mRNA_Ecto-sp13_S_contig59779.16551.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig59779.16551.1
Unique NamemRNA_Ecto-sp13_S_contig59779.16551.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A6H5KRE0_9PHAE (Quinolinate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.300e-23
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRLSESEIGCSLAEAAERKAYEAWLRKASAT NSMHVVYINTSLVTKALSH
Sbjct:  206 VYRLSESEIGCSLAEAAERKAYEAWLRKASATANSMHVVYINTSLVTKALSH 257
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: D7FHH3_ECTSI (Quinolinate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.240e-22
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRLSESEIGCSLAEAAERKAYEAWLRKASAT NSMHVVYINTSLVTKALSH
Sbjct:  196 VYRLSESEIGCSLAEAAERKAYEAWLRKASATANSMHVVYINTSLVTKALSH 247
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A836CLI9_9STRA (Quinolinate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.600e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRLSE EIGCSLA AAE+  YEAWLRKA+ T NS+HVVYINTSL+TKA SH
Sbjct:  174 VYRLSEKEIGCSLAGAAEKLEYEAWLRKAAKTPNSLHVVYINTSLITKAKSH 225
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A2D4C0A3_PYTIN (Quinolinate synthase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0A3_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 8.240e-14
Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRLSES+IGCSLAE+AE++AY A+L+KA+ T NS+HVVYINTSL +KA +H
Sbjct:  155 VYRLSESKIGCSLAESAEKQAYIAYLQKAAKTPNSLHVVYINTSLRSKAFAH 206
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A7S2UTF8_9STRA (Quinolinate synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTF8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-13
Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRL +++IGCSLA AAER+AY AWL + + T NS+HVVYINTSLV+KA SH
Sbjct:  151 VYRLQQNKIGCSLAAAAERQAYTAWLDQGAKTPNSLHVVYINTSLVSKARSH 202
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: K3X0N9_GLOUD (Quinolinate synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0N9_GLOUD)

HSP 1 Score: 72.0 bits (175), Expect = 2.050e-13
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRL+E +IGCSLAE+AER+AY A+L+KAS T NS+H+VYINTSL +KA +H
Sbjct:   89 VYRLAEQKIGCSLAESAERQAYIAYLQKASKTPNSLHIVYINTSLRSKAYAH 140
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A8K1CLD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLD6_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 2.100e-13
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRL+E +IGCSLAEAAE++AY A+L+KA+ T NS+HVVYINTSL +KA +H
Sbjct:  155 VYRLAEQKIGCSLAEAAEKQAYVAYLQKAAKTPNSLHVVYINTSLRSKAFAH 206
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BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A0P1B3Y3_PLAHL (Quinolinate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3Y3_PLAHL)

HSP 1 Score: 71.6 bits (174), Expect = 2.870e-13
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRL+E +IGCSLAE+AE+KAY A+L+KA+ T NS+H+VYINTSL +KA +H
Sbjct:  155 VYRLAEQKIGCSLAESAEKKAYLAYLQKAAKTPNSLHIVYINTSLRSKAFAH 206
[Close]
BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A5D6XN82_9STRA (Quinolinate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN82_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.880e-13
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYRL+E +IGCSLAE+AER+AY A+L+KA+ T NS+HVVYINTSL +KA +H
Sbjct:  153 VYRLAEQKIGCSLAESAERQAYIAYLQKAAKTPNSLHVVYINTSLRSKAFAH 204
[Close]
BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Match: A0A2D9TBK0_9DELT (Quinolinate synthase n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TBK0_9DELT)

HSP 1 Score: 71.2 bits (173), Expect = 3.910e-13
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 1 
Query:    4 VYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKALSH 159
            VYR+++ EIGCSLAE+AE++AY A+L +AS T  SMHVVYINTSLVTKA +H
Sbjct:  124 VYRVAQEEIGCSLAESAEKQAYGAYLMQASETPRSMHVVYINTSLVTKAKAH 175
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59779.16551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRE0_9PHAE1.300e-2398.08Quinolinate synthase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FHH3_ECTSI1.240e-2298.08Quinolinate synthase n=1 Tax=Ectocarpus siliculosu... [more]
A0A836CLI9_9STRA1.600e-1678.85Quinolinate synthase n=1 Tax=Tribonema minus TaxID... [more]
A0A2D4C0A3_PYTIN8.240e-1471.15Quinolinate synthase n=2 Tax=Pythium insidiosum Ta... [more]
A0A7S2UTF8_9STRA1.310e-1369.23Quinolinate synthase (Fragment) n=1 Tax=Fibrocapsa... [more]
K3X0N9_GLOUD2.050e-1369.23Quinolinate synthase n=1 Tax=Globisporangium ultim... [more]
A0A8K1CLD6_PYTOL2.100e-1369.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1B3Y3_PLAHL2.870e-1367.31Quinolinate synthase n=1 Tax=Plasmopara halstedii ... [more]
A0A5D6XN82_9STRA2.880e-1369.23Quinolinate synthase n=1 Tax=Pythium brassicum Tax... [more]
A0A2D9TBK0_9DELT3.910e-1369.23Quinolinate synthase n=1 Tax=Sandaracinus sp. TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59779contigEcto-sp13_S_contig59779:627..785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score100.1
Seed ortholog evalue3.2e-19
Seed eggNOG ortholog2880.D7FHH3
Preferred nameQS
Model size159
KEGG rclassRC01119
KEGG koko:K03517
KEGG ReactionR04292
KEGG Pathwayko00760,ko01100,map00760,map01100
KEGG ModuleM00115
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009060,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009507,GO:0009536,GO:0009893,GO:0009987,GO:0015980,GO:0016043,GO:0016053,GO:0016226,GO:0017144,GO:0018130,GO:0019222,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0022607,GO:0030234,GO:0031163,GO:0031323,GO:0031325,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0042762,GO:0042802,GO:0042803,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051176,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0098772,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
Exons1
EggNOG free text desc.quinolinate synthetase A activity
EggNOG OGs2QPQ6@2759,COG0379@1
EC2.5.1.72
Cds size159
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463830.790941-CDS-Ecto-sp13_S_contig59779:626..7851681463830.790941-CDS-Ecto-sp13_S_contig59779:626..785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig59779 627..785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59779.16551.1prot_Ecto-sp13_S_contig59779.16551.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig59779 627..785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig59779.16551.1

>prot_Ecto-sp13_S_contig59779.16551.1 ID=prot_Ecto-sp13_S_contig59779.16551.1|Name=mRNA_Ecto-sp13_S_contig59779.16551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
QVYRLSESEIGCSLAEAAERKAYEAWLRKASATTNSMHVVYINTSLVTKA
LSH
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mRNA from alignment at Ecto-sp13_S_contig59779:627..785+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig59779.16551.1 ID=mRNA_Ecto-sp13_S_contig59779.16551.1|Name=mRNA_Ecto-sp13_S_contig59779.16551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59779:627..785+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTACCGCCTGTCGGAGTCCGAGATTGGCTGCAGCCTTGCAGAGGC
GGCGGAGCGCAAGGCTTACGAGGCTTGGCTCAGGAAGGCCTCGGCCACCA
CGAACTCCATGCACGTGGTCTACATCAACACATCCCTCGTCACCAAGGCC
CTGTCGCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig59779:627..785+

>mRNA_Ecto-sp13_S_contig59779.16551.1 ID=mRNA_Ecto-sp13_S_contig59779.16551.1|Name=mRNA_Ecto-sp13_S_contig59779.16551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59779:627..785+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGTACCGCCTGTCGGAGTCCGAGATTGGCTGCAGCCTTGCAGAGGC
GGCGGAGCGCAAGGCTTACGAGGCTTGGCTCAGGAAGGCCTCGGCCACCA
CGAACTCCATGCACGTGGTCTACATCAACACATCCCTCGTCACCAAGGCC
CTGTCGCAC
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