGTGATCCGACGGACAGGTTCGATATCCCGGAACACCT
CACGTGGCAAATGAACCTCGCCTTTGACAACGTTGACCTGGCTCTGGACG
CGACGGGTATCCTCGGCGAGACGCAGCAGCACACTTTTGACGCCAACGGC
AACCCCATCATGGAGGGGATGGCTGCTATCCGTGGGTCGCAGGAAGACTA
CCTTGTTGAGGGCCCCCTGGACACCTTGTTCGCCGCAGCCCGCAATCACC
CTTAG
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