mRNA_Ecto-sp13_S_contig6089.16746.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6089.16746.1
Unique NamemRNA_Ecto-sp13_S_contig6089.16746.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: D8LQV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV3_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 1.660e-165
Identity = 257/260 (98.85%), Postives = 257/260 (98.85%), Query Frame = 1 
Query:    1 MSSVTIGDVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDDR 780
            MSSVTIGDVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLH NCPP EQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAG DDR
Sbjct:    1 MSSVTIGDVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHGNCPPLEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGPDDR 260
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A835ZPD2_9STRA (IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPD2_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.560e-100
Identity = 161/254 (63.39%), Postives = 195/254 (76.77%), Query Frame = 1 
Query:   19 GDVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDDR 780
            G V+++E +L DG+SAE +F TPGSRG            IDFGVE+V L+TR+TRNI +AFPFAS+ MDTVTESKMAIAMAL+GCIG +H +C  ++QV LV++VK YENGFI+ PAVMSP   V+ LD LKAERNISGVPITEDG +GS+LVGL TKRD DLV++R   LS +MTP D LI+G +G SLE AQ ++K  KKGYLPIVD  GNL +LTTRTDLLK+RDFP+STKD  +  LR  AAV A  +DR
Sbjct:    9 GGVSVTEADLVDGYSAEEVFGTPGSRGFTFDDMIALPGQIDFGVEQVELNTRLTRNIKLAFPFASSPMDTVTESKMAIAMALEGCIGFIHCHCSVEQQVGLVKKVKSYENGFITEPAVMSPDALVSALDALKAERNISGVPITEDGKMGSRLVGLITKRDTDLVEDRTASLSTYMTPADSLIVGSKGISLEAAQNLLKECKKGYLPIVDDAGNLVSLTTRTDLLKSRDFPYSTKDAESNTLRCGAAVLACVEDR 262
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A835ZCF6_9STRA (IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF6_9STRA)

HSP 1 Score: 303 bits (775), Expect = 5.630e-97
Identity = 159/257 (61.87%), Postives = 195/257 (75.88%), Query Frame = 1 
Query:   13 TIGDVTLSEEELQDGFSAETIFATPG-SRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDDR 780
            T G VT++EE+L DG+SAE IF+    +RG            IDFGVE+V L+T++TRNI ++FPFAS+ MDTVTESKMAIAMALQGCIG +H NC  + QV+ V++VK YENGFI+ PAVMSP   V+ LD LKAERNISGVPIT+DG +GSKLVGL TKRD DLV++R   LS +MTP + LI+G++G SLEEAQ ++K  KKGYLPIVD  GNL +LTTRTDLLK+RD+PHSTK+  T  LR  AAV A +  R
Sbjct:    7 THGGVTVTEEDLVDGYSAEMIFSAGAMNRGFTFDDMIALPGQIDFGVEQVDLNTKLTRNIKLSFPFASSPMDTVTESKMAIAMALQGCIGFIHCNCSAERQVEQVKKVKSYENGFITEPAVMSPDALVSALDALKAERNISGVPITQDGKMGSKLVGLITKRDTDLVEDRGASLSTYMTPAEGLIVGKKGISLEEAQTLLKECKKGYLPIVDDAGNLVSLTTRTDLLKSRDYPHSTKNAATNTLRCGAAVLAQEGHR 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A6V1RUF0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUF0_HETAK)

HSP 1 Score: 250 bits (639), Expect = 7.990e-77
Identity = 124/246 (50.41%), Postives = 173/246 (70.33%), Query Frame = 1 
Query:   22 DVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAV 759
            +VT+SEEEL+DG+ AE+IF+ PGS G            I FGV EV L++++++NI ++ PF S+ MDTVT +KMAI MAL G +G++H +CP +EQVK+V+ VK YENGFI  P  ++P  T+ DLD L+  + ISGVP+T DG +G++L+G+ TKRD D + +R +PL+  MTPV +L   +  C LE A  I+K SKKG+LP++D +G L ALTTR DL+K  +FP +TKD  T  L+V AAV
Sbjct:    6 NVTISEEELEDGYPAESIFSNPGSMGITFDDLIVLPGEITFGVHEVDLNSKVSKNISVSSPFVSSPMDTVTGTKMAIGMALNGGLGIVHYSCPLEEQVKMVRDVKRYENGFILEPYCLAPDATIEDLDALRDTKGISGVPVTADGRVGARLLGMVTKRDTDFLTDRSQPLTAVMTPVAELTCAQHPCDLESANRILKESKKGHLPVIDQDGCLRALTTRMDLIKNNEFPLATKDAATKSLKVGAAV 251
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A7S2Y056_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y056_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.360e-76
Identity = 133/246 (54.07%), Postives = 165/246 (67.07%), Query Frame = 1 
Query:   31 LSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAG 768
            +S+EEL DGF+   IF+ PGS+G            I FGVEEV L +++TRN+ +  PF S+ MDTVT  KMAIAMALQG +GV+H NC  +EQ K+V++VK YENGFI     + P   +++LD+L   + I+GVPITEDG  GSKLVGL  K + D +++R   L E MTPV D+  G   CSLE AQ IIK  K  YLPIVD  GNL ALTTR DLLK RDFP+STK+P T  LR  AA+ AG
Sbjct:    9 ISDEELSDGFAISQIFSAPGSQGITFDDLIMLPGAITFGVEEVDLTSKVTRNVVVKSPFVSSPMDTVTGHKMAIAMALQGGVGVIHNNCTIEEQCKMVRKVKRYENGFILEAFCLGPDDELSNLDELNEAKKITGVPITEDGHFGSKLVGLVEKGNYDFLEDRSTKLGEVMTPVSDIETGSYPCSLEHAQNIIKEKKLKYLPIVDENGNLRALTTRRDLLKNRDFPNSTKNPETKTLRCGAAIPAG 254
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: G4YIT1_PHYSP (Inosine-5'-monophosphate dehydrogenase n=12 Tax=Phytophthora TaxID=4783 RepID=G4YIT1_PHYSP)

HSP 1 Score: 231 bits (590), Expect = 1.230e-69
Identity = 122/245 (49.80%), Postives = 168/245 (68.57%), Query Frame = 1 
Query:   37 EEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQ 771
            +E L DG SA+ +F    S G            I+FGV++V + TR+T+ I ++ P  S+ MDTVTE+ MAIA+ALQG +G LH N   ++Q ++V+ VK YENGFI  P V+SP+ +VADLD+LK    +SGVPITEDGS+  KLVGL T RD+D +++R  PLS  M P++ L++G+   SLEEA +++K +KKG LPIVDA GNL +L TR DLLK RD+P++ +DP T KL V A+V   +
Sbjct:    5 DESLFDGVSAKQLFHNKDSNGLTFDDVISLPGHINFGVQDVDVATRLTKKIKLSAPIVSSPMDTVTEANMAIAIALQGGLGFLHCNNSIEQQAEMVRAVKHYENGFIPEPKVLSPSNSVADLDELK----VSGVPITEDGSVKGKLVGLVTSRDVDFLEDRSVPLSSIMVPLEQLVVGKYPISLEEANKVLKEAKKGTLPIVDASGNLVSLMTRLDLLKHRDYPNAVRDPETQKLLVGASVSVNE 245
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A7S2RJY9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJY9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.280e-68
Identity = 119/240 (49.58%), Postives = 160/240 (66.67%), Query Frame = 1 
Query:   46 LQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGA 765
            ++DG+SA+ IFA+PGSRG            IDFGV++V+L++RITRNI +  PF S+ MDTVTE+ MA+ MALQG +G+LH +C  + QV +V+ VK +ENGFI+NP  M     + DLD L  +  ISGVPITEDG IGS+LVGL   +  D V++R +PLS  M     +   R  C+LEEA   +K SK  YL ++D EG L +L+TR DL+K RDFP+  +DP T  L V AA+G+
Sbjct:   50 VRDGYSAKEIFASPGSRGYTFDDLICLPGAIDFGVDDVSLESRITRNIRIHSPFCSSPMDTVTEADMAVGMALQGGVGILHCHCEIEAQVAMVEHVKRFENGFIANPFCMRSDQPIQDLDTLSRDHGISGVPITEDGKIGSRLVGLVEGKLADFVEDRSQPLSSIMLSPSQVTTARHPCTLEEAHAALKSSKSNYLCVLDDEGKLKSLSTRIDLVKNRDFPNQCQDPSTQSLVVGAAIGS 289
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A2N1RRD0_9SPIR (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-5 TaxID=2013837 RepID=A0A2N1RRD0_9SPIR)

HSP 1 Score: 226 bits (575), Expect = 1.900e-67
Identity = 122/246 (49.59%), Postives = 165/246 (67.07%), Query Frame = 1 
Query:   43 ELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDDR 780
            +++DGFSAE IF TP   G            IDF  ++V+L+T +TRNI +  P  S+ MDTVTE++MAIA+AL G IG++H N   Q+Q  LV RVK YENGFI+ P V+SP   ++D+D +KA  N SG+P+TEDG + S+LVG+ T RD+D   +R + LSE M  V DL+  REG +L EA  I++ SKKG LPI+D+EG L AL +R+DLLK R+FP STKD    +LRV AA+    + +
Sbjct:    2 QIKDGFSAEEIFTTP--TGYAYNDFIILPGYIDFAPDDVSLETNLTRNIKLKSPLVSSPMDTVTEAEMAIALALWGGIGIIHYNNTIQQQADLVSRVKRYENGFINKPLVLSPQHKISDVDMIKARYNFSGIPVTEDGKLNSRLVGMVTNRDIDFEKDRTKTLSEVM--VKDLLTAREGITLSEANNILRTSKKGKLPIIDSEGRLVALLSRSDLLKNREFPLSTKDEKK-QLRVGAAISTKDESK 242
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A2D4C423_PYTIN (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C423_PYTIN)

HSP 1 Score: 222 bits (565), Expect = 5.940e-66
Identity = 119/249 (47.79%), Postives = 164/249 (65.86%), Query Frame = 1 
Query:   31 LSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDD 777
            +S+ EL DG SA  +F    + G            IDFGVE V +  ++T+NI +  P  S+ MDTVTE++MAIAMALQG IG+LH     + Q  +V+ VK +ENGFI  P V+SPT T+ADLD LK    +SGVPITEDG    KLVGL T RD+D +++R  PLS  M P + +++G+  C+LE+A + IK +KKG LPIV++EG+L +L TRTDL K RD+P++ ++P T +L V AAV    ++
Sbjct:    1 MSDMELYDGASAHELFRCDEAHGLTFDDIIALPGHIDFGVEAVDISAQLTKNIKLTTPIVSSPMDTVTEAEMAIAMALQGGIGILHCLTSIEAQSDMVRAVKQFENGFIVAPRVLSPTHTIADLDQLK----VSGVPITEDGKPNGKLVGLVTSRDVDFIEDRSLPLSRVMVPREQVVVGQYPCTLEQANKTIKEAKKGTLPIVNSEGHLVSLVTRTDLAKNRDYPNALRNPETMRLLVGAAVAVDDEE 245
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Match: A0A3M1GS29_9BACT (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1GS29_9BACT)

HSP 1 Score: 224 bits (570), Expect = 6.940e-66
Identity = 124/243 (51.03%), Postives = 160/243 (65.84%), Query Frame = 1 
Query:   52 DGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCPPQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITEDGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQEIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVAAAVGAGQDDR 780
            DG  A   F+  G +G            IDF V+ V L TR++RNI +  P  S+ MDTVTES MAI +AL G IGV+H N   +EQV  ++RVK +ENGFI++P  ++P  T+AD+D +K     S +PITEDG +GS+LVGL T RD+DL  +R  PL E MT   DL+  R+G SLEEA EI++ SKKG LPIVD+EG L AL TRTDLLK R+FP +TK+  T +L+V AAV   + DR
Sbjct:   82 DGLDARRFFSEAG-QGLTYDDLILLPGHIDFPVDAVQLHTRVSRNITLRAPIVSSPMDTVTESTMAIRLALLGGIGVIHYNNTIEEQVAELRRVKRFENGFITDPVCLAPENTIADVDRIKERHGFSSIPITEDGRLGSRLVGLVTNRDIDLEPDRSRPLREVMTR--DLLWARKGVSLEEANEILRRSKKGKLPIVDSEGRLVALVTRTDLLKNREFPDATKEKHTKRLKVGAAVSTREHDR 321
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6089.16746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV3_ECTSI1.660e-16598.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPD2_9STRA2.560e-10063.39IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema ... [more]
A0A835ZCF6_9STRA5.630e-9761.87IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax... [more]
A0A6V1RUF0_HETAK7.990e-7750.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y056_9STRA4.360e-7654.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
G4YIT1_PHYSP1.230e-6949.80Inosine-5'-monophosphate dehydrogenase n=12 Tax=Ph... [more]
A0A7S2RJY9_9STRA1.280e-6849.58Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2N1RRD0_9SPIR1.900e-6749.59Inosine-5'-monophosphate dehydrogenase n=1 Tax=Spi... [more]
A0A2D4C423_PYTIN5.940e-6647.79Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pyt... [more]
A0A3M1GS29_9BACT6.940e-6651.03Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pla... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6089contigEcto-sp13_S_contig6089:4108..8329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score481.9
Seed ortholog evalue1.9e-133
Seed eggNOG ortholog2880.D8LQV3
Preferred nameIMPDH2
Model size780
KEGG rclassRC00143,RC02207
KEGG koko:K00088
KEGG ReactionR01130,R08240
KEGG Pathwayko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110
KEGG ModuleM00050
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000323,GO:0000785,GO:0000902,GO:0000904,GO:0001654,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007623,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009409,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0009991,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022008,GO:0022607,GO:0030030,GO:0030141,GO:0030154,GO:0030182,GO:0030447,GO:0031175,GO:0031347,GO:0031349,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0032943,GO:0032989,GO:0032990,GO:0033554,GO:0034097,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0035578,GO:0035690,GO:0035821,GO:0036094,GO:0036170,GO:0036180,GO:0036230,GO:0040007,GO:0040011,GO:0042119,GO:0042221,GO:0042278,GO:0042330,GO:0042451,GO:0042455,GO:0042493,GO:0042582,GO:0042594,GO:0043010,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043473,GO:0043933,GO:0044003,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044416,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0046903,GO:0048066,GO:0048468,GO:0048511,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055086,GO:0055114,GO:0060041,GO:0060205,GO:0061564,GO:0065003,GO:0065007,GO:0070013,GO:0070661,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0075136,GO:0080134,GO:0090407,GO:0097159,GO:0097485,GO:0097708,GO:0099503,GO:0101002,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813
Exons6
EggNOG free text desc.IMP dehydrogenase activity
EggNOG OGsCOG0516@1,KOG2550@2759
Ec32 ortholog descriptionInosine-5'-monophosphate dehydrogenase
Ec32 orthologEc-24_002410.1
EC1.1.1.205
Cds size780
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6089.16746.1prot_Ecto-sp13_S_contig6089.16746.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6089 4108..8329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463848.1240554-CDS-Ecto-sp13_S_contig6089:4107..42041681463848.1240554-CDS-Ecto-sp13_S_contig6089:4107..4204Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 4108..4204 +
1681463848.13924-CDS-Ecto-sp13_S_contig6089:4727..48251681463848.13924-CDS-Ecto-sp13_S_contig6089:4727..4825Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 4728..4825 +
1681463848.1492543-CDS-Ecto-sp13_S_contig6089:5461..55651681463848.1492543-CDS-Ecto-sp13_S_contig6089:5461..5565Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 5462..5565 +
1681463848.1600742-CDS-Ecto-sp13_S_contig6089:6363..64971681463848.1600742-CDS-Ecto-sp13_S_contig6089:6363..6497Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 6364..6497 +
1681463848.173825-CDS-Ecto-sp13_S_contig6089:7110..73021681463848.173825-CDS-Ecto-sp13_S_contig6089:7110..7302Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 7111..7302 +
1681463848.1827726-CDS-Ecto-sp13_S_contig6089:8174..83291681463848.1827726-CDS-Ecto-sp13_S_contig6089:8174..8329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6089 8175..8329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6089.16746.1

>prot_Ecto-sp13_S_contig6089.16746.1 ID=prot_Ecto-sp13_S_contig6089.16746.1|Name=mRNA_Ecto-sp13_S_contig6089.16746.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MSSVTIGDVTLSEEELQDGFSAETIFATPGSRGFTFDDIIALPGSIDFGV
EEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHANCP
PQEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNISGVPITE
DGSIGSKLVGLCTKRDLDLVDERHEPLSEHMTPVDDLILGREGCSLEEAQ
EIIKVSKKGYLPIVDAEGNLCALTTRTDLLKTRDFPHSTKDPLTGKLRVA
AAVGAGQDDR
back to top

mRNA from alignment at Ecto-sp13_S_contig6089:4108..8329+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6089.16746.1 ID=mRNA_Ecto-sp13_S_contig6089.16746.1|Name=mRNA_Ecto-sp13_S_contig6089.16746.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6089:4108..8329+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGTCAGTGACGATTGGAGATGTGACTCTGTCCGAGGAGGAGCTGCA
AGACGGCTTCAGCGCCGAGACCATCTTCGCGACGCCGGGATCTAGGGGTA
AGAGGAAAACCCAGCTGCCTTGTGGGAAGATCGGAGGTGTCTTCAGTGTT
CCCTACCAGTAGTGATCGCCTTGGCGAGGATGATATTCCTTGCTCGGAGT
ATTATTTATAGAGAGGGGGGGGGTTGTATCCCTATCCCTGAGACGAATAC
CCAAACCCCTAACCCCACCCGCTTCTACACCAAGCTTATTACTTATTACC
TCAATACCTCGCCAAGGCTTCTGTTTAGTGCTCCGCTGGTTGCGTGCTCT
CTGCTCTTTGAACCCTCCGCTCGGTTCTTGCCGATTTTATTTGGTCGTGT
GGGACAGAGGAAGATAGCCCCGCCGTGGTGGCCGGGGGACTGCTGTGGCT
TGTCGTCCCCGGTCTTGGCACAATATTGTTTTGAGGAGGGGGGGATGATG
GCATCGTCGTATTATGTGTTTGAAAGAAGAGACGCTTTTGTTGTAACCGT
GTGTTTAGCCGTCTCTTTTCGGTTTGCTATTGTGGTGGTCTTCGTGTGTG
GGCCTGCATTTTTGTGGCAGGGTTCACGTTCGACGATATCATCGCGCTGC
CGGGGTCCATCGACTTCGGCGTGGAGGAGGTCGCTCTCGACACGCGCATC
ACAAGAAACATACCCATGGTGAGAGAGAGACACGGGGAGAAGGGGGGGGA
GTAGGTCTTGTGTTGTTGTTGCTGCATCACAAGAAACATGCCCGTGGCGA
AGATCGACACAGGGAGAGGGAGAACAAGTATTAAATCTTCGTTATTGCGG
TAAAGAGTCGGCAAAGGCGGAGATGAAGGAGTAGATGGGGCTGCAGGACG
TGGCCCTTCTACTCGCTGCGGACGAGTATGCACGAGAGACAACGAGGGAA
AGAAGATCCGCGACCGTTTTCGTTGTGTTTTGCCGGCCATCTTTGCAAGG
GTATGGCGTGCAGTCAGCATTCGGCTTTGTTGGTGCCTTTTCTCCCCTTG
CTGTCGATGCTGTTGGTGTTGTCGTACTCTTGAGGTACTGTTGGGGTACT
GTTGCCGGGTATGATTATTTTGTTGCTGCGGCGATTGGTTGTTGTTTTTT
TATGTTCAAGAAGTCGAATCCAAGACAACTGCTCAAAATGTTGTTGCTGC
TGTTGGTGTTCAAGACGATGTGAAGGACATTTGTTCAAGATGTTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGG
TCCTTTGTTGTTGTTGCCGCTGCTGCTTTTGTTTCTGCTGTTGATGCGGT
CCAGGCGTTTCCGTTCGCGTCCGCGGCGATGGACACGGTGACCGAGAGTA
AGATGGCCATCGCGATGGCGCTGCAGGGGTGCATCGGCGTCCTCCACGCC
AACTGCCCGTGAGTAGACAGAGGCCTACCGACCTGCAGGGAGGGTAGATG
GCAAGCAGCAAGCAGTACTGTCGTGCCTGTGTAGCCTAGCGACGAGACGC
AACGAACCTGCAGGGAGGCGTAATGAGCAGCTCAACGGCAAACTGCCTTG
GCCGTGTAGCCCGGCAGCAAGGGAAAATCGGGATCGAGCCAATGTTGCGC
AGAAGCACTGAGCTGGCTTGTGTCTACGGCGGTGTCTTCGGGTGATCGTT
GTTGTGTTTTTTTTGCTGTGCAACGTGGTGGGGCAAGGTAGTGCCGGCTT
CAAGTCTCCGTTAGAGGCCGCTCTTGCCGCAGACCGCAACGTGGCATGAC
CATTCGTCAAGTATATGCCTCCACAGGTATCGTTGTTATTAACATGCTGC
TGTTTTGGTGCGATAGTGGATGTTGGCATCTGTTGACTATCGAAAAAGCT
CGAGGATAAACAGACAGACGATTGCAGGTTTTTTTTTTGTTGATGCGATG
GTTGTCGCATGTTTCCCAGTTCTTCTCTAGCTGGGACCAATGGTCGAGAG
GCCGGAGACGGAGCGTTATGATGGTGAAACTGCCGTTAGTGCCCTACCAC
CCTCTCGCCCCCGGCACGCGTGTTTCGCAAAGAGTTAGCCTCAACAATTT
TGTGTCTTTGTTGTTAGCATCGATCGTGCTAGCATCGATCGTGCTAGCGG
GCTAACCGAGGAAGATGCGCCAGCCTCAGTGCGACTGAAAGTAGAAAAAT
GCTTCTCAAGCCTTGCCATGATCTGGCGTGTGTGTGTGTACCCCATCCCT
GCTCAGGCCCCAAGAGCAAGTGAAGCTGGTGCAAAGGGTGAAGGGTTACG
AGAACGGTTTCATCTCTAACCCGGCGGTGATGTCCCCGACGTGCACCGTG
GCCGACCTTGACGACCTCAAGGCGGAGAGGAACATCTCGGGTACGTCCCT
CCTTGTTGGCGATGTTGTTGTCGTTCTTGTGGTTGTTGTTGTTTGGTGGT
GGCGATGATGGCGGCGGCGGCGGTGGTAGTGGTGGTGGTGGTGGTGGGTG
TGGTGGTTGTTGTTGTTGTTGTCGTTGTTGTGGTTTTCGTTGTCCTTGTT
TTTGATGTGCATGCGTTTATTTTTGAGTTTTTACGTCCGAAATCTGCTGT
TTCGTCTGGCCAGGCGCTCGCAGTAGAGGTTGGATACGTTCGTTGTTATT
ATCATCATCGTCGTCGCCGTCGTCTTTGTTAGATACATTGGTAGGTGGTA
CGTTGGTACTGCTGAATGATGTCTTCCCTGACGTTCTCTTTCAATCACGA
CCTGTGTGGTGAAGCGGAGACGGCCCTACGTTTGATGCCTCCATGGATGT
TTTCCTGAGATTTGTCCTGACTTTTTCGGGTGGATCTGACCTGATGTGGA
CTTGCTTGTAGTCTGTGACCACGACTCGACAACTCATCGCCCCCGCGACC
GCTGCCACCGCCGTTGCTACGGCTGCTGCTCTGCTGCTGCTGTTGCTGTC
GCTGCTGCTCCTGCTGCTGCTACTCCTGCTGCTGTCGCTGTTGTGCTGGT
TAGGGGTACCCATCACCGAGGACGGGTCGATAGGGTCTAAGCTGGTCGGT
CTGTGCACAAAGAGAGATCTAGACCTTGTTGACGAGAGGCACGAGCCGCT
GTCGGAGCACATGACGCCCGTAGATGATCTGATCTTGGGGAGGGAGGGGT
GTTCCCTGGAGGAGGCGCAGGAGATCATCAAGGTTTCCAAGAAGGGTGAG
TAAAGAGAGAGAGGGAGAGAGAGAGACATACTAGGCACACACGCAGACAG
GGACAGAAAGACAGACACACACATCGAGAGAGATACACACAAAGAGAGTA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGACATCGACGGAG
ACAGAGGCAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAAGAGAGA
CAGAGATGGATGACGGAAAGACATCGACATAAGAGAGAGGGAGAACAGGC
AGACAGACAGACAGACAGATGTAGACACGGCGAGAGGGAGAGGGCCCGGT
CAGGCAAGAATAGGGTACTGTTTTGGAATATTTTGTCTCATGTTTTTATG
CGCGTGCTCCGTCGAGAGGGGGGGCAATAGACGACGGAGCGGCGAAATGA
GGCAACTTTTTTTCTCCATTGCAGAATGTTTTTGGCTGCGCTATTTGTTC
ATGTCAAGCGATATATGTTGCTTTGTTTTCATGTCGGCTATGGGGGTAGG
ATGATGCTCCGGAATTTCGTTCGAAGACTGTGAGTCTAGCCTACCCAACC
CGCCCTTTCTACCCCGGCAGTTGATTGCTTGACCGCCTCCCCGCCTCGCT
GCAATCAAGTACCACGTGCAGAAGAGGCCGCCGTATAGTGCCGGTATGTG
ACCAGAAAATTCACGGGCTCTGCACCGGACCGGTACACTTCAAAGCACTG
ACAATGACTTGGAAATTCAGTGTGTATGCCCGCCGGAAACACTTGCACCA
TACCGGGCACCGGTATTTTGGAACCGGCCCTTAAAAGAGACCTCTGCTCT
ATATTTACCCCCCCCGCTATCATACCACCCTCCGTCACGCTTACACCCCG
CCCGTGCCTCTCTCTAGGCTACCTGCCAATCGTGGACGCCGAGGGTAACC
TCTGCGCCTTGACCACACGCACCGACCTCCTCAAGACGAGGGACTTCCCG
CACAGCACCAAGGACCCGCTCACCGGCAAGCTGAGGGTCGCTGCTGCCGT
AGGAGCGGGCCAAGACGACCGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6089:4108..8329+

>mRNA_Ecto-sp13_S_contig6089.16746.1 ID=mRNA_Ecto-sp13_S_contig6089.16746.1|Name=mRNA_Ecto-sp13_S_contig6089.16746.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6089:4108..8329+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGTCAGTGACGATTGGAGATGTGACTCTGTCCGAGGAGGAGCTGCA
AGACGGCTTCAGCGCCGAGACCATCTTCGCGACGCCGGGATCTAGGGGGT
TCACGTTCGACGATATCATCGCGCTGCCGGGGTCCATCGACTTCGGCGTG
GAGGAGGTCGCTCTCGACACGCGCATCACAAGAAACATACCCATGGCGTT
TCCGTTCGCGTCCGCGGCGATGGACACGGTGACCGAGAGTAAGATGGCCA
TCGCGATGGCGCTGCAGGGGTGCATCGGCGTCCTCCACGCCAACTGCCCG
CCCCAAGAGCAAGTGAAGCTGGTGCAAAGGGTGAAGGGTTACGAGAACGG
TTTCATCTCTAACCCGGCGGTGATGTCCCCGACGTGCACCGTGGCCGACC
TTGACGACCTCAAGGCGGAGAGGAACATCTCGGGGGTACCCATCACCGAG
GACGGGTCGATAGGGTCTAAGCTGGTCGGTCTGTGCACAAAGAGAGATCT
AGACCTTGTTGACGAGAGGCACGAGCCGCTGTCGGAGCACATGACGCCCG
TAGATGATCTGATCTTGGGGAGGGAGGGGTGTTCCCTGGAGGAGGCGCAG
GAGATCATCAAGGTTTCCAAGAAGGGCTACCTGCCAATCGTGGACGCCGA
GGGTAACCTCTGCGCCTTGACCACACGCACCGACCTCCTCAAGACGAGGG
ACTTCCCGCACAGCACCAAGGACCCGCTCACCGGCAAGCTGAGGGTCGCT
GCTGCCGTAGGAGCGGGCCAAGACGACCGG
back to top