prot_Ecto-sp13_S_contig6076.16731.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6076.16731.1
Unique Nameprot_Ecto-sp13_S_contig6076.16731.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6076.16731.1 vs. uniprot
Match: D8LNH8_ECTSI (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH8_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 5.140e-22
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:    1 VRDVEESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLH 47
            VRD+EESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLH
Sbjct:   40 VRDLEESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLH 86
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BLAST of mRNA_Ecto-sp13_S_contig6076.16731.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.940e-19
Identity = 47/55 (85.45%), Postives = 47/55 (85.45%), Query Frame = 0 
Query:    1 VRDVEESKRVNANVQDRLAQRQTGEAQKEDAR--------QHFWPHLLGEDMRLH 47
            VRDVEESKRVNANVQDRLAQRQTGEAQKEDAR        QHFWPHLLGEDMRLH
Sbjct:  201 VRDVEESKRVNANVQDRLAQRQTGEAQKEDARCLDAVMVSQHFWPHLLGEDMRLH 255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6076.16731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNH8_ECTSI5.140e-2297.87Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A6H5KJM3_9PHAE3.940e-1985.45Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6076contigEcto-sp13_S_contig6076:7444..8555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6076.16731.1mRNA_Ecto-sp13_S_contig6076.16731.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6076 7444..8555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6076.16731.1 ID=prot_Ecto-sp13_S_contig6076.16731.1|Name=mRNA_Ecto-sp13_S_contig6076.16731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
VRDVEESKRVNANVQDRLAQRQTGEAQKEDARQHFWPHLLGEDMRLH
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