mRNA_Ecto-sp13_S_contig626.16986.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A6H5LMX6_9PHAE (DUF676 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMX6_9PHAE) HSP 1 Score: 779 bits (2012), Expect = 6.500e-281 Identity = 447/480 (93.12%), Postives = 456/480 (95.00%), Query Frame = 2
Query: 2 LVPVAASPMSATPXXXXXXXXXVIRAAKPDGTDATEAGSERTHLPPSALAADATTAAAPASDTKVGDKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXX--AAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAAALAAGTESFTFADRLLGAKNAAIVGVSHVSAAGAAA----RSDSDSGVGDRAGGAKKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRETR 1423
LVPVAASPMSATP XXXXX V RAAKPDGTDATEAGSER+HLPP ALAADATTAAAPA+D KV DKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEI EVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGG+SGTGATVAGLSPSVF+TIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRK+ G XXXXXXXXXXXXXX AAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRD AKTGEEEQEQDVSESDAVVSRGVSSPPDGAAA+LAAGTESFTFADR LGAKNAAIVGVS V AAGAA RSD+DSG+GDRAGGA KEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRET+
Sbjct: 25 LVPVAASPMSATPPXXXXXVAAVSRAAKPDGTDATEAGSERSHLPPLALAADATTAAAPAADKKVDDKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEIREVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGDSGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKKVGXXXXXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDDAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAASLAAGTESFTFADRWLGAKNAAIVGVSRVPAAGAAXXXXXRSDTDSGMGDRAGGANKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRETK 504
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: D7G287_ECTSI (Putative serine esterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G287_ECTSI) HSP 1 Score: 739 bits (1908), Expect = 2.240e-265 Identity = 436/486 (89.71%), Postives = 442/486 (90.95%), Query Frame = 2
Query: 26 MSATPXXXXXXXXXVIRAAKPDGTDATEAGSERTHLPPSALAADATTAAAPASDTKVGDKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXA---AKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEQ-EQDVSESDAVVSRGVSSPPDGAAAALAAGTESFTFADRLLGAKNAAIVGVSHVSAAGAAA-----RSDSDSGVGDRAGGAKKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRETRDDDDDDRGNPS 1456
MSATPXXXXXXXXXV RAAKPD DAT AGSER HLP TAAAP DTKV DKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLY RYAAKLLYRDETTGG+ GTGATVAGLSPSVF+TIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRK+GG XXXXXXXXXXXXXX AKDGRENSLLYNMATT+DFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEE+ EQDVSESDAVVSRGVSSPPDGAAAALA GTESFTFADRLLGAKNAAIVGVS VSAAG R+DSDSGVGDRAG AKKEEA RKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRET D DRGNPS
Sbjct: 1 MSATPXXXXXXXXXVTRAAKPDVADATVAGSERPHLPXXXXXXXXXTAAAPGVDTKVDDKGLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYVRYAAKLLYRDETTGGDGGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKKGGXXXXXXXXXXXXXXXXXXXXAKDGRENSLLYNMATTKDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEEXEQDVSESDAVVSRGVSSPPDGAAAALADGTESFTFADRLLGAKNAAIVGVSRVSAAGXXXXXXXXRTDSDSGVGDRAGAAKKEEALTRKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRETNDXXXXDRGNPS 486
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: L1J7J1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7J1_GUITC) HSP 1 Score: 230 bits (587), Expect = 1.260e-63 Identity = 154/374 (41.18%), Postives = 195/374 (52.14%), Query Frame = 2
Query: 212 PAHLVVLAHGLSGTPEDLTYLKQSLEREGGS--EILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAAALAAGTESFTFADRLLGAKNAAIVGVSHVSAAGAAARSDSDSGVGDRAGGAKKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICAL 1327
P HL+VL HGL+GT +DL YLK+S++ + G+ LV+ A+ NE KT+DGV GG RLA+EI+E+V+ PSL RIS VGNSLGGLY+RYA +L+R+ GG V GL P F+T ATPHLGVRRFTY+P+P LH LA VFVG+TG DLF+ KE G E LL M+T E FLR L++F RRAYAN GDF+VP+GTAAF+ D GR G E+ +D + SR + + + E +DR+ A+ + E MA LNSCGW KV V F P +HNKICAL
Sbjct: 157 PEHLIVLVHGLAGTADDLAYLKRSVDSQDGTLKNTLVYLAKCNEDKTRDGVEAGGWRLAKEIVELVEEVPSLQRISFVGNSLGGLYSRYAIAVLHREG--GGGRQEEDLVCGLKPDTFVTTATPHLGVRRFTYLPIPDQLHGLAPVFVGRTGDDLFMLGKE----------------------GDEPPLLLLMSTCEVFLRGLRSFSRRRAYANLEGDFLVPFGTAAFMVED----------GRAGWGILEKGTSEDFEKK----SRRILNQSQVVCEMMVDAHEEQVSSDRI--------------------------------------RSANGKSDSEALMATALNSCGWSKVGVRFSSPLPLAHNKICAL 454
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A4D9CXB7_9STRA (DUF676 domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXB7_9STRA) HSP 1 Score: 216 bits (549), Expect = 9.660e-62 Identity = 174/424 (41.04%), Postives = 216/424 (50.94%), Query Frame = 2
Query: 170 AAPASDTKVGDKGLP--AHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFL-SRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAAALAAGTESFTFADRLLGAKNA--AIVGVSHVSAAGAAARSDSDSGVGDRAGGAKKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRETRD 1426
A+PAS T + +P HL V+ HGL G P DLTYL ++ G IL H A N KT DGVV+GG RLA EI EVV + PSL IS +GNSLGG+Y+RYA LL+ T TV GL P F++IATPHLGVRRFT VP+P +H +F+G+TG+DL L SR EG E LL MA + FL PL AFR R AY N + D +VP GTA F P +G TG +E V PDGA + + A G K+ + G S V A R S V AGGA ++++ R ME MAA LN+ GWEKV+V F +HN ICALSR +TT L+ G+ V+DHAAA + + E D
Sbjct: 11 ASPASSTSIPVNSVPEPTHLAVVVHGLHGRPADLTYLGNAIGSRGQGRILPHLAHCNLHKTMDGVVKGGERLAAEIKEVVAAHPSLRAISFIGNSLGGVYSRYALSLLWEPRTR--------TVLGLKPITFMSIATPHLGVRRFTVVPVPDLVHVATPLFIGQTGNDLILRSRGEG-----------------------ETPLLLEMAQSTKFLEPLAAFRHRCAYGNVKEDLLVPIGTALFHP---------GPESMEG--TGHILKETVVL-------------PDGAREDVRMEVFAMPPAPWEDGLKDVEGVVQGASPVMKERADGRGRLAS-VPAVAGGAVSDDSN-RDWMEPRMAAQLNALGWEKVAVAFRTPFFSAHNMICALSRDPLTTFLFRKGQGVMDHAAARIARGAAEEDD 377
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A7S1HTD2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HTD2_9EUGL) HSP 1 Score: 182 bits (462), Expect = 7.890e-51 Identity = 117/237 (49.37%), Postives = 135/237 (56.96%), Query Frame = 2
Query: 245 SGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTG 955
SGT DL +L +E E LV +AR NEG+TKDGV GG RLA EI E ++ PSL +ISLVGNSLGGLY RY AKLLY T T+AGL P +T+A PHLG+R FT+VP+PSPL LA V VG+TG DLFL +D R LL MAT ++L PL AFR R +AN GDFMVPYGTAA DAS GR GA G
Sbjct: 1 SGTAHDLHFLAGRIEAESPG-ALVLAARSNEGRTKDGVAAGGERLAAEIRECIRQYPSLQQISLVGNSLGGLYVRYTAKLLY--------DPTSRTIAGLQPRTLMTLACPHLGIRGFTFVPVPSPLQPLARVLVGQTGDDLFL------------------------RDRRR--LLATMATDREYLEPLAAFRNRILFANVEGDFMVPYGTAAI---------DASREGRPGAWDG 193
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: R1BBJ2_EMIHU (DUF676 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBJ2_EMIHU) HSP 1 Score: 179 bits (453), Expect = 4.650e-48 Identity = 150/406 (36.95%), Postives = 183/406 (45.07%), Query Frame = 2
Query: 212 PAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTED-FLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAAALAAGTESFTFADRLLGAKNAAIVGVSHVSAAGAAARSDSDSGVGDRAGGAKKEEAHARKSMEEEMAAGLNSCGWEKVSVDF---GGVAPFSHNKICALSRTAITTALYG-----SGRSVVDHAAAFLV 1402
P HLVVL HGL G +L L+Q L GG +LVH A NEG T+DGV GG RLA EI V S PSL +SLVGNSLGGLY R AA LY G G GL+P+ +T PHLGVRR+TY+PLP LHSL G+ G+T DL L R + D R LL MA + + L++F+ RR YAN RGDFMVP+GTAA +G A G DG A A F D + A +GV R + + EE EEEM AGL++ W+KV V F G + P +HNK+ AL R A G V++ AA F+V
Sbjct: 12 PDHLVVLQHGLYGGASNLAVLRQCLVGIGGDNVLVHLASANEGMTRDGVAAGGRRLAAEIRSVAASAPSLESLSLVGNSLGGLYVRAAAAELY---------GGGQQELGLAPNTLVTTGCPHLGVRRYTYLPLPPALHSLGGLVAGRTASDLLLRRTDA--------------------DPRR-PLLVEMADPDSRYGVALRSFQRRRLYANLRGDFMVPFGTAAIE------------TGGWAAGVG-----------------------DGRLVARFAARRDVVFRDVEVCGGRADGIGVV------CEQRQE------------RAEEGAEGAEWEEEMRAGLSAVAWDKVGVSFRAAGTLTPLAHNKLPALRREGWRRAFEWVEQAQEGVPVMEDAARFVV 334
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A7S4G3V3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G3V3_9EUGL) HSP 1 Score: 174 bits (442), Expect = 8.200e-47 Identity = 103/226 (45.58%), Postives = 134/226 (59.29%), Query Frame = 2
Query: 218 HLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENS--LLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAF 889
HL+VL+HGL+G P +L L++ L + + V +A N+G T DGV GG RLA+EI V PSL ISLVG SLGGLY RYAA+LLY +T T+AGL P +T+A+PHLGVR+FT++P+P P+H L + + +TG DLFL +DGR + LL MAT +FL PL AF+ R A+AN GD +VPYGTAA
Sbjct: 14 HLMVLSHGLTGAPHNLAVLQRELLQRSPC-LQVLNAASNQGHTLDGVAAGGERLAKEIEACVGRHPSLVHISLVGYSLGGLYVRYAARLLYNPKTN--------TIAGLQPRTLLTLASPHLGVRKFTWLPIPRPIHPLIPLLLRQTGSDLFL------------------------RDGRRRTAPLLLRMATLPEFLEPLAAFQQRVAFANLAGDLLVPYGTAAL 206
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A813D472_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D472_POLGL) HSP 1 Score: 171 bits (434), Expect = 2.430e-46 Identity = 112/241 (46.47%), Postives = 137/241 (56.85%), Query Frame = 2
Query: 206 GLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFM----VPYGTAAFVEPDEGDGS 916
G P HLVVL HGLSGT DL L L++ ++LVHSA N G+T DGV GG RLAEEI V P++ +SLVGNSLGGLYAR+AA L+ SG G T+AGL P+ F++I PHLG+RRFT++P+P LH + VG+TG DLFL E A GR F R L+AFR R YAN GDFM VP+GTAA +EP+ G G+
Sbjct: 34 GSPTHLVVLQHGLSGTVADLNRLGAELQQ-ACPDVLVHSATSNFGRTTDGVAAGGLRLAEEIRAVAAQHPTVCELSLVGNSLGGLYARFAAGELWAA------SGDGETLAGLRPATFVSIGCPHLGIRRFTFLPVPDVLHGASRAVVGRTGEDLFLLGSE------------PLLPKMAEPGGR-------------FDRGLRAFRRRGLYANLWGDFMAPWAVPFGTAA-LEPEWGPGA 241
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A7S2SR01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR01_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.660e-46 Identity = 108/233 (46.35%), Postives = 137/233 (58.80%), Query Frame = 2
Query: 206 GLPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYAR-YAAKLLYR---DETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLH-SLAGVFVGKTGHDLFLSRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAF 889
G P HLVVL HGLSGT EDL YL LE IL H R NEG+T+DGVV G +R+ E+ +V + PSLS IS VGNSLGG+Y R A+LL +E+T G T+AGL+P+ +TIATPHLGVR FTYV LPS L +++ + G++G DLFL E + LL+ MAT+ +L L++F+ RRAY GDFMVP+ TA F
Sbjct: 56 GEPRHLVVLVHGLSGTAEDLAYLGGLLEVH--PSILSHRTRANEGRTRDGVVAGAARVEREVRTLVAAHPSLSTISFVGNSLGGIYVREVVARLLDSPSVEESTLGARPAPRTLAGLTPAALLTIATPHLGVRSFTYVQLPSVLRRAVSDLLAGQSGRDLFLEDAE-----------------------QSRPLLWRMATSRRYLDALRSFQVRRAYGAAAGDFMVPFSTALF 263
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Match: A0A7S2G913_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G913_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.830e-45 Identity = 103/226 (45.58%), Postives = 134/226 (59.29%), Query Frame = 2
Query: 257 EDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGNSGTGATVAGLSPSVFITIATPHLGVRRFTYVPLPSPLHSLAG-VFVGKTGHDLFL----SRKEGGGGXXXXXXXXXXXXXXAAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSD 919
EDL YLK++L+ + G ++LVHS R NEG T+DG+ GGSR+A+EI+++V L +SLVGNSLGGLYAR A L D++TG G + P F TIATPHLGV RFTYVPLP +A +F G TG +LFL ++KE G + R+ LL+ MAT+ F PL+AFR RRA N GDF+VP+ T+ F D+ G D
Sbjct: 2 EDLAYLKKTLQEQ-GEDVLVHSVRSNEGLTRDGIEAGGSRVADEIVKIVTEHKGLEHLSLVGNSLGGLYARAALSYLDFDQSTGTLCG-----GAVRPHTFCTIATPHLGVSRFTYVPLPMVARRIAAKLFAGLTGEELFLMDDVTKKERG------------------RQTRQTPLLWEMATSPTFRNPLQAFRRRRAIGNLEGDFLVPFATSLFNVSDDATGGD 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig626.16986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig626.16986.1 >prot_Ecto-sp13_S_contig626.16986.1 ID=prot_Ecto-sp13_S_contig626.16986.1|Name=mRNA_Ecto-sp13_S_contig626.16986.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp MSATPPPPPPTAAAVIRAAKPDGTDATEAGSERTHLPPSALAADATTAAAback to top mRNA from alignment at Ecto-sp13_S_contig626:10558..14070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig626.16986.1 ID=mRNA_Ecto-sp13_S_contig626.16986.1|Name=mRNA_Ecto-sp13_S_contig626.16986.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3513bp|location=Sequence derived from alignment at Ecto-sp13_S_contig626:10558..14070+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig626:10558..14070+ >mRNA_Ecto-sp13_S_contig626.16986.1 ID=mRNA_Ecto-sp13_S_contig626.16986.1|Name=mRNA_Ecto-sp13_S_contig626.16986.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig626:10558..14070+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |