prot_Ecto-sp13_S_contig6064.16714.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6064.16714.1
Unique Nameprot_Ecto-sp13_S_contig6064.16714.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6064.16714.1 vs. uniprot
Match: D8LCQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ7_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 2.550e-82
Identity = 165/202 (81.68%), Postives = 174/202 (86.14%), Query Frame = 0 
Query:    1 AITKDTGSPGHREIPEKGVLSSLGTADGPAKEAGAENEKMSALSNAERELAVVTESGNAPTREERRSGGRGRVRGADGPGGXXXXXXXXXXXXXEGFAVGVVEMLRERAAAASLAAEVARKDGDRARVDLEAFKERVASVEELLSKSKAAEFDSASRVSEAEQNCARLRMQLQARERQIAELREISQGNLNRAKHRRKQCAW 202
            AITKDTG PGHREI EK VLSSLGT + PAKEA  ENEKM ALSNAERELAV T+SGNAPTRE RRSGG G V GADG G      XXXXX   EGFAVG VE+LRERAAAASLAAEVARKDGDRARV+LEAFKERVASVEELLSKSKA   DSAS+VSEAEQ CARLRMQLQARERQIA+L+E+S+GNLNRAKHRRKQCAW
Sbjct:  454 AITKDTGYPGHREILEKSVLSSLGTVEAPAKEAVEENEKMRALSNAERELAVETQSGNAPTREGRRSGGCGGVLGADGLG------XXXXXGNDEGFAVGAVEILRERAAAASLAAEVARKDGDRARVELEAFKERVASVEELLSKSKATAADSASKVSEAEQTCARLRMQLQARERQIAQLQELSRGNLNRAKHRRKQCAW 649
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6064.16714.1 vs. uniprot
Match: A0A6H5KWY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY2_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 8.300e-81
Identity = 158/202 (78.22%), Postives = 166/202 (82.18%), Query Frame = 0 
Query:    1 AITKDTGSPGHREIPEKGVLSSLGTADGPAKEAGAENEKMSALSNAERELAVVTESGNAPTREERRSGGRGRVRGADGPGGXXXXXXXXXXXXXEGFAVGVVEMLRERAAAASLAAEVARKDGDRARVDLEAFKERVASVEELLSKSKAAEFDSASRVSEAEQNCARLRMQLQARERQIAELREISQGNLNRAKHRRKQCAW 202
            AITK TG PGHREIPE GV++SL T DGPAKEAGAENE+MSALSNAERELAV TESGN P RE RRS  R  V GADG                EGFAV VV+MLRERA AASLAAEVARK+GDRARV+LEA KERVASVEELLSKSKAAE DSASRVSEAEQ CARLRMQL ARERQIAELREISQGNL+RAKHRRKQC+W
Sbjct:  411 AITKGTGYPGHREIPEMGVMTSLETVDGPAKEAGAENEEMSALSNAERELAVETESGNVPKREGRRSSDRRDVGGADG------LRDGDGGGNEEGFAVRVVQMLRERATAASLAAEVARKEGDRARVELEALKERVASVEELLSKSKAAEVDSASRVSEAEQTCARLRMQLLARERQIAELREISQGNLDRAKHRRKQCSW 606
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6064.16714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCQ7_ECTSI2.550e-8281.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWY2_9PHAE8.300e-8178.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..185
NoneNo IPR availableCOILSCoilCoilcoord: 130..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6064contigEcto-sp13_S_contig6064:2..2446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6064.16714.1mRNA_Ecto-sp13_S_contig6064.16714.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6064 2..2446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6064.16714.1 ID=prot_Ecto-sp13_S_contig6064.16714.1|Name=mRNA_Ecto-sp13_S_contig6064.16714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
AITKDTGSPGHREIPEKGVLSSLGTADGPAKEAGAENEKMSALSNAEREL
AVVTESGNAPTREERRSGGRGRVRGADGPGGGAGRGGGNGGGNDEGFAVG
VVEMLRERAAAASLAAEVARKDGDRARVDLEAFKERVASVEELLSKSKAA
EFDSASRVSEAEQNCARLRMQLQARERQIAELREISQGNLNRAKHRRKQC
AW*
back to top