mRNA_Ecto-sp13_S_contig60591.16704.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig60591.16704.1
Unique NamemRNA_Ecto-sp13_S_contig60591.16704.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A6H5JE99_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE99_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 4.200e-76
Identity = 117/125 (93.60%), Postives = 119/125 (95.20%), Query Frame = 1
Query:    1 QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEGDERKGGTGKARSSSGASEHRSLGEQSGRVPVDRELVHIDYDGPDDGDRVVLEKRL 375
            +AHAHFIGIDPAHRGAGLGALLYD FFKAVQT GCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEGDER GGTGKARSSSGASEHR L E SGRVPVDRELVH+DYDGPDDGDRVVLEKRL
Sbjct:  109 EAHAHFIGIDPAHRGAGLGALLYDQFFKAVQTHGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEGDERTGGTGKARSSSGASEHRFLSEHSGRVPVDRELVHLDYDGPDDGDRVVLEKRL 233          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A208Y806_9BURK (GNAT family N-acetyltransferase n=1 Tax=Pigmentiphaga sp. NML080357 TaxID=2008675 RepID=A0A208Y806_9BURK)

HSP 1 Score: 83.6 bits (205), Expect = 7.990e-18
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 1
Query:    4 AHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVP 186
            A+ HF+G+DPA RG GLG +LY+HFF  V+  GC   H++TSPAN+ S+AFH+ +GFE  P
Sbjct:   69 AYIHFVGVDPARRGGGLGRMLYEHFFDVVRALGCEEAHSITSPANSGSIAFHRKMGFELEP 129          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A7W0TVK6_9CHLR (GNAT family N-acetyltransferase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TVK6_9CHLR)

HSP 1 Score: 83.6 bits (205), Expect = 9.420e-18
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query:    7 HAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEG 210
            + HF+G+DPA RGAG+G  LY  F  A +T GC  VHAVT+P N AS+AFH+ +GFEA+P  A  AEG
Sbjct:   73 YVHFVGVDPAVRGAGIGQALYVRFGDAARTLGCREVHAVTAPTNAASIAFHRRLGFEALPGDAATAEG 140          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: UPI001FE5531B (GNAT family N-acetyltransferase n=1 Tax=Amycolatopsis anabasis TaxID=1840409 RepID=UPI001FE5531B)

HSP 1 Score: 78.2 bits (191), Expect = 9.250e-16
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 1
Query:    1 QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEG 210
            QA+ HF+GIDP  RG GL   LY+ FF A +  G T VHA+TSPANT S+AFH  +GFE V A  PD +G
Sbjct:   76 QAYIHFVGIDPEFRGRGLARRLYETFFAAARAAGRTEVHAITSPANTNSIAFHTKLGFE-VSAPQPDYDG 144          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A859FIY3_9BACI (GNAT family N-acetyltransferase n=1 Tax=Bacillus sp. M4U3P1 TaxID=2592382 RepID=A0A859FIY3_9BACI)

HSP 1 Score: 76.6 bits (187), Expect = 3.740e-15
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    1 QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPD 201
            +A+ HFIG+DP  R   +G  LY+ FFK VQ +G T+V AVTSP NTAS+AFH  IGFE     A D
Sbjct:   68 EAYVHFIGVDPNARRGQVGKQLYEQFFKTVQAKGATVVRAVTSPINTASIAFHTRIGFEVEKGDATD 134          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: UPI001C5EEBDF (GNAT family N-acetyltransferase n=1 Tax=Nonomuraea ceibae TaxID=1935170 RepID=UPI001C5EEBDF)

HSP 1 Score: 76.3 bits (186), Expect = 4.390e-15
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 1
Query:    1 QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAI 192
            +A+ HF+G+ P  R AGLG  LY  FF   +  GC +V A+TSP NTAS+AFH+ +GFE  P +
Sbjct:   70 EAYIHFVGVSPRERAAGLGRRLYGRFFDLAREHGCHVVRAITSPVNTASIAFHRRLGFEVSPPV 133          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: UPI0011EF1562 (GNAT family N-acetyltransferase n=1 Tax=Actinomadura sp. K4S16 TaxID=1316147 RepID=UPI0011EF1562)

HSP 1 Score: 75.9 bits (185), Expect = 5.650e-15
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 1
Query:    4 AHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPD 201
            A+ HF+G++PA RGAGL   LY+ FF   +  G T V A+TSP NT S+AFHKA+GF A PA A D
Sbjct:   67 AYIHFVGVNPAFRGAGLARRLYEDFFALARADGRTTVRALTSPQNTGSIAFHKAMGFTAGPAPAHD 132          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A222VSA8_9PSEU (Predicted acetyltransferase, GNAT superfamily n=1 Tax=Prauserella marina TaxID=530584 RepID=A0A222VSA8_9PSEU)

HSP 1 Score: 76.6 bits (187), Expect = 6.680e-15
Identity = 47/124 (37.90%), Postives = 60/124 (48.39%), Query Frame = 1
Query:    4 AHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEGDERKGGTGKARSSSGASEHRSLGEQSGRVPVDRELVHIDYDGPDDGDRVVLEKRL 375
            A+ HF+G+DP  RG G+   LY  FF A +  G  +VHAVTSP NT S+AFH+A+GF  +P       GD                  R++         D   VH DYDG +  DRV  E  L
Sbjct:   82 AYIHFVGVDPQRRGLGIARTLYRQFFAAAERAGKLVVHAVTSPGNTGSIAFHRALGFRLLP-------GD------------------RTVDNADDTGNTDDVTVHSDYDG-EGQDRVCFELAL 179          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: A0A127QN51_9BURK (N-acetyltransferase domain-containing protein n=1 Tax=Collimonas arenae TaxID=279058 RepID=A0A127QN51_9BURK)

HSP 1 Score: 77.8 bits (190), Expect = 6.980e-15
Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 1
Query:    4 AHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVP 186
            A+ HF+G+ PA R  GL  +LY+HFF  V  RGCT VH++TS  NTAS+AFH+ +GF  +P
Sbjct:  157 AYIHFVGVTPAARADGLARMLYEHFFNVVGARGCTEVHSITSVVNTASIAFHRKLGFTLLP 217          
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Match: UPI000929D7A6 (Predicted acetyltransferase, GNAT superfamily n=1 Tax=Mycobacteroides abscessus TaxID=36809 RepID=UPI000929D7A6)

HSP 1 Score: 75.1 bits (183), Expect = 7.130e-15
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 1
Query:    1 QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASVAFHKAIGFEAVPAIAPDAEGDERKGG 228
            QA+ HF+G+DPAHRG G+G  LYD FF   +  G ++V A+TSP NTAS+ +H A+GF   P       GD+  GG
Sbjct:   37 QAYIHFVGVDPAHRGRGVGRHLYDLFFTQARDAGRSVVKAITSPRNTASIRYHAALGFVLQP-------GDKEVGG 105          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60591.16704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE99_9PHAE4.200e-7693.60N-acetyltransferase domain-containing protein n=2 ... [more]
A0A208Y806_9BURK7.990e-1855.74GNAT family N-acetyltransferase n=1 Tax=Pigmentiph... [more]
A0A7W0TVK6_9CHLR9.420e-1857.35GNAT family N-acetyltransferase n=1 Tax=Chloroflex... [more]
UPI001FE5531B9.250e-1657.14GNAT family N-acetyltransferase n=1 Tax=Amycolatop... [more]
A0A859FIY3_9BACI3.740e-1555.22GNAT family N-acetyltransferase n=1 Tax=Bacillus s... [more]
UPI001C5EEBDF4.390e-1550.00GNAT family N-acetyltransferase n=1 Tax=Nonomuraea... [more]
UPI0011EF15625.650e-1556.06GNAT family N-acetyltransferase n=1 Tax=Actinomadu... [more]
A0A222VSA8_9PSEU6.680e-1537.90Predicted acetyltransferase, GNAT superfamily n=1 ... [more]
A0A127QN51_9BURK6.980e-1554.10N-acetyltransferase domain-containing protein n=1 ... [more]
UPI000929D7A67.130e-1548.68Predicted acetyltransferase, GNAT superfamily n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60591contigEcto-sp13_S_contig60591:437..814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start0
Seed ortholog score81.6
Seed ortholog evalue2.8e-13
Seed eggNOG ortholog404589.Anae109_4177
Preferred nameyqjY
Model size378
KEGG koko:K06977
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564
Exons1
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs1PYGZ@1224,2WZR5@28221,2Z2JT@29,435DK@68525,COG0454@1,COG0456@2
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-28_000410.1
Cds size378
COG Functional cat.K
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463844.0886555-CDS-Ecto-sp13_S_contig60591:436..8141681463844.0886555-CDS-Ecto-sp13_S_contig60591:436..814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig60591 437..814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60591.16704.1prot_Ecto-sp13_S_contig60591.16704.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig60591 437..814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig60591.16704.1

>prot_Ecto-sp13_S_contig60591.16704.1 ID=prot_Ecto-sp13_S_contig60591.16704.1|Name=mRNA_Ecto-sp13_S_contig60591.16704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
QAHAHFIGIDPAHRGAGLGALLYDHFFKAVQTRGCTLVHAVTSPANTASV
AFHKAIGFEAVPAIAPDAEGDERKGGTGKARSSSGASEHRSLGEQSGRVP
VDRELVHIDYDGPDDGDRVVLEKRL*
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mRNA from alignment at Ecto-sp13_S_contig60591:437..814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig60591.16704.1 ID=mRNA_Ecto-sp13_S_contig60591.16704.1|Name=mRNA_Ecto-sp13_S_contig60591.16704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60591:437..814+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGCACGCGCATTTCATCGGCATCGACCCTGCTCACAGAGGGGCGGG GCTAGGGGCGCTTCTTTACGATCATTTCTTTAAGGCGGTCCAGACTCGTG GCTGCACCCTCGTTCATGCCGTGACCAGCCCTGCTAATACCGCATCCGTG GCGTTCCACAAGGCGATCGGCTTCGAAGCGGTACCCGCTATTGCGCCCGA TGCAGAAGGTGACGAGAGAAAGGGGGGAACTGGAAAGGCGAGATCGAGCT CAGGAGCGTCGGAGCATCGTTCCTTGGGTGAACAGAGCGGAAGAGTCCCT GTTGATAGAGAGCTTGTACACATCGACTATGATGGCCCGGACGATGGGGA CAGAGTCGTTCTCGAGAAGCGTTTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60591:437..814+

>mRNA_Ecto-sp13_S_contig60591.16704.1 ID=mRNA_Ecto-sp13_S_contig60591.16704.1|Name=mRNA_Ecto-sp13_S_contig60591.16704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60591:437..814+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGCACGCGCATTTCATCGGCATCGACCCTGCTCACAGAGGGGCGGG
GCTAGGGGCGCTTCTTTACGATCATTTCTTTAAGGCGGTCCAGACTCGTG
GCTGCACCCTCGTTCATGCCGTGACCAGCCCTGCTAATACCGCATCCGTG
GCGTTCCACAAGGCGATCGGCTTCGAAGCGGTACCCGCTATTGCGCCCGA
TGCAGAAGGTGACGAGAGAAAGGGGGGAACTGGAAAGGCGAGATCGAGCT
CAGGAGCGTCGGAGCATCGTTCCTTGGGTGAACAGAGCGGAAGAGTCCCT
GTTGATAGAGAGCTTGTACACATCGACTATGATGGCCCGGACGATGGGGA
CAGAGTCGTTCTCGAGAAGCGTTTGTGA
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