mRNA_Ecto-sp13_S_contig626.16985.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI) HSP 1 Score: 1221 bits (3159), Expect = 0.000e+0 Identity = 743/858 (86.60%), Postives = 760/858 (88.58%), Query Frame = 1
Query: 1 MSKTATPIATAAATXXXXXXXXXXXXDARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELIIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSS-LKAATVAAGARSSNSAEDAADGAGSGRRPIKIAVESSTTTGSRDVSASLAAPAATGGSECVVAGAAHQSGLPTKASGPPRSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLEGQXXXXXXXXXXXXXXXXXXXXXXXHAEQRQPYDGSTSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGVRLFDESGRRFTPPGGSHEAEANPPPDSGPSAAHXXXXXXXXXXXXXXXXXXXXGGIKAASTGADRGPTKQGAACFSAPGTAASSLLTVTMERGTAEEAPRAVWLGRVAAVMEARGDRDEAVRLYGEAAAELTGKREGASRNGSRDGGGGTASSCPSVAGKGRSAQLGGGDGGVGARAGPDLFPYSARAHYLASIIERSYRRRFVRHVTFPSETERTAAQTLAAAAFRGYLARVGARKDKTHLSSAATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGRLQALQRGFILRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLTTDAGKAELAQEMRRAKAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAITDTELK 2571
MSKTATPIATAA XXXXXXXXXXXX ARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWREL+IGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSS LKA TVAAGAR++NSAEDAADGAGSGRRPIKIAVESS TTGSRDVS+SLAAPAATGG +CVVAGAAHQ GLPTKASGPP SDQ XXXXXXXXXXX AFLE QXXXXXXXXXXXXXXXXXX AE+ QP DGS SAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEG RLFDESGRRFTPPGGSHEAEAN PPD+ PSAAH XXXXX G IKAA TGA RGPT QGAAC SAPGTAASSLLTVTMERGTAEEAPRAVWLG+VAAVMEARGDRDEAVRLYGEAAAELTGKREGASR GSRDG GGTAS CP AGKGRSAQLGGGD GVGA AGPDLFPYSARAHYLASIIER+YRR F+R RTAAQTLAAAAFRG+LARVGARKDKTH SSAATFVARAWRRRMYRLGLATVKFQA++RGAHGRRKARE R+LIRHTISAQSVVRMFLAKRT QRMRLEEASAG LQAL RGF+LRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFA MVRQFAVDGEITR EAEAAAVGGAVRL TTR DMYLTTDAGK ELAQEMRRAKAA VRTKI+MRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGV IT+ ELK
Sbjct: 1 MSKTATPIATAAXXXXXXXXXXXXXXXARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSSSLKAVTVAAGARATNSAEDAADGAGSGRRPIKIAVESSATTGSRDVSSSLAAPAATGGGDCVVAGAAHQRGLPTKASGPPYSDQQQQHASRPKRQRGXXXXXXXXXXXERRNGERSRRRLAAFLEDQXXXXXXXXXXXXXXXXXX-----RAEEGQPCDGSNSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTPPGGSHEAEANLPPDNEPSAAHATSPDGRKKKTAXXXXXTTSG-IKAAPTGAGRGPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKREGASRIGSRDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLR---------RTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISAQSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVGITNAELK 843
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A067C2L8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2L8_SAPPC) HSP 1 Score: 72.8 bits (177), Expect = 2.790e-9 Identity = 79/251 (31.47%), Postives = 117/251 (46.61%), Query Frame = 1
Query: 1876 ATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMF---LAKRTAQRMRLEEASAGRLQALQRGFILRRVR-ATAISEIHTSLW--------------RAALGLNRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLTT--DAGKAELAQEMRRAKAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAITDTEL 2568
A+ + +RRR R A ++ Q V RG H RR+ + R L SA + R + A + A R+RL+ A+ +L L ++RR+R A + W RAA + R+ RGFL RR +R V E+ RS EA + R T R++ +L AG++ + Q +R K A K +P RRA+ D+F S+D+DGSGTID EL+ L L + + L
Sbjct: 381 ASLLQMRYRRRHLRRARAALRLQTVWRGFHDRRRFK--RRLWHRQASALYIQRWWHVRTADKEAMRLRLQTAARRKLAYL----LVRRMRKAHKVLRASIHAWLVCALARLRLRRAIRAATNIQRLVRGFLSRRAVLRLRDRIVRDEVARSSREADYIQ---RFTAIRLEDFLLFLHQAGQSHVHQLAQRLKDEATARKRARAHWAPAAMRRAALEDLFASYDVDGSGTIDVDELQHLFDELCIPMDAASL 622
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A1V9YLD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLD2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.370e-9 Identity = 80/245 (32.65%), Postives = 118/245 (48.16%), Query Frame = 1
Query: 1876 ATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHT-ISAQSVVRMFLAKRTAQRMRLEEASAGRLQALQRGFILRRVRATAISEIHTSLW------RAALGLNR--------VARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRV---DMYLTTDAGKA---ELAQEMRRAKAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGV 2547
AT + +RRR R AT + Q RG H RR R L + + + Q + A + A R+R++ A+ +L L+ ++R RAT LW R LG V RGFL RR R +R+ E+TR E A + R +T R+ ++YL +AG +LA++++ A R+++ +P + RRA DVF S+D+DGSGTID ELK L LG+
Sbjct: 382 ATTIQMLYRRRHRRRVRATWRLQTAWRGFHARRAYARRRWLRQESAVYIQRWWHVHTADKEAMRLRIQTAARRKLARLR---VVRLHRATKCLHKWVRLWLVRALARIRLGXXXXXXXXXXXVVRGFLGRRRVRWLRKVIAADEVTRLTQEEAYIE---RFSTIRLKDFNLYLA-EAGVRRVRDLAKKLKADDALRARSRVHW---TPTQLRRARLQDVFASYDMDGSGTIDADELKPLFDELGI 616
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A6G0WAC7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAC7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.780e-7 Identity = 86/300 (28.67%), Postives = 119/300 (39.67%), Query Frame = 1
Query: 1657 VGARAGPDLFPYSARAHYLASIIERSYRRRFVRHVTFPSETERTAAQTLAAAAFRGYLARVGARKDKTHLSSAATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGRLQALQRGFILRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYL-TTDAGKAELAQEMRRAKAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAI 2553
+GA P F Y AH AS I+R Y RR+ R+ A A +RG+ R K + +A + R W H + RET L Q+ +R LA+ +R LQ L + + ++ A+ H L R RG + R R +++ D E R AE A V + L +T G L++ R KA AV R S +RRRA HDVFD++D+D SGTID EL+ L LG+AI
Sbjct: 338 LGATPAPWGFHYDLSAHKKASTIQRLYHRRY---------RLRSTAAVQVARVWRGFRTRRRLVKARRRADQSAARLQRWW---------------------HRCNRHRETMRL-----RLQTAMRAKLARLHVHALRQRRLLMRNLQLLVKAWRVQHNSLQALRRKHGYAHFCQLTKERWLRGVIARYRVRKLKRALQDEEAARYAAECAFVDLHLEPKLRDFQRLLKSTRGGAMRLSRLALRLKAEAVARDEARRHWSVADRRRAQIHDVFDTYDVDKSGTIDSNELRHLFDELGIAI 602
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A024UUQ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.300e-7 Identity = 75/248 (30.24%), Postives = 113/248 (45.56%), Query Frame = 1
Query: 1885 VARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMFLA---KRTAQRMRLEEASAGRLQAL------QRGFILRRVRATA---ISEIHT-SLWRAALGL--------NRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLTTDAGKAELAQEMRRA----KAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAI 2553
+A+A+R R L A+ Q RG H RR + R L +SA + R + A + A R+R++ A +L Q+ ++R +R + E H+ R LGL +R RG+L R R ++ E RS E A V V + + L + + + L +R KA A+ + P ERRRA DVFD++D+DGSG++D ELK+L LG+AI
Sbjct: 377 MAKAYRHRFSNLIAASTTVQRYYRGFHTRRMLAKKRWLAH--VSAACIQRWWRACNRHKEAMRVRIQTAMRKKLACKKVHVRRQQKKLVRNLRQLVRAWVLEFHSLQKRRRRLGLEQFYALTKDRWLRGYLARYRVRQLKCRLERDEAARSTRERAFVSSNVAVKMATFECQLNSASTTSLLGTRRKRLTLQLKATAIERTAARKHLPPVERRRAQVRDVFDAYDVDGSGSMDSRELKSLFDELGIAI 622
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: W4GL07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GL07_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.350e-5 Identity = 75/255 (29.41%), Postives = 111/255 (43.53%), Query Frame = 1
Query: 1876 ATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMFLA---KRTAQRMRLEEASAGRLQAL------QRGFILRR----VRATAISEIHTSLWRAALG--------LNRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLTTDAGKAELAQEMRRA----KAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAITDTE 2565
AT + +A+RRR R+ A + + RG H RR+ + L SA + R + A + A R+R++ A +L QR ++R V+A + R LG +R RG++ R R +++ E RS E A V + L + + + L R KA A + + PE RRA DVFD++D+DGSGTID TELK+L LG+AI E
Sbjct: 387 ATTIQKAYRRRFGRMNNAIINITRLYRGFHIRRRLAKRLWLTNE--SAACIQRWWHACNLHKEAMRLRIQTAMRVKLARKEVHARRQRKMLVRNLALFVKAWLVGYHSVKQRRLRLGHAQFCAQTKDRWIRGYVARYRVRQLKRRLELDEAARSSRERAYTVTNVAVKMADFQRQLISASKSSVLGARRTRLTLQLKATASQRSDARKHLPPEAFRRAQVRDVFDAYDVDGSGTIDATELKSLFDELGIAIDRRE 639
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A6A5A106_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A106_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.530e-5 Identity = 74/251 (29.48%), Postives = 109/251 (43.43%), Query Frame = 1
Query: 1876 ATFVARAWRRRMYRLGLATVKFQAVMRGAHGRRKARETRVLIRHTISAQSVVRMFLA---KRTAQRMRLEEASAGRLQAL------QRGFILRR----VRATAISEIHTSLWRAALG--------LNRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLTTDAGKAELAQEMRRA----KAAAVRTKIVMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAI 2553
AT + +A+RRR R+ A + RG H RR+ + L SA + R + A + A R+R++ A +L QR ++R V+A + R LG +R RG++ R R +++ E RS E A V + L + + + L R KA A + + PE RRA DVFD++D+DGSGTID TELK+L LG+AI
Sbjct: 396 ATTIQKAYRRRFGRMNNAITNITRLYRGFHIRRRLAKRLWLTNG--SAACIQRWWHACNLHKEAMRLRIQTAMRAKLARKEVHARRQRKMLVRNLALFVKAWLVGYHSVKQRRLRLGHAQFCAQTKDRWIRGYVARYRVRQLKRRLELDEAARSSRERAYTVTNVAVKMADFQRQLISASKSSVLGARRTRLTLQLKATASQRSDARKHLPPEAFRRAQVRDVFDAYDVDGSGTIDATELKSLFDELGIAI 644
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Match: A0A485KZV7_9STRA (Aste57867_13764 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZV7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 8.520e-5 Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 2191 NRVARGFLHRRFARMVRQFAVDGEITRSEAEAAAVGGAVRLTTTRVDMYLT-TDAGKAELAQEMRRAKAAAVRTKIVMRGA--SPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVAI 2553
+R RG+L R+F + +++ V E R AE A + + + L T AG A +++ R K A + + SP E RRA DVFD++D+DGSGTID EL+ L LG+AI
Sbjct: 608 DRWIRGYLARQFVKRLKRRIVLDEAARYAAECAYIDAHCGVKMNAFERSLAATAAGAARVSRLALRLKTDAAHRDVDRKRQRLSPAELRRAQMRDVFDAYDVDGSGTIDTDELRYLFDELGIAI 731 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig626.16985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig626.16985.1 >prot_Ecto-sp13_S_contig626.16985.1 ID=prot_Ecto-sp13_S_contig626.16985.1|Name=mRNA_Ecto-sp13_S_contig626.16985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=857bp MSKTATPIATAAATNAAAKRRRQNDDDARLIKLGRERDLSTAPAWIGFPGback to top mRNA from alignment at Ecto-sp13_S_contig626:628..8817- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig626.16985.1 ID=mRNA_Ecto-sp13_S_contig626.16985.1|Name=mRNA_Ecto-sp13_S_contig626.16985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig626:628..8817- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig626:628..8817- >mRNA_Ecto-sp13_S_contig626.16985.1 ID=mRNA_Ecto-sp13_S_contig626.16985.1|Name=mRNA_Ecto-sp13_S_contig626.16985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2571bp|location=Sequence derived from alignment at Ecto-sp13_S_contig626:628..8817- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |