mRNA_Ecto-sp13_S_contig6246.16975.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 665 bits (1715), Expect = 7.610e-236 Identity = 358/464 (77.16%), Postives = 362/464 (78.02%), Query Frame = 1
Query: 1 RRHMPKGVDSCFGNFPIQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGSDVREKSGVIPGVGARPATAGSYRRSSTYSGSSDVGRSGLAANGAPRMESTTRGRGLSGGTXXXXXXXXXXASVSRSRSFLEVHGSSTVYNMRQQKQQRDSGGDTRTAERRGEGEVPSLASTEKGRKATRVRPKTAGATPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMTSLEVARATNSRPLSAPAGVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESCGP 1392
RRHMPKGVDSCFGNFP+QYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKG SR RD GG+TRTAERRGEG VPSLASTEKGRKATRVRPKTAGA PTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLM SLE ARATNSRPLSAPA VRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGT+DMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVG+LIMETLEVMEQFGGPDAFINIKYMIPTYESCGP
Sbjct: 19 RRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKG--------------------------------------------------------------------------SRQXXXXXXX--------------RDPGGETRTAERRGEGGVPSLASTEKGRKATRVRPKTAGARPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMASLEAARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLEVMEQFGGPDAFINIKYMIPTYESCGP 394
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 397 bits (1020), Expect = 2.520e-131 Identity = 232/460 (50.43%), Postives = 268/460 (58.26%), Query Frame = 1
Query: 13 PKGVDSCFGNFPIQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGSDVREKSGVIPGVGARPATAGSYRRSSTYSGSSDVGRSGLAANGAPRMESTTRGRGLSGGTXXXXXXXXXXASVSRSRSFLEVHGSSTVYNMRQQKQQRDSGGDTRTAERRGEGEVPSLASTEKGRKATRVRPKTAGATPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMTSLEVARATNSRPLSAPAGVRRRRAP--APPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
PKGVDSCFGNFPI YK D WDGNPTLRR R Y SS+ S SS + +S L P+L++T + E+ D EL+ATR YL+T GKF+ +P+KLM +LEVARAT++RPL+AP V RRR PKAGAWRRRAIA TLFR+YY RGDLPI VDH + NAIRWK+R A+LDFHVYLPIFFDGLREVEDP+RFLAVQGTLDM+E APDKVLPVIPQLILP+K+ALNTR P IICP LKILQQMILL+ +GQALVPYYRQ+LP+FNLF+ N+N+GD IDY QRSR+NVGELI+ETLE+MEQFGGPDAFINIKY+IPTYESC
Sbjct: 26 PKGVDSCFGNFPITYKHGDHWDGNPTLRRGMRKRY----------------------------------------SSSSSSSSALVKSRL----------------------------------------------------------------------------PTLSAT--------------------------APIPEEKADLAELQATRQYLMTSGKFKTSPAKLMAALEVARATHTRPLTAPGYVLRRRQADVTAPKAGAWRRRAIAPTLFRRYYERGDLPICVDHRSNGNAIRWKMRAAELDFHVYLPIFFDGLREVEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLELMEQFGGPDAFINIKYLIPTYESC 343
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 289 bits (739), Expect = 2.890e-91 Identity = 139/199 (69.85%), Postives = 163/199 (81.91%), Query Frame = 1
Query: 790 PPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
P KAGA+R R I ATLFR+YY RGDLP+ V+H N+ RW +LD+H+YLPIF DGLRE +DPYRFLAVQGTLDM+ AP+KVLPVIPQ+ILP+K ALNTR P IICP LK+LQQM+L +P++GQALVPYYRQLLP+FNL+R + N+GD I YNQR R NV ELI ETLE++E GGPDAFINIKYMIPTYESC
Sbjct: 2 PDKAGAYRYRPIEATLFRRYYDRGDLPVVVEHRAAGNSTRWTRDLYELDYHIYLPIFVDGLRERDDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLEILEVHGGPDAFINIKYMIPTYESC 200
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0CJS0_PARTE (Uncharacterized protein n=3 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CJS0_PARTE) HSP 1 Score: 274 bits (701), Expect = 5.780e-84 Identity = 131/201 (65.17%), Postives = 161/201 (80.10%), Query Frame = 1
Query: 784 PAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
PAPPKAGA+ +R I+ + FR+YY RGDLPI VDH G N I WKI P LD+H YLPIFFDGLRE DPYRFLA+ GT ++E +K+LPVIPQLI+P+KT LNTR+P I+ LK+LQ+++L M+G+ALVPYYRQLLP+ NL++ NSN+GD I+YNQR R+NVG+LI ETLE+ EQ GG DA+INIKYMIPTYESC
Sbjct: 112 PAPPKAGAYDQRTISVSDFRRYYDRGDLPIKVDHQGSVNRIIWKISPEQLDYHHYLPIFFDGLREKMDPYRFLAILGTYGLLENGGNKILPVIPQLIIPIKTNLNTRDPSIMEVQLKVLQKLVLSGEMVGEALVPYYRQLLPIMNLYKNRNSNLGDFIEYNQRKRVNVGDLIQETLELFEQTGGEDAYINIKYMIPTYESC 312
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 270 bits (690), Expect = 1.810e-82 Identity = 131/199 (65.83%), Postives = 160/199 (80.40%), Query Frame = 1
Query: 790 PPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
PPKAGA+ RR+I ++ FR++Y RGD+PI+V H G N I WK+ LD+H YLPIFFDGLRE DPYRFLA+QG DM+E +KVLPVIPQLI+P+KTALNTR+P IIC LKILQ+++ + MIG+ALVPYYRQ+LP+FN+F+ N+N GD IDY QR R N+GELI ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 105 PPKAGAFNRRSIPSSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKSDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A7S3K833_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3K833_EUPCR) HSP 1 Score: 266 bits (681), Expect = 1.930e-81 Identity = 128/198 (64.65%), Postives = 157/198 (79.29%), Query Frame = 1
Query: 793 PKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
PKAGA ++R I + FRKYY RGDLPI +DH G N I WK A LD H YLP+FF+G+RE+ DPYRFLA+QGT D+++ A KVL VIPQLI+P+KTALNTR+P II TLKI+Q+++L S IG+ALVPYYRQ+LP+FNLF+ NSN GD IDY QR + N+GELI +TLE++E +GG DAFINIKYM PTYESC
Sbjct: 86 PKAGAIKKRKIPISEFRKYYDRGDLPIFIDHMGSGNRIDWKEDIATLDLHHYLPVFFEGIRELNDPYRFLAIQGTYDILDKAGGKVLSVIPQLIIPIKTALNTRDPNIIAVTLKIIQKLVLCSESIGEALVPYYRQILPIFNLFKNYNSNTGDKIDYGQRKKNNLGELIQDTLELLETYGGEDAFINIKYMFPTYESC 283
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A0V0QPM2_PSEPJ (Armadillo-type fold n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QPM2_PSEPJ) HSP 1 Score: 267 bits (683), Expect = 2.810e-81 Identity = 127/202 (62.87%), Postives = 161/202 (79.70%), Query Frame = 1
Query: 781 APAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
AP P +GA+++R I + FR+YY RGDLPI VDH G N I WKI+P LD+H YLPIFFDGLRE DPYRFL++ GT D++E +K+LPVIPQLI+P+K LNTR+P II LK+LQ+++L + MIG+ALVPYYRQ+LP+FN+++ N N+GD IDY+QR +IN+G+LI ETLE+ EQ GG DAFINIKYMIPTYESC
Sbjct: 112 APPKPVSGAFQQRNIIVSDFRRYYDRGDLPIKVDHQGSVNKIIWKIKPEQLDYHHYLPIFFDGLREKIDPYRFLSIMGTNDLLERGENKILPVIPQLIIPIKNGLNTRDPEIISIMLKVLQKLVLSAEMIGEALVPYYRQILPIFNIYKNKNINLGDQIDYSQRKKINLGDLIQETLELFEQTGGEDAFINIKYMIPTYESC 313
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A6A5BPF7_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BPF7_NAEFO) HSP 1 Score: 268 bits (685), Expect = 4.380e-81 Identity = 145/280 (51.79%), Postives = 191/280 (68.21%), Query Frame = 1
Query: 553 VRPKTAGATPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMTSLEVARATNSRPLSAPAGVRRRRAPAPPK---AGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYES 1383
V+P+T + +S + G V + + R LE T +G F +P K+ T A + +R + P PP AGA RR I T FRK+Y RGDLPIS+ H G N I WK++ LD+H YLPIFFDGLRE E+PYRFLAVQGT D+++ DK++ IPQLI+P+KTALNTR+P IIC LK++QQ++L + +G+ALVPYYRQ+LP+FNLF+ N N+GDAI+Y+QR R+N+G+LI ETL+++EQ GG DAFINIKYMIPTYES
Sbjct: 87 VKPQTESSESSSSTKDIGLVGSKMVSSRTSLEKTE-----RGTFAWSPKKVGTG------------GASSSLREGKKPTPPPKPVAGAMERRPIPDTQFRKFYERGDLPISIKHEG-TNEIHWKVKAEKLDYHHYLPIFFDGLREKEEPYRFLAVQGTFDLLKYGKDKIVNCIPQLIIPIKTALNTRDPEIICTVLKVIQQLVLSNNKVGEALVPYYRQILPIFNLFKTQNINLGDAIEYSQRKRLNIGDLIEETLQLLEQEGGEDAFINIKYMIPTYES 348
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A6T7Z7R8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z7R8_9EUKA) HSP 1 Score: 266 bits (681), Expect = 4.740e-81 Identity = 130/200 (65.00%), Postives = 157/200 (78.50%), Query Frame = 1
Query: 790 PPKAGAWRRRAIAA-TLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
PP GA+R RA T FR++Y RGDLPI V+H G N I WK+ LD+H YLPIFFDGLRE E+PYRFLAVQG DM+E K+LPVIPQLI+P+KTALNTR+P IIC LK+LQQM++ MIG+ALVPYYRQ+LP+FNLF+ N+N+GD IDY+Q+ R +G+LI+ETLE+ E GG DAFINIKYMIPTYESC
Sbjct: 109 PPICGAFRERANPPNTEFRRFYERGDLPIQVEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLAVQGVFDMLENGGSKILPVIPQLIIPIKTALNTRDPPIICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNLFKSKNNNLGDGIDYSQQKRKTLGDLIVETLEMFEIHGGEDAFINIKYMIPTYESC 308
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Match: A0A1R2BM68_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BM68_9CILI) HSP 1 Score: 266 bits (680), Expect = 5.510e-81 Identity = 129/200 (64.50%), Postives = 159/200 (79.50%), Query Frame = 1
Query: 787 APPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTLDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1386
APP+AGA+ +R I + FR++Y RGD+PI+V H G N I WK+ LD+H YLPIFFDGLRE DPYRFLA+QG DM+E +KVLPVIPQLI+P+KTALNTR+P IIC LKILQ+++ + MIG+ALVPYYRQ+LP+FN+F+ N+N GD IDY+QR N+GELI ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 104 APPRAGAYNKRNIPPSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKTDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPVKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKHKNANYGDKIDYSQRKHQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6246.16975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6246.16975.1 >prot_Ecto-sp13_S_contig6246.16975.1 ID=prot_Ecto-sp13_S_contig6246.16975.1|Name=mRNA_Ecto-sp13_S_contig6246.16975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=462bp MPKGVDSCFGNFPIQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKback to top mRNA from alignment at Ecto-sp13_S_contig6246:867..8164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6246.16975.1 ID=mRNA_Ecto-sp13_S_contig6246.16975.1|Name=mRNA_Ecto-sp13_S_contig6246.16975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7298bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6246:867..8164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6246:867..8164+ >mRNA_Ecto-sp13_S_contig6246.16975.1 ID=mRNA_Ecto-sp13_S_contig6246.16975.1|Name=mRNA_Ecto-sp13_S_contig6246.16975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1386bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6246:867..8164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |