mRNA_Ecto-sp13_S_contig6037.16667.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 2.080e-144 Identity = 257/287 (89.55%), Postives = 260/287 (90.59%), Query Frame = 1
Query: 1 TYMNNTGAAECFNCPERYYCDGSLPRGYEECPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYCEANATAYDSTPXXXXXXXXXXXXXXXXXXXXXXXXANTTMTSSEENCVDA 861
TYMNNTGAAECF+CPERYYCDGSLPRGYEE AQ+GLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCH GHYCKRKVDTAAPTTGITI+SGV EYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYCEANATAYDSTPXXXXXXXXXXXXXXXXXXXXXXXXAN TMTSSEENCVDA
Sbjct: 2118 TYMNNTGAAECFDCPERYYCDGSLPRGYEEXXXXXXXXXXXXXXXXXXXXXXXAQAGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHSGHYCKRKVDTAAPTTGITIESGV--EYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYCEANATAYDSTPXXXXXXXXXXXXXXXXXXXXXXXXANMTMTSSEENCVDA 2402
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: UPI000359E1C1 (uncharacterized protein LOC101861715 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359E1C1) HSP 1 Score: 168 bits (425), Expect = 3.590e-43 Identity = 83/207 (40.10%), Postives = 106/207 (51.21%), Query Frame = 1
Query: 91 CPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
CP GRYCE+G+ CP GT+ GL SEC CTPG +C TGLTAV GPC G++C GSE + + +TP C GTY +T V DC +CS G+YCE+TG TGPC G+Y +T PT G T G++ P YC G+ +P PC TY + G +C+ CPAGY+C
Sbjct: 5684 CPAGRYCESGSITGVGCPVGTFSFTLGLTNSSECELCTPGQYCGVTGLTAVSGPCWAGFFCSLGSEQRA-PTSQLYGDVCPAGFFCPNGTATPNPCPSGTYLDTTGAGDVGDCLSCSPGFYCESTGQTNTTGPCGAGYYXSLGANTTTPTDGTT----------GNIXPEXXYCEQGSPSPEPCPNATYVNHTGASQCYVCPAGYFC 5879
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: A0A662XLF0_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLF0_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.410e-41 Identity = 113/301 (37.54%), Postives = 144/301 (47.84%), Query Frame = 1
Query: 1 TYMNNTGAAECFNCPERYYCDGSLPRGYEECPIGRYCETGTDVPTNCPAGTYGAQSGLGFESE-CTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGI------TIDS-GVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYCEANATAYDSTPXXXXXXXXXXXXXXXXXXXXXXXXANTTMTSSEENCVDAPAGWYV 879
TY +TG A C CP ++CDG Y C CTPG+FC GL A CA G+ CP SE++ GK ++ +H+ P C GTY+ T EDC C EG C TGLVEPTG C G++CKR P++G+ T++S +++ +GG CP G YC G+ TP PC G+Y ++ G C CPAGY+C Y XXXXXXXXXXXXXXXXXXXXXX +N T C AP G ++
Sbjct: 930 TYAVSTGQAVCDGCPMGFFCDGVATDTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCTPGFFCDSVGLVAPAELCAAGFLCPPRSENAFGKTADSDTHVCPAGAYCPKGTYLPTPCPAGTYSNDTGLVRAEDCVFCDEGAXCADTGLVEPTGWCDAGYFCKRNNTQPTPSSGVVAIVLTTVNSTSLTLFFGGQSCPTGAYCPEGSITPTPCPEGSYTNVTGSSACLPCPAGYFCLLGCDGYLDYEXXXXXXXXXXXXXXXXXXXXXXSFSNRTALQDRSQCTPAPGGTFI 1230
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: A0A6P4Z2E1_BRABE (LOW QUALITY PROTEIN: uncharacterized protein LOC109474799 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z2E1_BRABE) HSP 1 Score: 162 bits (411), Expect = 2.600e-41 Identity = 99/232 (42.67%), Postives = 121/232 (52.16%), Query Frame = 1
Query: 37 NCPERYYCD----GSLPRGYEE---CPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
NC Y+C S P + CP GRYC +G+ V CP GT+ +GL SEC ACTPG++CA+TGLT G C G+YC GS D +GET XXXXXXXXXX TP AC GT+ P+ + DC CS GYYCET G T T G+T GD+CP G YC G+ +P+PC GT+ + G C+ CPAGYYC
Sbjct: 2084 NCTAGYFCTLGAWNSTPTDGDTGDICPEGRYCPSGSVVGAGCPKGTFSNMTGLTEASECRACTPGHYCADTGLTQESGQCWAGHYCLEGS-DQAKPVGETFGDEXXXXXXXXXXXDTPVACPPGTFLPTRAMEKLSDCVDCSSGYYCETPGQTNVTAEXXXXXXXXXXXXXXXXTDGVT----------GDICPEGHYCELGSPSPVPCGNGTFMNHTGASACYVCPAGYYC 2304
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: UPI001E1DF33C (LOW QUALITY PROTEIN: uncharacterized protein LOC123565532 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF33C) HSP 1 Score: 160 bits (405), Expect = 1.660e-40 Identity = 91/248 (36.69%), Postives = 113/248 (45.56%), Query Frame = 1
Query: 4 YMNNTGAAECFNCPERYYCDGSLPRGYEECPIGRYCE----------TGTDVPTN--CPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
Y + TG + C CP YYC + PI Y GT+ T CP GTYG + L S+CT C PG +C G+T G C GY+C +G+ I T +TP C VGT + ST + C AC GYYC TTGL+EPTGPC+ G+YC TA P D G + GD+C +G YC GT P+ C GT+ C C AGYYC
Sbjct: 3972 YQDETGQSSCKTCPSGYYCR------IADAPITDYTPYVXXXXXXXPNGTEWATQYGCPKGTYGTSTQLESASQCTDCDPGVYCGSVGMTVTTGNCTAGYWCISGASVPE-PIDGVTGKACPEGSYCDTGTTTPTPCPVGTMSNSTGLSSSGQCPACKGGYYCATTGLIEPTGPCNAGYYCDSGASTATPN-----DGGAT----GDVCTIGHYCPEGTDVPIQCPVGTFMQNTQASVCTNCTAGYYC 4203
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: UPI001B88C6AF (LOW QUALITY PROTEIN: uncharacterized protein LOC121388636 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C6AF) HSP 1 Score: 160 bits (405), Expect = 1.660e-40 Identity = 88/248 (35.48%), Postives = 115/248 (46.37%), Query Frame = 1
Query: 1 TYMNNTGAAECFNCPERYYCDGSLPR------GYEE---CPIGRYCETGTDVPTN--CPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
TY + + C CPE YYCDG++ G + C G YC GT CP GTY Q GL +ECT C+ G++C + GL A G C GY+ +G+ G TT +I ++ C GTYNP +C C G YC G+ P G C +YC ++ PT G T G++CPVG YC GTATPLPC G++ D+ + C C GYYC
Sbjct: 4176 TYQDEFTQSNCKQCPEGYYCDGTIQNDTICSHGVQNPSLCEPGSYCPPGTKFSAEYRCPNGTYNDQFGLKVIAECTQCSAGHYCGQEGLAAPSGLCQAGYFXSSGASVPTPGDG-TTGNICPKGDYCPAGSNSSTLCPPGTYNPVEGLTDESECKGCEPGQYCPNAGMDSPQGNCSARYYCSGNATSSLPTDGST----------GNVCPVGHYCPEGTATPLPCEPGSFTDVTLNDACSPCTPGYYC 4412
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: A0A7M7NCN3_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NCN3_STRPU) HSP 1 Score: 157 bits (398), Expect = 1.400e-39 Identity = 91/265 (34.34%), Postives = 114/265 (43.02%), Query Frame = 1
Query: 1 TYMNNTGA---AECFNCPERYYCDGS---------LPRGY----------------EECPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
TY N TG +C C YC G P Y +ECP GRYCETG+ CP GT+ Q+GL +C CT G+FC TGLTAV GPC GYYC GS + +G+ + PE C GT+ + ++DC CS G YCET G T C G Y + + P GIT GD+ +C G+ P+PC GTY + G C+ CPAG C
Sbjct: 6376 TYSNQTGLYNETQCTLCEPGMYCPGEGNITPFDYCAPGHYCTQGASSATPIDGVTGDECPAGRYCETGSITGVGCPKGTFSNQTGLMGADQCWNCTAGHFCGRTGLTAVSGPCWAGYYC-LGSSEEAAPVGKAYGDVCTPGHYCPNGTDVPEPCPPGTFLDIAEAEELDDCVLCSAGSYCETPGKTNVTAECSEGFYXSGGSNQSNPQDGIT----------GDIXXXXYFCELGSVAPVPCPNGTYVNHTGAAACYVCPAGRQC 6629
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: UPI000B457A43 (uncharacterized protein LOC110453079 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B457A43) HSP 1 Score: 157 bits (398), Expect = 1.420e-39 Identity = 92/227 (40.53%), Postives = 115/227 (50.66%), Query Frame = 1
Query: 52 YYC--DGSLPRGYEE-----CPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
YYC S P + CP G YCE G PT CP GTYG ++ L ++CTACTPG +CA GL+A +GPC G+YC SE S +G++ XXXXX P AC GTY P+ + C +C G +C +TG G C G+YC A PT GIT GD+CP G+ C G+ T C GTY + G C+ CP GYYC
Sbjct: 4246 YYCVLKSSTPSPADNITGNVCPQGTYCEEGWSSPTPCPKGTYGNRTMLPALTDCTACTPGQYCASPGLSAPDGPCLAGFYCSNASE-SANPVGQSYGDECPXXXXXPASSYEPLACPAGTYQPNVRMTNDSACLSCEPGKFCNSTGSSAVAGDCTAGYYCIAGATQAEPTGGIT----------GDICPAGSACPAGSPTHNFCPNGTYTNHTGASVCYDCPEGYYC 4461
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: A0A5D6XKV9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKV9_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.400e-39 Identity = 104/297 (35.02%), Postives = 130/297 (43.77%), Query Frame = 1
Query: 1 TYMNNTGAAECFNCPERYYCDGSLPRGYEECPIGRYCETGTD-VPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSG---VSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYCEANATAYDSTPXXXXXXXXXXXXXXXXXXXXXXXXANTTMTSSEENCVDAPAGWYV 879
TY G C DG + GT +P GT+ ++ L SEC ACTPG++C L AV G PA SED G+ +H P C GTY+ +T + ++CT C EG YC GL PTG C GHYCKR P+TG+T +G +V +GGD CPVG+YC G+A+P C GTY D G C AC GY+C Y + XXXXXXXXXXX + C AP G Y+
Sbjct: 1493 TYALEAGQTSCSPXXXXXXXDGLATDRVLDXXXXXXXXIGTAAIPXXXXXGTFSKRTRLVNASECAACTPGFYCGGVALDAVSGXXXXXXXXPAASEDKFGRTVVNDTHPCSAGAYCPEGTYLPIPCPRGTYSNATALTSAKECTLCDEGSYCADPGLTSPTGLCAAGHYCKRNNTLPNPSTGVTSPTGNVASAVLFGGDRCPVGSYCCAGSASPRQCPEGTYADEPGASVCKACAPGYFCPLGTAVYSTNKXXXXXXXXXXXKRSTEYPCSPGTFGDAAGLQRGSQCSPAPGGMYI 1789
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Match: UPI001459053E (LOW QUALITY PROTEIN: uncharacterized protein LOC117334493 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001459053E) HSP 1 Score: 154 bits (389), Expect = 2.240e-38 Identity = 85/227 (37.44%), Postives = 109/227 (48.02%), Query Frame = 1
Query: 52 YYC--DGSLPRGYEE-----CPIGRYCETGTDVPTNCPAGTYGAQSGLGFESECTACTPGYFCAETGLTAVEGPCAEGYYCPAGSEDSLGKIGETTSHIXXXXXXXXXXVSTPEACIVGTYNPSTQKRAVEDCTACSEGYYCETTGLVEPTGPCHGGHYCKRKVDTAAPTTGITIDSGVSVEYGGDLCPVGTYCGNGTATPLPCLAGTYNDLEGQEECFACPAGYYC 711
YYC S P + CP G YCE G PT CP+GTYG ++ L ++CTACTPG +CA GL+A +G C G++C SE S +G+T P AC G+Y P+ + C +C G +C TTG G C G+YC A PT G T GD+CP G+ C G+ T C GTY + G C+ CP GYYC
Sbjct: 4243 YYCVLKSSTPSPSDNITGNVCPQGTYCEEGWSSPTPCPSGTYGHRNMLPALTDCTACTPGQYCASPGLSAPDGACLAGFFCSNASE-SANPVGQTYGDECPAGFYCPTNSYEPLACPAGSYQPNVRMINESACLSCEPGKFCNTTGASAVAGDCSAGYYCIAGATQAEPTDGTT----------GDICPAGSACPAGSPTHNFCPNGTYTNHTGASVCYDCPEGYYC 4458 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6037.16667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6037.16667.1 >prot_Ecto-sp13_S_contig6037.16667.1 ID=prot_Ecto-sp13_S_contig6037.16667.1|Name=mRNA_Ecto-sp13_S_contig6037.16667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp MNNTGAAECFNCPERYYCDGSLPRGYEECPIGRYCETGTDVPTNCPAGTYback to top mRNA from alignment at Ecto-sp13_S_contig6037:5927..8587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6037.16667.1 ID=mRNA_Ecto-sp13_S_contig6037.16667.1|Name=mRNA_Ecto-sp13_S_contig6037.16667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2661bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6037:5927..8587- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6037:5927..8587- >mRNA_Ecto-sp13_S_contig6037.16667.1 ID=mRNA_Ecto-sp13_S_contig6037.16667.1|Name=mRNA_Ecto-sp13_S_contig6037.16667.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6037:5927..8587- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |