mRNA_Ecto-sp13_S_contig61.16768.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A6H5L4S8_9PHAE (SpoU_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S8_9PHAE) HSP 1 Score: 634 bits (1635), Expect = 7.300e-224 Identity = 342/357 (95.80%), Postives = 345/357 (96.64%), Query Frame = 2
Query: 176 MSVAFNSGPSAAPLARMIAAFVASRAGRPPSAGSRDGGGGGIRDRGIRAAAMSSIPNGLWRDRGGTLDITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQRLVAERHVGVRGGRGATGDGELSGAVSQ 1246
MSVAFNSGPSAAPLARMIAAFVASRAGRPPSA SRDG GG IRDRGIRAAAMSS+P GLWRDRGGTLDITSA+NPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI ALRASPGPRLQAALETLSAD+VAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPL GGVESLNAAVAGAIVLGEAQRQRLVAERHVGVR G G TGDGELSGAVSQ
Sbjct: 1 MSVAFNSGPSAAPLARMIAAFVASRAGRPPSASSRDGRGG-IRDRGIRAAAMSSLPYGLWRDRGGTLDITSARNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI----ALRASPGPRLQAALETLSADVVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLEGGVESLNAAVAGAIVLGEAQRQRLVAERHVGVRWGGGMTGDGELSGAVSQ 352
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A835Z4A7_9STRA (tRNA/rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A7_9STRA) HSP 1 Score: 313 bits (803), Expect = 3.150e-99 Identity = 161/274 (58.76%), Postives = 209/274 (76.28%), Query Frame = 2
Query: 350 LWRDRGG--TLDITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
LWR G LDITS NP++K + HKR++RD G++L EG RLV D ++ GL+P LV+VSPEAL + G L A L+ LS+D+V +A + V R CDTV+ QGVVA+V RP+LPLP T++ L+ DG+ DPGN+GT+VRTAA LG DAVV+TG+CVD W+PK +RASMGA+FR+PS+ +W+E EL++ARG+ +YAADGGA +H++ W+ PSALVVG+EA GLS AAR +L+ G I G+ +PL GVESLNAAVAGAIVLGEAQRQR
Sbjct: 9 LWRPPGSGDLLDITSPTNPRIKTL---HKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A8J5X903_DIALT (SpoU_sub_bind domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X903_DIALT) HSP 1 Score: 210 bits (535), Expect = 1.260e-59 Identity = 116/265 (43.77%), Postives = 163/265 (61.51%), Query Frame = 2
Query: 380 ITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLP--LPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDA-DWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
ITS +NP VK +R RR R+ G +L EG RLV D ++ G V+V+ L PG LQ L L A +V++A + C TV+ QG+VA V P LP VL+ D + DPGN+GTLVR AAG G DAVV G+C D W+PK +R++MG +FRLP + + W ++ ++ G+R+ AADGG S + A DW +P A+V+G+EA GLS+A R +L +G + V +P+ G++SLNAA+AG ++L E RQR
Sbjct: 15 ITSGKNPVVKALRRLESRRHRERDGLLLLEGLRLVTDALDAGFCAETVLVAEALLAQQPG--LQRVLAALPAGVVSLADEAALAAACTTVSPQGIVAAVRMPERTGALPDAASLVLVLDNLSDPGNVGTLVRGAAGFGCDAVVALGACADAWSPKALRSAMGGTFRLPIVPAQEWAQLRAQLQRAGLRVLAADGGVAASDYAAVDWRAPLAVVIGSEATGLSEAVRADLAAGSVCAVGIPMAAGLDSLNAAMAGTVLLSECARQR 277
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: R1BHS4_EMIHU (RNA methyltransferase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BHS4_EMIHU) HSP 1 Score: 207 bits (528), Expect = 6.130e-59 Identity = 117/263 (44.49%), Postives = 155/263 (58.94%), Query Frame = 2
Query: 380 ITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQRL 1168
+ S NP++KL + H RR R+ G IL EG RL+ D ++ GL+ V+VS E LR RL L + A+I A A + + DT T GV+AL ++P+L LPP+ VL+CD I DPGNLGTL+R +A G D +L C D W PK +RA MGA FR+P ++++SW + G + AAD G +H+D DW SALVVG+EA G+S + P G +ESLNAAVAGAIVL EAQRQR+
Sbjct: 6 LNSPNNPRLKLAKRLHARRQREKTGLILLEGQRLIADALDAGLSADFVLVSDEQLRDGALDRL---LARVPAEIAASTTAPLFRDVSDTTTPAGVLALFQKPILTLPPSPSLVLVCDSISDPGNLGTLLRASAAAGVDGCLLMAGCADPWGPKALRAGMGAQFRVPMMQVDSWAGAAASLVEWGCAIRAADAGGTSAHYDCDWRDASALVVGSEAHGISREVLAD-----------PRAGDLESLNAAVAGAIVLHEAQRQRM 254
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: R7QT73_CHOCR (SpoU_sub_bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT73_CHOCR) HSP 1 Score: 201 bits (511), Expect = 5.580e-56 Identity = 126/281 (44.84%), Postives = 170/281 (60.50%), Query Frame = 2
Query: 341 PNGLWRDRGGTLDITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADI--VAVAP---AEVVQRC-CDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
P R +L++TSA+NP +KL RS +RR RD IL EG RL+ D + P + S + LR S AA+ L AD+ AP AE + R C+TV+ QGVVA++ERP LPLP + L+CD ++DPGN+GTL+R+AAG G DAV++T C D W K +RA MGA FRLP +SW EV++++ G + ADGG + DW P+A+VVG EA G + A E + G + G+ PL G+ESLNAAVAG++VL E +RQR
Sbjct: 22 PTRALRTSRASLELTSARNPHLKLARSLLRRRHRDKNNLILLEGQRLIEDALSASFAPHQLFYSDKLLRRS------AAMGALLADVRRSGCAPMLVAEPIMRSLCNTVSPQGVVAVLERPALPLPDSGTLALVCDEVRDPGNVGTLLRSAAGAGVDAVLMTHGCADPWGLKVLRAGMGAHFRLPVQVDQSWDEVMQVVHKWGCEVSVADGGGE-DYAKVDWCGPAAIVVGGEANGPGERAFQEAQ-GRVVGI--PLCSGMESLNAAVAGSVVLFEVRRQR 292
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A7S2B686_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B686_9EUKA) HSP 1 Score: 198 bits (504), Expect = 1.140e-55 Identity = 116/241 (48.13%), Postives = 148/241 (61.41%), Query Frame = 2
Query: 467 EGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGV------ESLNAAVAGAIVLGEAQRQRLV 1171
EGHRLV D + GL P V++ AL +S G RL AL L D V PA +V++ DT T QGV+A++ LPLPP VL+CDGI DPGNLGTL+R+AAG G DAV+L C D W KT+R+ MGA FR+P + +W + +L+ AAD G L+H + DW +AL+VG+EA GLSDA R + + VPL G+ ESLNAAVAG++VL EAQRQR V
Sbjct: 1 EGHRLVLDALASGLQPEFVVIHDAALASSIGERLGTALAQLETDRVVRTPAHIVEQLSDTQTPQGVIAVLAHEPLPLPPAPTLVLVCDGISDPGNLGTLLRSAAGSGVDAVLLLPGCSDPWGLKTLRSGMGAQFRVPLQHMGTWADTSDLLADWSCTALAADAGGELAHDEVDWRRGAALIVGSEAHGLSDAVRADPS---VQLCRVPLAEGLGASECLESLNAAVAGSVVLFEAQRQRRV 238
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A7S0LQQ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ5_9EUKA) HSP 1 Score: 200 bits (508), Expect = 1.430e-55 Identity = 109/263 (41.44%), Postives = 161/263 (61.22%), Query Frame = 2
Query: 380 ITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAAL-ETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
++S NP++KL+R +R RD G ++ EGHRL+ D ++ G + V++S EAL A G RL +L E L A+ +A+AP ++ DT T QGVV ++++P L LP + VL+ D I DPGNLGTL+R+AAG G ++ +L C D W K +RA MGA RLP + + + E ++R G AAD ++ DW PSALVVG+EA GL++ ++++ +PL GVESLNAA+AG++++ E RQR
Sbjct: 33 LSSTSNPRIKLLRKLQAKRARDKSGLMILEGHRLLTDALDAGYSADFVLLSEEALHAPEGARLARSLREVLRAEQLAIAPQSLIAELSDTQTPQGVVGMLQQPRLALPESPSFVLVLDRISDPGNLGTLLRSAAGAGVESALLLSGCTDPWGLKALRAGMGAQLRLPLVEVRGYAEAAGMLRRWGCHGVAADARGETDYWAVDWRQPSALVVGSEAHGLAEEVLSDVDT---QLCRIPLANGVESLNAAIAGSVMMYEVGRQR 292
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A1X6PKW2_PORUM (SpoU_sub_bind domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW2_PORUM) HSP 1 Score: 198 bits (504), Expect = 3.050e-54 Identity = 124/281 (44.13%), Postives = 169/281 (60.14%), Query Frame = 2
Query: 332 SSIPNGLWRDRGGTLDITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASPGPRLQAALET---LSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
S +P+ L +++ S +NP++K +R +RR R+ G +L EGHRLV D + G P + + A R + RL AL T ++ D + VA +VV CDTVT QGVVA+V RP + P +L DG+ DPGN+GTL+R+AA GAD VVLT C D W+PK +RA MGA RLP L +EVV R RG+R+ ADG A +++ DW +P+ LVVG EA G S A + V++P+ G VESLNAA+AG++VL EA+RQR
Sbjct: 80 SPLPDALQ----DAVEVVSTRNPRIKAVRHLLRRRMREREGLLLLEGHRLVVDAL-GAARPAAPVHTVVATRQAAA-RLWPALSTATGVARDALLVATPDVVASVCDTVTPQGVVAVVGRPSTTVVPGSTLLLALDGVADPGNVGTLLRSAAAAGADGVVLTKGCADVWSPKALRAGMGAQLRLPVLAGLEPEEVVAWARGRGLRLRVADGSAVMAYDGVDWAAPTVLVVGGEAEGPSAALLAAADDV----VAIPMLGEVESLNAAIAGSVVLYEARRQR 350
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A0P6YEI2_9CHLR (SpoU_sub_bind domain-containing protein n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0P6YEI2_9CHLR) HSP 1 Score: 195 bits (495), Expect = 3.200e-54 Identity = 116/265 (43.77%), Postives = 158/265 (59.62%), Query Frame = 2
Query: 380 ITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLT-PTLVIVSPEALRASPGPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQRLV 1171
ITS NP+VK R+ H+RR R+ GKIL EG RLV D + G+ L S +A R A L + EV+Q DTVT QG+VA+ ERP L P + +LI D ++DPGNLGTL+R AAG G + V+L VD W+PK +RA MGA FRLP +W+E+ + + G+ +Y AD + +FD DWT+P+ L+VG E G+ +AAR + V++PL VESLNAA+AG ++L EA+RQRL+
Sbjct: 4 ITSLANPRVKAARALHRRRMREREGKILLEGARLVHDAFQAGVAFEALFYTSDQAAHIPEALRSCAWLVS----------EEVMQALSDTVTPQGIVAVAERPQLAWPTSATLLLIADNVRDPGNLGTLLRAAAGAGVEGVLLPKGTVDVWSPKVLRAGMGAHFRLPVRAGLTWEEIAQAVN--GLTVYVADARGAVRYFDVDWTAPTVLIVGGETEGIGEAARALAHTA----VAIPLAREVESLNAAMAGTVILFEARRQRLM 252
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Match: A0A540V9T9_9CHLR (RNA methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9T9_9CHLR) HSP 1 Score: 190 bits (483), Expect = 2.120e-52 Identity = 116/263 (44.11%), Postives = 158/263 (60.08%), Query Frame = 2
Query: 380 ITSAQNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVIVSPEALRASP-GPRLQAALETLSADIVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLGGGVESLNAAVAGAIVLGEAQRQR 1165
ITS NP++K +R H+RR R + G+IL EG RLV D + G+ P +V+ PEA+ RL L+ + +A +P EV DTVT QG++A+V P PLP VLI D ++DPGN GTL+RTA G D V+L VD + K +RA MGA FRLP ESW+++ + + I +Y A+ A+ + DW P+ALV+G EA G SDAAR + +++P+ G VESLNAAVAGA++L EA RQR
Sbjct: 2 ITSTSNPRIKEIRKLHRRRHRHESGRILLEGVRLVEDATQAGVRPEMVLYVPEAVAGQERAARLLQQLQEQGVECLACSP-EVFASVSDTVTPQGILAVVPLPHRPLPSQPTLVLILDQVRDPGNAGTLLRTAEAAGVDLVLLAPGTVDPFNEKVIRAGMGAHFRLPLRICESWEQLAQQLPPEMI-LYRAEAEAQTPYDQVDWRRPAALVIGGEAAGPSDAARQRTHA-----IAIPMQGQVESLNAAVAGAVILFEAARQR 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61.16768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig61.16768.1 >prot_Ecto-sp13_S_contig61.16768.1 ID=prot_Ecto-sp13_S_contig61.16768.1|Name=mRNA_Ecto-sp13_S_contig61.16768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp MSVAFNSGPSAAPLARMIAAFVASRAGRPPSAGSRDGGGGGIRDRGIRAAback to top mRNA from alignment at Ecto-sp13_S_contig61:21528..25674+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig61.16768.1 ID=mRNA_Ecto-sp13_S_contig61.16768.1|Name=mRNA_Ecto-sp13_S_contig61.16768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61:21528..25674+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig61:21528..25674+ >mRNA_Ecto-sp13_S_contig61.16768.1 ID=mRNA_Ecto-sp13_S_contig61.16768.1|Name=mRNA_Ecto-sp13_S_contig61.16768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61:21528..25674+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |