prot_Ecto-sp13_S_contig6228.16954.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6228.16954.1
Unique Nameprot_Ecto-sp13_S_contig6228.16954.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length438
Homology
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A6H5L5A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A6_9PHAE)

HSP 1 Score: 552 bits (1422), Expect = 1.170e-190
Identity = 294/314 (93.63%), Postives = 301/314 (95.86%), Query Frame = 0
Query:  126 MGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALKSALMEKMRVVGFPVASTPDTRGAAATPALGETPQGGGCHSTAPLNVSGGGGTSSLWPQNQHQ-KSSPLASPSPSSSLPCPPEGNGGLAAFPGNRKVSTTVRIAGGSGGGDRVPIPARPVGVGTYAGVASMLQASAQSMTVANPAPAQPPANAPTPTRAA 438
            MGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGIL NGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQ+KEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQAL +ALMEKMRVVGFPVASTPD RG AA PALGETPQGGGCHSTAPL+VSGGG TSSLWP NQ Q  SSPLASPSPSSSLPCPPEGNGGLAAFPGNRKV+TTVR+AGGSGGGDRVPIPARPVG+GT+AGVASMLQASAQSM  ANPAPAQPPANAPT TRAA
Sbjct:    1 MGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILPNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQLKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALMTALMEKMRVVGFPVASTPDARGGAAAPALGETPQGGGCHSTAPLSVSGGGVTSSLWPPNQQQTSSSPLASPSPSSSLPCPPEGNGGLAAFPGNRKVTTTVRVAGGSGGGDRVPIPARPVGIGTHAGVASMLQASAQSMKFANPAPAQPPANAPTSTRAA 314          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: D8LDI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI9_ECTSI)

HSP 1 Score: 493 bits (1270), Expect = 6.600e-168
Identity = 269/315 (85.40%), Postives = 278/315 (88.25%), Query Frame = 0
Query:  126 MGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALKSALMEKMRVVGFPVASTPDTRGAAAT--PALGETPQGGGCHSTAPLNVSGGGGTSSLWPQNQHQKSSPLASPSPSSSLPCPPEGNGGLAAFPGNRKVSTTVRIAGGSGGGDRVPIPARPVGVGTYAGVASMLQASAQSMTVANPAPAQPPANAPTPTRAA 438
            MGLKKAEPSRLKDLLPKKDRSIEADVM SHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGV+MAAPDQIKEAFGVPRDLASAIDRL+GPQSMKRSVELMGQCVQVQRSAHGI+MNAMETQQALK+ALMEKMR+VGFPVAS PD RGAAA   P+LGETP+GGGCHSTAPLNVSGGGGTS LWPQNQ +KSSPLASP PSSSLPCPPEGNGGLAAFPGNRK                        G+GTYAGVASMLQASAQSM VANP P QPPANAPT TRAA
Sbjct:    1 MGLKKAEPSRLKDLLPKKDRSIEADVMSSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVHMAAPDQIKEAFGVPRDLASAIDRLDGPQSMKRSVELMGQCVQVQRSAHGIIMNAMETQQALKTALMEKMRLVGFPVASRPDARGAAAAAAPSLGETPEGGGCHSTAPLNVSGGGGTSGLWPQNQQRKSSPLASPWPSSSLPCPPEGNGGLAAFPGNRK------------------------GIGTYAGVASMLQASAQSMNVANPVPTQPPANAPTSTRAA 291          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A835Z3W7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.430e-28
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 0
Query:  103 SRPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADV-MRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALKSALMEKMRVVGFP 293
            +RPKKRF+WPEELHRDFIAAVFD+GLK A+P  +  LLP  +      + ++S +QK+R+FRYQM+    G + D   E    G    G LG   +    G  +L    + + DGV     D  ++   +P  +   I+ L+G Q ++R+VEL+ QCVQVQ S    L  AME Q+ L+  +M K+  +G P
Sbjct:   37 ARPKKRFIWPEELHRDFIAAVFDVGLKSADPRAIASLLPDAESQGGTAIRIKSTLQKMRNFRYQMRKASNGGSSDMPGE----GDHYAGALG---DFGGGGEDALAAATANSRDGVG----DGRRDVLAIPEGVQRLINWLDGGQ-LRRNVELVAQCVQVQASIQQALSRAMENQRRLQEVMMNKVSDMGMP 216          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.250e-11
Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 0
Query:  104 RPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQK--GILSNGELGMSLEH 198
            R  KRF WP++LHRDF+AA+FD+GLK + PS + + +PK ++ I ++ ++SH+QK R  R + K        +  +++ +   G LS GEL   L H
Sbjct:   81 RWSKRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQ-ITSERVKSHLQKYRIHRIKSKKEFMSSYDEGLKKIREGTLGTLSAGELASFLTH 176          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.350e-10
Identity = 56/211 (26.54%), Postives = 93/211 (44.08%), Query Frame = 0
Query:  103 SRPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLA---GDNLDTAEELAQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASAIDRLEGPQSMKRSVELMGQCVQVQRSAHGILMNAMETQQALKSALMEKMRVVGFPVASTPDTRGAAATPALG 310
            S+ KKRFVWP++LHRDF+AA+FD+GLK A P  + +++    + +  D ++SH+QK R  R + +       G N   A       + + GE G               G+S +G   ++   D +    G      + +D      + +  + L+  C+Q+Q     +L  A+  Q          ++ +GF   S      A A  ALG
Sbjct:   52 SKAKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSN-TKELTPDHIKSHLQKYRLHRERAREEFLQHFGKNPFVAGAAGTGLVCAKGEAG---------------GVSRDGSASSL---DSVNGIGG-----RAEMDHQGDEDAFRGQLNLIRDCIQMQAGFQSVLRQALMQQTQXXXXXXXXLQALGFDGPSARMAAAAGAREALG 238          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A7S2YNK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNK9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.230e-9
Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 0
Query:  104 RPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEEL---------AQKGILSNGELGMSLEHRRDGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASA 238
            R  KRF WPEELHRDF++A+FD+GLK + PS L + +PK ++ I  + ++SH+QK R  R + K         T ++L         +    L+ G +   L +    +     G S              +E   VP+++AS+
Sbjct:  190 RWSKRFTWPEELHRDFVSAIFDVGLKHSSPSTLLEQMPKHEQ-ITTERIKSHLQKYRLHRVKSKQEFMHTYTATLQQLQAGTVGKDGSNNKTLNGGSVAGQLTYAAMTNKDTKGGASAESATATTKPASATEEGAQVPQEVASS 332          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A7S1Z020_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z020_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.080e-8
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 0
Query:  103 SRPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKG----------ILSNGELGMSLEH 198
            +R  KRF WP+ELHRDF++A+FD+GLK + PS + + + K D SI ++ ++SH+QK R  R + K            +L   G           LS+GE+   L H
Sbjct:  322 NRWSKRFTWPDELHRDFVSAIFDVGLKHSSPSAILENMRKHD-SITSERVKSHLQKYRLRRAKSKREFMASYDSAMSKLNSSGGGGNEAEPSSSLSSGEVAAHLSH 426          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: B7G3R5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3R5_PHATC)

HSP 1 Score: 68.2 bits (165), Expect = 1.340e-8
Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:  104 RPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGI-----LSNGELGMSLEH 198
            R  KRF WPE+LHRDF++A+FD+GLK++ PS + + +PK    + ++ ++SH+QK R  R + K         T  +L + G      L++ E+   L H
Sbjct:  217 RWSKRFTWPEDLHRDFVSAIFDVGLKQSSPSTILETMPK-HADVTSERIKSHLQKYRLHRIKSKQDFMTAYDATVRKLQKNGTGALKSLADAEVAAHLMH 315          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A7S2KY53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KY53_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.160e-8
Identity = 30/66 (45.45%), Postives = 47/66 (71.21%), Query Frame = 0
Query:  103 SRPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLL-PKKDRSIEADVMRSHIQKLRSFRYQMK 167
            SR  KRF WP+E HRDF++AVFD+GLK++ P+ L + +   K+ +I ++ ++SH+QK R  R + K
Sbjct:   45 SRWSKRFAWPDEAHRDFVSAVFDVGLKQSSPAALLEQMGSNKNEAITSERVKSHLQKYRIHRAKSK 110          
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Match: A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.240e-8
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0
Query:  104 RPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEADVMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSN 189
            R  +RF WP+ELHRDF++AVFD+GLK + PS L + +PK +  I ++ ++SH+QK R  R + K         T  ++ +  I SN
Sbjct:  155 RWSRRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHE-DITSERIKSHLQKYRLHRQKSKKEFMSSYDRTLMKMKRGEIESN 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6228.16954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5A6_9PHAE1.170e-19093.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDI9_ECTSI6.600e-16885.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3W7_9STRA1.430e-2840.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3LD31_9STRA8.250e-1139.18Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
W7U4E9_9STRA6.350e-1026.54Two-component response regulator arr12 n=2 Tax=Mon... [more]
A0A7S2YNK9_9STRA1.230e-930.56Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1Z020_9STRA1.080e-836.79Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B7G3R5_PHATC1.340e-836.00Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KY53_9STRA2.160e-845.45Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3QDX4_9STRA2.240e-840.70Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 106..162
e-value: 8.1E-9
score: 33.7
NoneNo IPR availableGENE3D1.10.10.60coord: 103..165
e-value: 6.7E-10
score: 40.8
NoneNo IPR availablePANTHERPTHR31312FAMILY NOT NAMEDcoord: 76..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6228contigEcto-sp13_S_contig6228:2250..8434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6228.16954.1mRNA_Ecto-sp13_S_contig6228.16954.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6228 2250..8434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6228.16954.1 ID=prot_Ecto-sp13_S_contig6228.16954.1|Name=mRNA_Ecto-sp13_S_contig6228.16954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=438bp
ALRFSALLWRFGRKPSCTIGLTYVLPPQEGTGGGAFATTTTTIAVGVSAL
TANCGSCSTIFGARSKKRGRGAWGATSAATDSGDSDSGGGSGDEREERSS
SSSRPKKRFVWPEELHRDFIAAVFDMGLKKAEPSRLKDLLPKKDRSIEAD
VMRSHIQKLRSFRYQMKNTLAGDNLDTAEELAQKGILSNGELGMSLEHRR
DGSMSLTRGLSENGDGVNMAAPDQIKEAFGVPRDLASAIDRLEGPQSMKR
SVELMGQCVQVQRSAHGILMNAMETQQALKSALMEKMRVVGFPVASTPDT
RGAAATPALGETPQGGGCHSTAPLNVSGGGGTSSLWPQNQHQKSSPLASP
SPSSSLPCPPEGNGGLAAFPGNRKVSTTVRIAGGSGGGDRVPIPARPVGV
GTYAGVASMLQASAQSMTVANPAPAQPPANAPTPTRAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants