prot_Ecto-sp13_S_contig5968.16536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5968.16536.1
Unique Nameprot_Ecto-sp13_S_contig5968.16536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length256
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5968.16536.1 vs. uniprot
Match: D7G6V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V9_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 2.400e-85
Identity = 183/203 (90.15%), Postives = 185/203 (91.13%), Query Frame = 0 
Query:   53 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQELAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARGEASKSGEISEAPAEEAAEEEACLPSPDALPAKRPRSTIXXXXXXXXXXXXXXXXXXXXXXAVKSPGGGLA 255
            MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQE+AREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARGEAS SGEISEA     AEEEACLPSP+           XXXXXXXXXXXXXXXXXXXXX AVKSPGGGLA
Sbjct:    1 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARGEASTSGEISEA----TAEEEACLPSPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVKSPGGGLA 199
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5968.16536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6V9_ECTSI2.400e-8590.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..50
NoneNo IPR availableCOILSCoilCoilcoord: 119..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5968contigEcto-sp13_S_contig5968:3653..8486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5968.16536.1mRNA_Ecto-sp13_S_contig5968.16536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5968 2447..8651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5968.16536.1 ID=prot_Ecto-sp13_S_contig5968.16536.1|Name=mRNA_Ecto-sp13_S_contig5968.16536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
MSADEAVLAERTRQHREMRLKGNKDLKDRVEELKLKLQNERERMQKEFES
QLMAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEV
KRKMAEEMERDRELYAQRAALAEEGQELAREERNQLQAEKESLLRQLKET
MEMDDASRRRIILKFKAREHAMRKNFEAELREARGEASKSGEISEAPAEE
AAEEEACLPSPDALPAKRPRSTIKSKSKIASSSASPSMTAAPTMAAVKSP
GGGLA*
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