prot_Ecto-sp13_S_contig6156.16852.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6156.16852.1
Unique Nameprot_Ecto-sp13_S_contig6156.16852.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6156.16852.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE)

HSP 1 Score: 470 bits (1210), Expect = 6.570e-165
Identity = 230/241 (95.44%), Postives = 231/241 (95.85%), Query Frame = 0 
Query:    1 MMVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMKNGAVSLMKDQQGGASADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNTENTPRWVKPEGGWDGRRSDESQARWWEKQKRLSFVVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRVL 241
            M+VRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLE GMKNGAVSLMKDQQGG SADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGR ALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRN E    WVKPEGGWDGR SDESQARWWEKQKRLS VVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRVL
Sbjct:  164 MLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETGMKNGAVSLMKDQQGGTSADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRVALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPEKKSHWVKPEGGWDGRGSDESQARWWEKQKRLSLVVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRVL 404
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BLAST of mRNA_Ecto-sp13_S_contig6156.16852.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 8.760e-158
Identity = 229/241 (95.02%), Postives = 234/241 (97.10%), Query Frame = 0 
Query:    1 MMVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMKNGAVSLMKDQQGGASADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNTENTPRWVKPEGGWDGRRSDESQARWWEKQKRLSFVVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRVL 241
            M+VRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGM+NGAVSLMKDQQGG SADQAVDFHGWSTRSA CIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRN E+TPRWVKPEGGWDG  SDESQARWWEKQKRLS VVG+PRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWL RNPR+L
Sbjct:  713 MLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMRNGAVSLMKDQQGGTSADQAVDFHGWSTRSAGCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPESTPRWVKPEGGWDGCGSDESQARWWEKQKRLSLVVGRPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLGRNPRIL 953
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6156.16852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L791_9PHAE6.570e-16595.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA3_ECTSI8.760e-15895.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6156contigEcto-sp13_S_contig6156:5524..7726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6156.16852.1mRNA_Ecto-sp13_S_contig6156.16852.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6156 5165..7761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6156.16852.1 ID=prot_Ecto-sp13_S_contig6156.16852.1|Name=mRNA_Ecto-sp13_S_contig6156.16852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MMVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMKNGAVSLMKDQQ
GGASADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRAAL
AQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNT
ENTPRWVKPEGGWDGRRSDESQARWWEKQKRLSFVVGKPRPPPCIRNAVE
EFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRVL*
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