prot_Ecto-sp13_S_contig61765.16876.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61765.16876.1
Unique Nameprot_Ecto-sp13_S_contig61765.16876.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.100e-26
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEV 57
            MMFEVLETSWGTLQ SLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEV
Sbjct:  723 MMFEVLETSWGTLQKSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEV 779          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A7S2MB43_9STRA (Spindle pole body component n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MB43_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 8.230e-9
Identity = 27/57 (47.37%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEV 57
            MMFEVLE SW TLQ  L++A  LD++I AH  Y++ I+ +A+L+E++ +V +K+  V
Sbjct:  491 MMFEVLEESWTTLQKQLNAAENLDEVIGAHNEYLEAIIQKALLDEDTKEVLDKLHSV 547          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: UPI000C781862 (gamma-tubulin complex component 3 homolog n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C781862)

HSP 1 Score: 54.3 bits (129), Expect = 4.810e-7
Identity = 21/52 (40.38%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    3 FEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKV 54
            FEV+E  W TL   +D+A TL+D+IQAH+ ++  I++RA+L+  + +++N++
Sbjct:  444 FEVMECGWDTLVKQIDTAETLEDVIQAHEEFLSTIISRALLDHRTIEIRNQL 495          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A5B7JT24_PORTR (Gamma-tubulin complex component n=2 Tax=Heterotremata TaxID=116706 RepID=A0A5B7JT24_PORTR)

HSP 1 Score: 52.0 bits (123), Expect = 1.230e-6
Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVK 51
            M FEVLE +W  L N L +A +LDD+I AH  ++K I+A A+L+ ES +V+
Sbjct:   66 MTFEVLECAWHDLMNLLKTAQSLDDVIAAHNHFLKRIVAGALLDAESKEVR 116          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A0N7ZBX6_SCYOL (Gamma-tubulin complex component n=2 Tax=Portunidae TaxID=6757 RepID=A0A0N7ZBX6_SCYOL)

HSP 1 Score: 52.0 bits (123), Expect = 3.170e-6
Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVK 51
            M FEVLE +W  L N L +A +LDD+I AH  ++K I+A A+L+ ES +V+
Sbjct:  710 MTFEVLECAWHDLMNLLKTAQSLDDVIAAHNHFLKRIVAGALLDAESKEVR 760          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A7S3H0B4_9STRA (Spindle pole body component n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0B4_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 5.280e-6
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAML 43
            +MFEVLETSW  LQ ++  A  +DD+I AH AY+  +L RA+L
Sbjct:   13 LMFEVLETSWVKLQETIGRARCVDDVITAHDAYLSEVLDRALL 55          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: S8E723_9LAMI (Gamma-tubulin complex component n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E723_9LAMI)

HSP 1 Score: 51.2 bits (121), Expect = 5.930e-6
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVK 51
            +MFEVLE SW     +L+ A  LDD++ AH+ Y+K I+ +++L E+S  +K
Sbjct:  715 IMFEVLEVSWSNFSKALEVARDLDDLLAAHEKYLKSIVEKSLLAEQSHSLK 765          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A6G1IY73_9PLEO (Spindle pole body component n=1 Tax=Lentithecium fluviatile CBS 122367 TaxID=1168545 RepID=A0A6G1IY73_9PLEO)

HSP 1 Score: 51.2 bits (121), Expect = 5.940e-6
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSA-LTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEV 57
            ++FEV+E+SW  LQ SL     TLDD+IQAH  Y+  I  + +L  +STD   ++ E+
Sbjct:  693 ILFEVIESSWNELQESLHKPESTLDDMIQAHAKYLNSITRKGLLGSQSTDFTGQLHEL 750          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A187GC50_PENVA (Gamma-tubulin complex component n=7 Tax=Penaeus TaxID=133894 RepID=A0A187GC50_PENVA)

HSP 1 Score: 50.8 bits (120), Expect = 8.120e-6
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVK 51
            M FEVLE SW  L  +L SA +LDD+I AH  ++K I+A A+L+ +S  V+
Sbjct:  721 MTFEVLECSWHGLMTNLRSAQSLDDVIAAHNEFLKRIVAGALLDSKSKQVR 771          
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Match: A0A0R3WLP9_HYDTA (Gamma-tubulin complex component n=2 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WLP9_HYDTA)

HSP 1 Score: 49.7 bits (117), Expect = 2.070e-5
Identity = 20/49 (40.82%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    3 FEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVK 51
            FE LE +W  L   L+SA  LD++I+AHKA++  +++R +L++ S D++
Sbjct:  551 FEALECAWVALGTKLNSANDLDEVIEAHKAFLSNVISRCLLDQNSRDLR 599          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61765.16876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G6W1_ECTSI1.100e-2698.25Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A7S2MB43_9STRA8.230e-947.37Spindle pole body component n=2 Tax=Dictyocha spec... [more]
UPI000C7818624.810e-740.38gamma-tubulin complex component 3 homolog n=1 Tax=... [more]
A0A5B7JT24_PORTR1.230e-649.02Gamma-tubulin complex component n=2 Tax=Heterotrem... [more]
A0A0N7ZBX6_SCYOL3.170e-649.02Gamma-tubulin complex component n=2 Tax=Portunidae... [more]
A0A7S3H0B4_9STRA5.280e-653.49Spindle pole body component n=1 Tax=Spumella elong... [more]
S8E723_9LAMI5.930e-643.14Gamma-tubulin complex component n=1 Tax=Genlisea a... [more]
A0A6G1IY73_9PLEO5.940e-643.10Spindle pole body component n=1 Tax=Lentithecium f... [more]
A0A187GC50_PENVA8.120e-649.02Gamma-tubulin complex component n=7 Tax=Penaeus Ta... [more]
A0A0R3WLP9_HYDTA2.070e-540.82Gamma-tubulin complex component n=2 Tax=Hydatigena... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042241Gamma-tubulin complex, C-terminal domain superfamilyGENE3D1.20.120.1900coord: 1..58
e-value: 3.1E-11
score: 45.0
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 1..56
e-value: 4.0E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61765contigEcto-sp13_S_contig61765:427..603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61765.16876.1mRNA_Ecto-sp13_S_contig61765.16876.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61765 427..609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61765.16876.1 ID=prot_Ecto-sp13_S_contig61765.16876.1|Name=mRNA_Ecto-sp13_S_contig61765.16876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MMFEVLETSWGTLQNSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDV
KNKVEEVST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042241GCP_C_sf
IPR040457GCP_C