prot_Ecto-sp13_S_contig5979.16553.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5979.16553.1
Unique Nameprot_Ecto-sp13_S_contig5979.16553.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1304
Homology
BLAST of mRNA_Ecto-sp13_S_contig5979.16553.1 vs. uniprot
Match: D7G4T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T4_ECTSI)

HSP 1 Score: 684 bits (1765), Expect = 2.350e-232
Identity = 401/470 (85.32%), Postives = 417/470 (88.72%), Query Frame = 0
Query:  838 TPCSSQSRRHRERSAREQDCGRLTNQVVAKGTIAISPPTTTEDEAHDLYYRSPRPRKKKNRSTTADGQEDTTLLDLAEVAVSWLPPXXXXXXXXXXXXXXXXXXXXXXXXSPCPSDCNDEGSTEXXXXXXXXXXRNGGPVGDKKDGYGEDSNEHSWASRDSSRWAFGRCQSVARVGGTPPKDGCWGEMRPTGGATAATETTTPAEERKDTDGRRGGEESSGELQGNRNLEERGGWAGSDDGSAARRRADEVLARISALEVYFDRIEDQVVRTPLAPEKVGAQVPERVKFSKGRSSDAA-SNSCSNPTLGVGKRGGQGEILLADVETTQAQGHTGDYSSKALARGDRPSSPPPLPKDTQTRTHKR-DDGEEEVLLNEEHSVANSDLRTSALRRQIDAAAVPPAMLELSLLEAGRRTLSRGLEVCDVGNGAGVSRGGNGDSSSGGTEEQHNKFYFDVGRTMMLDTL-RTAGR 1304
            T  SSQSRRHRERSAREQDCGRL NQVVA GTIAISPPTTTEDEAHDLYYRSPRPRK K RSTTAD QEDT LLDLAEVAVSWLPPXXXXXXXXXXXXXXXXXXXXXX  SPCPSDCN EGST   XXXXXX  RNGGPVG KKDGYGEDSNEHSWAS+DSSRWA+GRCQSVAR+ GTPPKDGC GEMRPTGGATAATETTTP EE KDTDGRRGG ESSGELQGNRNLEERGGWAGSD+GSAARRRADEVLARISALEVYFDR+EDQVVRT  AP    AQVP RV  SKGRSSDAA SNSCSNPTLGVG RGGQGEILLA+VET Q +G TG  SSKALARGDRPSSPPPLP+D+QTRT K+ DDGEEEVL +EE++VANS LRT A RR  DAAAVPPAMLELS  +AGR TLSRG EVCDVGNGAGVSRGGNG+SSSGGT EQHNKFYFDVGRTM+LDT  RTAGR
Sbjct:    2 TASSSQSRRHRERSAREQDCGRLKNQVVADGTIAISPPTTTEDEAHDLYYRSPRPRKNKGRSTTADSQEDTALLDLAEVAVSWLPPXXXXXXXXXXXXXXXXXXXXXXASSPCPSDCNVEGSTGTPXXXXXXCPRNGGPVGGKKDGYGEDSNEHSWASKDSSRWAYGRCQSVARIDGTPPKDGCRGEMRPTGGATAATETTTPVEEHKDTDGRRGGRESSGELQGNRNLEERGGWAGSDEGSAARRRADEVLARISALEVYFDRVEDQVVRTAPAPAAAEAQVPGRVPLSKGRSSDAAASNSCSNPTLGVGNRGGQGEILLAEVETAQTEGQTGGDSSKALARGDRPSSPPPLPRDSQTRTRKKKDDGEEEVLSSEEYAVANSGLRTLAPRRSNDAAAVPPAMLELSPSKAGRGTLSRGFEVCDVGNGAGVSRGGNGESSSGGTNEQHNKFYFDVGRTMVLDTFQRTAGR 471          
BLAST of mRNA_Ecto-sp13_S_contig5979.16553.1 vs. uniprot
Match: A0A6H5L561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L561_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 5.850e-194
Identity = 373/547 (68.19%), Postives = 385/547 (70.38%), Query Frame = 0
Query:  864 VVAKGTIAISPPTTTEDEAHDLYYRSPRPRKKKNRSTTADGQEDTTLLDLAEVAVSWLPPXXXXXXXXXXXXXXXXXXXXXXXXSPCPSDCNDEGSTEXXXXXXXXXXRNGGPVGDKKDGYGEDSNEHSWASRDSSRWAFGRCQSVARVGGTPPKDGCWGEMRPTGGATAATETTTPAEERKDTDGRRGGEESSGELQGNRNLEERGGWAGSDDGSAARRRADEVLARISALEVYFDRIEDQVVRTPLAPEKVGAQVPERVKFSKGRSSDAA-SNSCSNPTLGVGKRG--------------------------------------------------------------------------------------------------------GQGEILLADVETTQAQGHTGDYSSKALARGDRPSSPPPLPKDTQTRTHKRDDGEEEVLLNEEHSVANSDLRTSALRRQIDAAAVPPAMLELSLLEAGRRTLSRGLEVCDVGNGAGVSRGGNGDSSSGGTEEQHNKFYFDVGRTMMLDTL-RTAGR 1304
            +VA+GTIAISPPTTTEDEAHDLYYRSPRP + K RST AD QEDT LLDLAEVAVSWLPPXXXXXXXXXXXXX     XXXX  SPCPSDCN EGST  XXXXXXXXXRNGGPV  KKDGYGEDSNE+SWASRDSSRWA  RCQ VARV GTPPKDGC GEMRPTGGAT ATETT PAEE KDTDGRRGGE+SSGELQGNRNLEERGGWAGSD+GSAARRRADEVLARISALE+YFDR+EDQVVRTP AP   GAQ P  V  SKGRS DAA SNSCSNPTLGVGKRG                                                                                                        G  EILLADVETTQ +GHTG  SSK LARGDRPSSPPPLP+DTQTRTHK DDGEEEVL +EEHSVANS LRT A RR  DAAAVPPAMLELSLLEAGR TLSRG E CDVGNGA VSRGGNGDSSSGG +EQH KFYFDVGRTMMLDT  RTAGR
Sbjct:    1 MVAEGTIAISPPTTTEDEAHDLYYRSPRPHESKGRST-ADSQEDTALLDLAEVAVSWLPPXXXXXXXXXXXXXQRASIXXXXPSSPCPSDCNVEGSTGTXXXXXXXXXRNGGPVVGKKDGYGEDSNEYSWASRDSSRWADCRCQGVARVDGTPPKDGCRGEMRPTGGATVATETTNPAEEHKDTDGRRGGEKSSGELQGNRNLEERGGWAGSDEGSAARRRADEVLARISALEIYFDRVEDQVVRTPPAPATAGAQAPGHVTLSKGRSFDAAESNSCSNPTLGVGKRGEVEREWVGSREPLPFEKRKCLRTQWIMACQLHFRNTSFDYSVVFSRSHPRASNKTSRIPVKRRSASKGTVVSQTIRQIKASSQHVLPPARPRQCPNTIHFVATGGHAEILLADVETTQTEGHTGYDSSKDLARGDRPSSPPPLPRDTQTRTHKVDDGEEEVLSSEEHSVANSGLRTPAPRRPNDAAAVPPAMLELSLLEAGRGTLSRGFEGCDVGNGASVSRGGNGDSSSGGAKEQHKKFYFDVGRTMMLDTYQRTAGR 546          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5979.16553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4T4_ECTSI2.350e-23285.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L561_9PHAE5.850e-19468.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5979contigEcto-sp13_S_contig5979:732..5784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5979.16553.1mRNA_Ecto-sp13_S_contig5979.16553.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5979 732..5784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5979.16553.1 ID=prot_Ecto-sp13_S_contig5979.16553.1|Name=mRNA_Ecto-sp13_S_contig5979.16553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1304bp
GGTRRHSPEPTKIPAAEEPLDGSGGNAGINWGESDVGSSRRDIVIRAQLT
APRMGVADEAVCSSAPTTFVLSFGVSRRPQSGAVSHGSPLGLVEHHHLGN
TVDGEKQEAVRVLPRGREEPSGDETNDVSAGVLIEAGKPAVNTLAPPPIH
TTEFDRKHFPYLGNRGAAVWRRERATVQNVDIAFPAEARSSLSQDGANPP
QPQLDLECHRSDGGGGSSSDGPSVRYEVKAQANDDDVSRASSPGACVRKR
LADRSVSSLLRRCHPPPRGPSVRGATSRGGSGRVDCEGPDVENRIAPFSF
GRSVVKNVASEIGKGITAEGGNPPLWGKGDAQGPERSSEGEGSTQADACP
RQHVLGPTGSAPAGTSLCLPSRQESTRTCPNAAKVLQATKSPKGACFPEQ
QEGHGEGVVSAEPRTLRVSSAQIAAACAHDVACVDDQPADKVLASLEGKP
PSKRSGRRDVGGRTALPRTVSGEYPEHNASDRQPEDGTLVPLEGYGRDIG
EPWMPVRRGTTAGPPAEESRARSALQELPRRQLDALTVTASSSDSPGPST
PPSSRCLLLPLPCTPSLLQLEATGDVVVHGNGHEKGEVCPAESMVPEVPL
GCAILEGSTTRTVPTGPLAASSAAGFSWQPASSEALPLSPPALRSKQPIA
ATVGVGVELGPRAGLDSSVELLSPPTTDKDASSPLPPLLVHYRRPYWSAG
VDAGSQAGTDRENAEHSCTTPAASPDNRTQGASEAAAETAPAIAKHERIA
NSAIDDRQPLREDQQQQQQQQQQQHGLEPAMDLGSHVEPIARSSDQSDCS
NFARKGGLQRHLQRYPPPPGPPPSPIRALRQRKTSPKTPCSSQSRRHRER
SAREQDCGRLTNQVVAKGTIAISPPTTTEDEAHDLYYRSPRPRKKKNRST
TADGQEDTTLLDLAEVAVSWLPPPTPPPPEARRRRRQRASMPPPSPSSPC
PSDCNDEGSTETRPSPPPPRPRNGGPVGDKKDGYGEDSNEHSWASRDSSR
WAFGRCQSVARVGGTPPKDGCWGEMRPTGGATAATETTTPAEERKDTDGR
RGGEESSGELQGNRNLEERGGWAGSDDGSAARRRADEVLARISALEVYFD
RIEDQVVRTPLAPEKVGAQVPERVKFSKGRSSDAASNSCSNPTLGVGKRG
GQGEILLADVETTQAQGHTGDYSSKALARGDRPSSPPPLPKDTQTRTHKR
DDGEEEVLLNEEHSVANSDLRTSALRRQIDAAAVPPAMLELSLLEAGRRT
LSRGLEVCDVGNGAGVSRGGNGDSSSGGTEEQHNKFYFDVGRTMMLDTLR
TAGR
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