prot_Ecto-sp13_S_contig6162.16859.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6162.16859.1
Unique Nameprot_Ecto-sp13_S_contig6162.16859.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length262
Homology
BLAST of mRNA_Ecto-sp13_S_contig6162.16859.1 vs. uniprot
Match: A0A6H5JDY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY6_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 6.190e-122
Identity = 176/208 (84.62%), Postives = 185/208 (88.94%), Query Frame = 0
Query:    1 MEERKRRAAGANLQIAGCQIPGFQSPGCPSDEDELLYADEEDAGPDTLANAIFSRLFCVAFDRCVYPPAWIYEDELDSMLGAQPPLSDHNPPGESRARSTSGDNDSGEAAAEDTKPLYDVILEDDNDDNTKTVAMRPGNPWRALMVAPPPSPLAQSPRRRWSDDHAARVASTALMGDLDEWPLTAQAPPSDPHRRRSEPENRRSAVVI 208
            M ER+RR AGANLQIAGCQIPGFQSP CP DEDELL+ADEEDAGPDT ANAIFSRLFCVAFDRCV+PPAWIYEDELDS  GA PPLSDHNPPGES  RSTS D + GEAAAEDTKPLYDVILEDDNDDNTKT+AMRPGNPWR  MVAPPPSPLAQSPRR+ SDDHAAR AS+ALMGDLDEWPLT QAPPSDPHRRR EP +R  AV +
Sbjct:    1 MVERERRTAGANLQIAGCQIPGFQSPCCPCDEDELLHADEEDAGPDTRANAIFSRLFCVAFDRCVFPPAWIYEDELDSKPGAPPPLSDHNPPGESHTRSTSDDKNGGEAAAEDTKPLYDVILEDDNDDNTKTMAMRPGNPWRP-MVAPPPSPLAQSPRRQRSDDHAARDASSALMGDLDEWPLTVQAPPSDPHRRRPEPHDRLLAVAM 207          
BLAST of mRNA_Ecto-sp13_S_contig6162.16859.1 vs. uniprot
Match: D8LCL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL0_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.510e-56
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0
Query:    1 MEERKRRAAGANLQIAGCQIPGFQSPGCPSDEDELLYADEEDAGPDTLANAIFSRLFCVAFDRCVYPPAWIYEDELDSMLGAQPPLSDHNPP 92
            M ER+RRAAGANLQIAGCQIPGFQSPGCPSDEDELLYADEEDAGPDTLANAIFSRLFCVAFDRCVYPPAWIYEDELDS  GA PPLSDHNPP
Sbjct:    1 MVERQRRAAGANLQIAGCQIPGFQSPGCPSDEDELLYADEEDAGPDTLANAIFSRLFCVAFDRCVYPPAWIYEDELDSTPGALPPLSDHNPP 92          
BLAST of mRNA_Ecto-sp13_S_contig6162.16859.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 5.080e-19
Identity = 86/234 (36.75%), Postives = 105/234 (44.87%), Query Frame = 0
Query:   36 LYADEEDAGPDTLANAIFSRLFCVAFDR-CVYPPAWIYEDELDSMLGAQPPLSDHNPPGESRARSTSGDNDSGEAAAEDTKPLYDVILEDDNDDNTKTVAMRPGNPWRALMVAPPPS-----------PLAQSPRRRWSDDHAARVASTALMGDLDEWPLTAQAPPSDPHRRRSEPENRRSAVVICSSRSDXXXXXXXXXXXXXXXXXXEDPKIMRGAPWQGDDYLPGDMAGGV 257
            + A + DA  DT  NA+  RL    F+R  V P A I+    D+   A   + D        A    G +DS   A E  K  +DV L D   D+TK  A R GN    L V PP             P + SP RR SD    RVAST LMGDL   PLT QAPP++ HR+R E    +  VV      D                  EDP +MR  PW+ DD+L GD+ GGV
Sbjct:    1 MLAGQVDADADTAGNAVKRRLVFGDFNRKIVDPSARIHVGGPDATAAAAVLVRDLELSDAGPAPKKLGTSDSELRAVEGAKSWWDVDLGDGGGDSTKKGA-RGGN-LSPLTVTPPXXXXXXXXXXLSLPPSLSPVRRMSDAGVVRVASTTLMGDLKLSPLTVQAPPNNRHRQRCELYAAKRPVVEVH---DSSIVSPAGSSSSSNKIGGEDPNVMRQPPWREDDWLAGDLLGGV 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6162.16859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDY6_9PHAE6.190e-12284.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCL0_ECTSI1.510e-5694.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ42_9PHAE5.080e-1936.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6162contigEcto-sp13_S_contig6162:6385..7652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6162.16859.1mRNA_Ecto-sp13_S_contig6162.16859.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6162 6307..7877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6162.16859.1 ID=prot_Ecto-sp13_S_contig6162.16859.1|Name=mRNA_Ecto-sp13_S_contig6162.16859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
MEERKRRAAGANLQIAGCQIPGFQSPGCPSDEDELLYADEEDAGPDTLAN
AIFSRLFCVAFDRCVYPPAWIYEDELDSMLGAQPPLSDHNPPGESRARST
SGDNDSGEAAAEDTKPLYDVILEDDNDDNTKTVAMRPGNPWRALMVAPPP
SPLAQSPRRRWSDDHAARVASTALMGDLDEWPLTAQAPPSDPHRRRSEPE
NRRSAVVICSSRSDRGSRSSRSSSSSSNGSNGEDPKIMRGAPWQGDDYLP
GDMAGGVGGTD*
back to top