mRNA_Ecto-sp13_S_contig604.16675.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig604.16675.1
Unique NamemRNA_Ecto-sp13_S_contig604.16675.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A6H5L6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K4_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 2.200e-193
Identity = 466/479 (97.29%), Postives = 468/479 (97.70%), Query Frame = 1
Query:    1 MSNLMSNIRKASLPLQESSAQLGRLLLQLGQAADSQLDAETLAELDKQASVAACHELEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----HGGAPSPLPRSARSSREASLVFPGGILSAPVRKEXXXXXXXXXXXXXXXXXXXXXXXPAAKPAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            MSNLMSNIRKASLPLQESSAQLGRLLLQLGQAADSQLDAETLAELDKQASVAAC ELEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     HGGAPSPLPRSARSSREASLVFPGGILSAPVRKE XXXXXXXXXXXXXXXXXXXX  PAAKPAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAA+ACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGA+RAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDR 
Sbjct:    1 MSNLMSNIRKASLPLQESSAQLGRLLLQLGQAADSQLDAETLAELDKQASVAACQELEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGAPSPLPRSARSSREASLVFPGGILSAPVRKEQXXXXXXXXXXXXXXXXXXXX--PAAKPAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRF 477          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: D8LGF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF2_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 4.350e-172
Identity = 282/291 (96.91%), Postives = 284/291 (97.59%), Query Frame = 1
Query:  550 HGGAPSPLPRSARSSREASLVFPGGILSAPVRKEXXXXXXXXXXXXXXXXXXXXXXXPAAKPAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            HGGAPSPLPRSARSSREASLVFPGGILSAP RK XXXXXXXXXXXXXXXXXXXXX  P AK AAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAA+ACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKI KMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGA+RAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL
Sbjct:   26 HGGAPSPLPRSARSSREASLVFPGGILSAPARKXXXXXXXXXXXXXXXXXXXXXXT-PVAKLAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIGKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 315          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A836CLB7_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.920e-61
Identity = 107/209 (51.20%), Postives = 143/209 (68.42%), Query Frame = 1
Query:  799 KLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPF-VNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            ++ VC+  A+ HL T IR+  T    F +YA+R+M +LAEE +A L + +  ITTPT AT      +N S VC VSI+RAGD+L EA +   P   VGKILIQRDE S+DKHPV++Y K P  IA+M V+LCDPMLATGGS +MA+  L++AG +  +I+F  V+  PEGI A+ +  P V IVT  +D  L++ +YI+PGLGDFGDR 
Sbjct:    6 QVTVCKHSAIPHLLTPIRDVTTSSVQFAYYASRLMALLAEEAMAMLPAQQVSITTPTGATLPDAVRINTSKVCAVSIIRAGDSLLEAVRKIAPDVHVGKILIQRDESSADKHPVMYYHKFPLGIARMPVILCDPMLATGGSVIMAVNTLLDAGCRAESIIFANVIAAPEGIEAVSSAHPAVRIVTCVIDASLNDNKYIMPGLGDFGDRF 214          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A8K1CII0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CII0_PYTOL)

HSP 1 Score: 208 bits (530), Expect = 3.480e-61
Identity = 111/215 (51.63%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  778 ALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQ-VLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDR 1419
            AL+     L V + KAL+ L  ++R+  TP   F+ YA R+MRILAEEG+A   +  + + TPT   F+   V ++++C VSI+RAGD+L +A   C PT  VGKILIQRDE S DKHP+LFY KLP +IA    VL+ DPMLAT GS L+AI+ L++AGV E  IVF+ V+ CPEGI  L   +P V +VT A+D  L+E +YI+PGLGD+GDR
Sbjct:    9 ALEGQYQTLDVLKHKALSQLLIKLRDESTPHVEFKHYADRVMRILAEEGLATCATVSETVKTPTGDAFTG-LVPQAHICAVSIIRAGDSLLDAVMKCDPTVSVGKILIQRDESSHDKHPMLFYSKLPPQIASYDHVLVVDPMLATAGSVLLAIKTLIDAGVAEEKIVFLNVISCPEGIHTLFKAYPNVKVVTAAVDRGLNEHKYIVPGLGDYGDR 222          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A7S2LGL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.920e-61
Identity = 105/208 (50.48%), Postives = 145/208 (69.71%), Query Frame = 1
Query:  802 LVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSP-FVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            L++ ESKA   LFT++R+  T P  F F+A R+MRILAE+ IA L      ITTP +        ++  N+C+VSI+RAGD+L EA +AC+P   +GKILIQR+EE+++K P L+Y KLP +I  M VLLCDPMLATGGSA  A+  L + GV  + I+F+ V+ CPEG+  L  + P+V +VT  +D+CL+E +YI+PGLGD+GDR 
Sbjct:    9 LILSESKAYDALFTKMRDVKTKPSEFEFFAKRVMRILAEDAIAQLPHKTIKITTPCSPNIEGKELMSVDNICVVSIVRAGDSLMEAVRACLPGVSIGKILIQRNEETTEKLPTLYYSKLPPRIKDMNVLLCDPMLATGGSAKAALDVLTKHGVLLSNIIFVNVICCPEGLQRLAEDVPDVKVVTACVDECLNENKYIVPGLGDYGDRF 216          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A8J5XPD7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPD7_DIALT)

HSP 1 Score: 205 bits (522), Expect = 3.330e-60
Identity = 108/203 (53.20%), Postives = 143/203 (70.44%), Query Frame = 1
Query:  814 ESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            ES+A+ HL T +R+  TP   F  +A R+MR+LAEEGIACL  +R  +TTP         +  S VC VSI+RAGD+L E  +A  P   VGK+LIQRDE+++   P LFY+KLP+ IA+M VLLCDPMLATGGSA+MAI  L++ GV+ A I+F+ V+ CPEGI  + A  P V I+T A D+ L+E+++I+PGLGDFGDR 
Sbjct:    9 ESRAITHLMTVMRDASTPHEAFAAHARRLMRLLAEEGIACLPHTRIEVTTPCGTFVGEKLLVASAVCAVSIMRAGDSLVEEVRAAWPGVRVGKLLIQRDEQTAI--PRLFYEKLPADIARMHVLLCDPMLATGGSAMMAIDALLKRGVRAAFIIFLNVLSCPEGIARVHAAHPAVQIITCATDERLNERKFIVPGLGDFGDRF 209          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A7S3V2X3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2X3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 4.460e-60
Identity = 108/211 (51.18%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  796 DKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVN---ESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDR 1419
            D LV+ +S+A+  LFT++R+++T    +  YA R+MRILAEEG+A + S    ++  T  T   P+        +C VSI+R+GD L EA +   P   VGKILIQRDE   +K P LFY KLP  +A+ +VLLCDPMLATGGSA+ A+  L++AGVK   +VF+  V CPEGI A  A+FP+V IVT A+DDCL++ +YI+PGLGDFGDR
Sbjct:   21 DNLVLVQSRAITALFTQVRDKNTDQTGYVHYADRLMRILAEEGLAHMNS----VSEKTVHTPCGPYKGLETTRKICAVSIMRSGDILLEAVRRVDPRVTVGKILIQRDEADPEKRPKLFYSKLPPDVAECEVLLCDPMLATGGSAICAVSVLIKAGVKPENLVFLNTVCCPEGISAFHAKFPQVKIVTLAIDDCLNDDKYIVPGLGDFGDR 227          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: A0A7S2S9S7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9S7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.140e-59
Identity = 108/209 (51.67%), Postives = 144/209 (68.90%), Query Frame = 1
Query:  799 KLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACL-ESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            +++  +S+AL HLFT +R+  T    F FY++R+MRILAEEGIA L +  R  +   T A F    V   NVC VSI+RAGD+L EA +AC P   VGKILIQRDE +++K P LFY KLP  +  M VLL DPMLATGGS+ MAI+ LV+ GV+E  I+F+ V+ CPEG+ A+   FP V I+T  +D  +++ +YI+PGLGD+GDR 
Sbjct:   50 EVLTVQSRALDHLFTHMRDETTGSADFAFYSSRLMRILAEEGIALLPKEQRNIVCRGTKAAFQGEVVPLDNVCAVSIVRAGDSLLEAVRACSPGMKVGKILIQRDESTAEKLPKLFYCKLPPGVEHMHVLLVDPMLATGGSSKMAIQSLVDRGVREEHIIFLNVISCPEGLKAVHDTFPGVKILTTCIDQGMNDHKYIVPGLGDYGDRF 258          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: D0MVH7_PHYIT (Uracil phosphoribosyltransferase, putative n=20 Tax=Phytophthora TaxID=4783 RepID=D0MVH7_PHYIT)

HSP 1 Score: 202 bits (515), Expect = 5.860e-59
Identity = 107/207 (51.69%), Postives = 142/207 (68.60%), Query Frame = 1
Query:  802 LVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQ-VLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDR 1419
            L V   +ALA L  ++R+  + P  F+FYA R+MRILAEEG+A   +  Q I TPT  +F+   V    VC VSI+RAGD+L ++   C PT  VGKILIQRDE+S DKHPV++Y KLP  + K+  VLL DPMLATGGS  MAI+ L++AGV++  I F+ V+ CPEG+  L   +P+V +VT  +D  L+  +YILPGLGD+GDR
Sbjct:   17 LSVLPYRALAPLQIKLRDEKSTPTEFKFYADRLMRILAEEGLAACANKTQTIVTPTGDSFTG-LVPAEKVCAVSIIRAGDSLLQSIIECDPTVSVGKILIQRDEKSEDKHPVMYYSKLPPNVEKLDNVLLVDPMLATGGSVNMAIKTLIDAGVEQRKITFLNVISCPEGLATLFNAYPDVKVVTAGLDIGLNAYKYILPGLGDYGDR 222          
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Match: E4YJX6_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4YJX6_OIKDI)

HSP 1 Score: 201 bits (510), Expect = 4.410e-58
Identity = 102/230 (44.35%), Postives = 145/230 (63.04%), Query Frame = 1
Query:  733 PAAADGPVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRMMRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 1422
            P AA+  VK       ++ D     +C SK L +LF++IR+ DT P  F FY+ R+M+++AE+ +A +      I TP           ES    VSI+RAGD++ +A +  +P  PV KILIQRDE + +K PVL+YKK P  +A    L+CDPMLATGGS +MAI+ L+E G+ E  ++F+ V+ CPEG+  L  E+P V IVTG +D  L+ +R+I+PGLGD+GDR 
Sbjct:    3 PNAAESVVKSDSPNAEVKFDHPNCQLCTSKNLPYLFSKIRHVDTAPKEFEFYSLRLMKLIAEDALALMADKEVDIPTPCGTWRGVAADPESEAFAVSIVRAGDSMLQAVRELVPGIPVAKILIQRDETTKEKTPVLYYKKWPKNVANKTALICDPMLATGGSVIMAIKSLLEIGIPEEKMIFVNVISCPEGLNRLGREYPSVKIVTGMVDPMLNSERFIVPGLGDYGDRF 232          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig604.16675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6K4_9PHAE2.200e-19397.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGF2_ECTSI4.350e-17296.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLB7_9STRA1.920e-6151.20Uracil phosphoribosyltransferase-domain-containing... [more]
A0A8K1CII0_PYTOL3.480e-6151.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2LGL4_9STRA3.920e-6150.48Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8J5XPD7_DIALT3.330e-6053.20Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3V2X3_9STRA4.460e-6051.18Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2S9S7_9STRA3.140e-5951.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D0MVH7_PHYIT5.860e-5951.69Uracil phosphoribosyltransferase, putative n=20 Ta... [more]
E4YJX6_OIKDI4.410e-5844.35Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig604contigEcto-sp13_S_contig604:17804..22252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score497.7
Seed ortholog evalue6.2e-138
Seed eggNOG ortholog2880.D8LGF2
Model size1425
KEGG rclassRC00002,RC00017,RC00063
KEGG koko:K00761,ko:K00876
KEGG ReactionR00513,R00516,R00517,R00962,R00964,R00966,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
EC2.4.2.9,2.7.1.48
Cds size1425
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463841.6559408-CDS-Ecto-sp13_S_contig604:17803..187241681463841.6559408-CDS-Ecto-sp13_S_contig604:17803..18724Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 17804..18724 +
1681463841.6698792-CDS-Ecto-sp13_S_contig604:19524..196951681463841.6698792-CDS-Ecto-sp13_S_contig604:19524..19695Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 19525..19695 +
1681463841.6826282-CDS-Ecto-sp13_S_contig604:20872..209591681463841.6826282-CDS-Ecto-sp13_S_contig604:20872..20959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 20873..20959 +
1681463841.6919734-CDS-Ecto-sp13_S_contig604:21581..217041681463841.6919734-CDS-Ecto-sp13_S_contig604:21581..21704Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 21582..21704 +
1681463841.7050745-CDS-Ecto-sp13_S_contig604:22129..222521681463841.7050745-CDS-Ecto-sp13_S_contig604:22129..22252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 22130..22252 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig604.16675.1prot_Ecto-sp13_S_contig604.16675.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig604 17804..22252 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig604.16675.1

>prot_Ecto-sp13_S_contig604.16675.1 ID=prot_Ecto-sp13_S_contig604.16675.1|Name=mRNA_Ecto-sp13_S_contig604.16675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=475bp
MSNLMSNIRKASLPLQESSAQLGRLLLQLGQAADSQLDAETLAELDKQAS
VAACHELEKAAAAAAAAAPEGGEAEESTEEEDSTAVEEVGADERNKDECV
ANEESSTATTVELSADSSHHEDAGSSSNSSGHVPQQQAGGSDSSATPGGA
DASSSSSLMRASSVHSTNSSSHAVVSSSSSSSRHGGAPSPLPRSARSSRE
ASLVFPGGILSAPVRKEEQPPPPAAGGGSEGEEVDEEEEAPAAKPAAADG
PVKVMLQGFALQADDDKLVVCESKALAHLFTRIRNRDTPPPVFRFYATRM
MRILAEEGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALA
EAAQACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPM
LATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGALRAEFPEVTIVT
GAMDDCLDEKRYILPGLGDFGDRL*
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mRNA from alignment at Ecto-sp13_S_contig604:17804..22252+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig604.16675.1 ID=mRNA_Ecto-sp13_S_contig604.16675.1|Name=mRNA_Ecto-sp13_S_contig604.16675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:17804..22252+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAACCTAATGTCGAACATTCGGAAGGCCTCGCTCCCTCTGCAAGA GAGCTCCGCCCAGCTGGGCCGGCTTCTTCTTCAGCTTGGGCAGGCGGCCG ATTCCCAGCTGGACGCCGAGACTCTCGCCGAGCTCGACAAGCAGGCTTCT GTTGCTGCGTGCCACGAGTTGGAAAAGGCTGCCGCTGCTGCTGCCGCCGC CGCTCCCGAAGGGGGCGAAGCAGAAGAAAGCACCGAGGAGGAAGATTCAA CAGCAGTAGAGGAGGTGGGGGCGGACGAAAGAAACAAGGACGAATGCGTT GCTAACGAAGAATCCTCGACGGCGACCACGGTAGAGCTGTCGGCCGATTC CTCCCACCACGAGGACGCAGGCAGCAGCAGCAACAGCAGCGGTCACGTCC CGCAGCAGCAGGCCGGCGGCAGCGACTCCAGCGCCACCCCCGGCGGCGCC GACGCTTCCTCCTCCTCTTCCCTGATGCGCGCGTCGTCAGTCCACAGCAC CAACTCTTCCTCCCACGCCGTGGTGTCGTCCTCTTCCTCCTCCTCCCGCC ATGGGGGCGCGCCGTCCCCACTGCCGCGCTCCGCCCGCAGCAGCCGGGAA GCCTCCCTGGTCTTCCCCGGCGGCATTCTCTCGGCCCCCGTAAGAAAAGA AGAACAGCCGCCACCGCCGGCGGCGGGGGGGGGCAGCGAAGGAGAAGAAG TAGATGAGGAGGAGGAGGCTCCGGCGGCGAAGCCAGCGGCGGCGGACGGA CCCGTGAAGGTGATGTTGCAAGGCTTCGCGTTGCAGGCCGACGACGACAA GCTCGTGGTGTGCGAGTCAAAGGCTCTGGCCCACCTGTTCACTAGGATCC GGAACCGAGACACGCCTCCGCCGGTGTTCCGGTTCTACGCGACCAGGATG ATGCGGATTCTGGCGGAGGAGGTGAGGCTTGTTGTGTGGTCGGACTTTCT GTGCGTCTTTATTATTCATAATAGCATCGGCCGCGCTAACCGGCTGACCA ATGAAGAGACGTCAGTCTCAGTGCGGTTCAAAACGCAAGACACGTCTAGG GGGAGGCTAAGCTATTTTCCGGATGAAAGACAGAAACGGTAGCAACAGAA GAAAACTGCACTCGTCTACGAAGACTGCCACCTTGCACCATTTGTGCGTG TGTTTCGAGAGGGTTTTCAGCTCCAACAGCTTAACCTCTCCCGCAAGGTG GGGGAAGGGGGGGAGCGTACTCGTTTTTTGCATGCGGTAGTCGCTAGCCC ATAGACCTCGCATGCCGGGACGGAGCGATATGCCAAGATTTCGCTGCCCA AGCTACTTGGGGGGAGGGGCGTGCTATTGTTTTGCATGCCTTCGCTGTTA GACCATTGACCACGCGTCCTCGAGAGGACGAAGCATAGAGGGAGGAGCGG TTTTCAGCCAACCACGGTGTGTTTGAAATTGCTGTGTGCCTTTCTCCCGC TTGCCGGGAAATGTTGAAAGGTGGTACTTCAGGGGAGAGAGGCTCACTTG TGTGATCGTGGAGCAAAAAATTCAGCACGATTAGACCTGACATGTGCTCA GAAGTAGCAGTCGCAGCAGCTATGGCGGAGCGGGAACTGTGGGCGTTGAT GATGCGGCGTGTCGCCCGTTTATTCGCCCACAGTTTTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCCCCGGTTCGACAACTCAAGGGTATCGCGTGCCTGGAGTCAAGCCGACA GTTCATCACAACCCCGACGGCAGCAACGTTCTCCAGCCCGTTCGTCAACG AGAGCAACGTGTGCATCGTGTCCATCCTAAGGGCCGGCGACGCGCTAGCG GAGGCTGCCCAGGCTTGCATTCCGACAGCTCCAGTCGGGAAGGTGCGGTG TTTTTTTTTGTGGCTGTTGCTGCTTCGGGCAGGATGGTTCCGAGTGAGTA CGAAAGTATGGTGTTTTTTGTTTCGCTGAGATTTAGAGCAAATCGACATG GAAATATGTGTCAGTCCTCTCCTAGAATGCATGTAGCGGCGTGCCGCTGT CCAATGAAAATACGCCAATCCTAGCTGTTTGCGAAATGATACATTTCATC ATGTTTCGTCTGTAGCAGTCTCCCGTTGACGAAGCGGAGGCTCGGGAAAG CTTTCACGCACGATGACTGCCGAGCCCTACATCCCATGCATGTGTTTTCT TTCTAGAGTTGTCCGGATGCTATGGCGGCGCGGTTAGCGAGTCCGATTCC AGTCCCTTTGGGTTGGTGTGATTACGGCCTGGCCACACCCATGTCTCTCA TGGGCGCTCTTGGGTACAGGAAACGAAGTCCTGAGGTTGAGTACCTTGCT TGCTGCCCAGGAAGTTGAGAGGTTCGCGGGGTGGAGGGGAGATTGACGGA GATGAAAAGTTAAGGACAAGGGCCGAGGAGAAAGGGTTGACGAGGGATAC AGCGAGGGGGGTCGATAGACTTCATGGAACACTGTAGCCTGAGGCGTGTC GGGGACAGATGCAACAGTCGTGTGGCATTTTTCTCCCTGGGTAACCGATA AGTCGACAACTAGAGAGAGGAGGAGATATTTAGAGATTTCGCGCTTGACG AAAACCCGAGCTATACCTTTGACTCACATGTTTACGAAATATATTCGTAA ACGTGTGGTCTATTTCAGCGGTGGAAAAACGGCAAACGTCTCACAGGTGA AGTATTTTACCCCCTAACACTCTTGTGCCCGGATACAGAAACCTCGACCT TGGCGCGACACCATCGCGATCAAGTGCGCTATCGTCTGAACCAGACATTC CATCGGGAGCATACATACATAATCTCTCTCGCTTTCCTCACCCCCCCCCC CCCCGGCCGTGCTGAAAAGGCGGGAAGTACATCGATAGGGCAGGGAAAAC GTTCTTGAGCCAACTCTGGCAGAGCAGTAGGAAGGAAATATTGGCCCTCG GTCACGTGGGAATAACGCTCCGTCCTCTCGAAGAAAGTGTGGTCGATAGT TACTTGCAAAACACACCACCGCCCCCGCCTGCCGTCCCCGATCCCCGGGA ATACCGTTTGTGAGAGTAGATACTGATCCAGCGCGACGAGGAGTCGAGTG ACAAGCACCCGGTGCTGTTCTACAAGAAGCTGCCCTCCAAGATAGCGAAG ATGCAGGTAGGTGAAACCGCGAGTTCTCCTAGCCATGCGAAGCATTTTTG AAGTCGGGGCGCTTTTGGGCGTGGTTAAGTACGGGCTATTGGCAAGAAGA CGCCACTGCTGTGCGAAGCTGAGCCCGGGGTTCTGTGGTGTGCATGCCAA TGCGGAGGTAGATGCTGTTGGCGCAATGCGTGTTTTGTGGGGACAGGAGA TGCCTCGCAAGCTTCTAGACAGGCCCGTCCTCGCAAAGGGATGATCATGT CGGTCACGCTGATGATGCTCCACGGAGATGGATATTTTTTCGGGCTGACA CAACGGTCAAATGTTACGATTGTGGAGGTGTTGATGGTTAAGATGGTGGG AGTGCTGGGCCAAGAACAACGAGCGTTCAGTCAACAACAGCCGCATCCGA AACATTAGACCGCATCCGAAACAACGAAAGGACTGCGAGGGGCAGCCTGT CCGAAACCCGAGTGACAGCCACACGCGTTTGCGGCAGAAAACCGAAGCGT CCGAAATGCCTAATGGTTGACGTCAGACCGTCGCGTGGTCGTTCTGTATC CTGAGGGCGTACACACGCGCCCATGTGGTGCACTTTACGCCGCAATCACC CCAAAACATGCCTTCCTTGGACGCGCAGGTGTTGCTCTGCGACCCCATGC TCGCGACAGGCGGCAGCGCTTTGATGGCGATCCGGTGTCTCGTAGAAGCC GGGGTGAAGGAGGCGGCCATCGTTTTCATCACGGTCGTGGTTTGTCCCGA GGTAAAGGAATATGCCCGCCGCGGCTTCATGCCGCTGAACAGGCGCTTGG CGTTGTGATTGGTCTGTCTCTCTCTCTCTCTCGCTTGTCGCTCGCCTCTC TGTCTGTCTCTGCCTGTCTCTGCCTGTCTCTGCCTATCTGTCTGGCTGTC TCTGGCTGGCTGTCTGGCTGTCTGTGTGTCTCTGCCGTTCTGCTGTCTCT GCCTCTGTCTCTGCCTCTGTCTCTGCCTCTGTCTCTGCCTTTGTCTCTGC TGCCTGTCTGGCTGTCTGTCTGTCTGTCTGTCTGCCTCTCTCTCTCCCTC CTCTCCTCTCTCTCTCTCTCTCTTTCTCTCTGTCACTAGGTAAAGAAATT ATATTGTTACCAACAACGCATCGGGAGCGTTTGAGGTATTGCATGGATTT TGACACTGCAAATAACGCGCGTGCAGGGGATCGGGGCCTTGCGGGCGGAG TTCCCGGAGGTGACGATAGTGACGGGTGCCATGGACGACTGCCTCGACGA GAAGCGGTACATCCTCCCTGGCCTGGGCGACTTCGGCGACAGATTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig604:17804..22252+

>mRNA_Ecto-sp13_S_contig604.16675.1 ID=mRNA_Ecto-sp13_S_contig604.16675.1|Name=mRNA_Ecto-sp13_S_contig604.16675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1425bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:17804..22252+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAACCTAATGTCGAACATTCGGAAGGCCTCGCTCCCTCTGCAAGA
GAGCTCCGCCCAGCTGGGCCGGCTTCTTCTTCAGCTTGGGCAGGCGGCCG
ATTCCCAGCTGGACGCCGAGACTCTCGCCGAGCTCGACAAGCAGGCTTCT
GTTGCTGCGTGCCACGAGTTGGAAAAGGCTGCCGCTGCTGCTGCCGCCGC
CGCTCCCGAAGGGGGCGAAGCAGAAGAAAGCACCGAGGAGGAAGATTCAA
CAGCAGTAGAGGAGGTGGGGGCGGACGAAAGAAACAAGGACGAATGCGTT
GCTAACGAAGAATCCTCGACGGCGACCACGGTAGAGCTGTCGGCCGATTC
CTCCCACCACGAGGACGCAGGCAGCAGCAGCAACAGCAGCGGTCACGTCC
CGCAGCAGCAGGCCGGCGGCAGCGACTCCAGCGCCACCCCCGGCGGCGCC
GACGCTTCCTCCTCCTCTTCCCTGATGCGCGCGTCGTCAGTCCACAGCAC
CAACTCTTCCTCCCACGCCGTGGTGTCGTCCTCTTCCTCCTCCTCCCGCC
ATGGGGGCGCGCCGTCCCCACTGCCGCGCTCCGCCCGCAGCAGCCGGGAA
GCCTCCCTGGTCTTCCCCGGCGGCATTCTCTCGGCCCCCGTAAGAAAAGA
AGAACAGCCGCCACCGCCGGCGGCGGGGGGGGGCAGCGAAGGAGAAGAAG
TAGATGAGGAGGAGGAGGCTCCGGCGGCGAAGCCAGCGGCGGCGGACGGA
CCCGTGAAGGTGATGTTGCAAGGCTTCGCGTTGCAGGCCGACGACGACAA
GCTCGTGGTGTGCGAGTCAAAGGCTCTGGCCCACCTGTTCACTAGGATCC
GGAACCGAGACACGCCTCCGCCGGTGTTCCGGTTCTACGCGACCAGGATG
ATGCGGATTCTGGCGGAGGAGGGTATCGCGTGCCTGGAGTCAAGCCGACA
GTTCATCACAACCCCGACGGCAGCAACGTTCTCCAGCCCGTTCGTCAACG
AGAGCAACGTGTGCATCGTGTCCATCCTAAGGGCCGGCGACGCGCTAGCG
GAGGCTGCCCAGGCTTGCATTCCGACAGCTCCAGTCGGGAAGATACTGAT
CCAGCGCGACGAGGAGTCGAGTGACAAGCACCCGGTGCTGTTCTACAAGA
AGCTGCCCTCCAAGATAGCGAAGATGCAGGTGTTGCTCTGCGACCCCATG
CTCGCGACAGGCGGCAGCGCTTTGATGGCGATCCGGTGTCTCGTAGAAGC
CGGGGTGAAGGAGGCGGCCATCGTTTTCATCACGGTCGTGGTTTGTCCCG
AGGGGATCGGGGCCTTGCGGGCGGAGTTCCCGGAGGTGACGATAGTGACG
GGTGCCATGGACGACTGCCTCGACGAGAAGCGGTACATCCTCCCTGGCCT
GGGCGACTTCGGCGACAGATTGTGA
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