mRNA_Ecto-sp13_S_contig5967.16535.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5967.16535.1
Unique NamemRNA_Ecto-sp13_S_contig5967.16535.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A6H5JE56_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE56_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 3.670e-131
Identity = 196/201 (97.51%), Postives = 197/201 (98.01%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLR ENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDAS AAGVVLDALAVA AGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSK+RQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMR YMPP
Sbjct:  198 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASTAAGVVLDALAVACAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKRRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRKYMPP 398          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A3L7X5T9_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X5T9_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 5.590e-57
Identity = 98/200 (49.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMP 600
            IA+PL ALAA  G PPL TH + VLHNW RLDP GP+   N+A  C F GGLDE WF++  +E+EARG     A L+ Q A+A+ D+      AA  +++ L    A +++M  AL RMP  C P +FY R+RPFL+GWK  P LPDG++YEG+ ++ +QY+G SAAQS LFP  D  L V+H+  ++  +L +MR YMP
Sbjct:  110 IALPLGALAAQLGRPPLCTHATTVLHNWRRLDPDGPIALGNVATLCGFFGGLDEAWFFLVALEVEARGAPAVVASLQLQAAVADLDAD-----AATEIMEHL---HATLLAMTAALRRMPERCAPFVFYNRLRPFLAGWKDEPLLPDGLIYEGMGTQPQQYFGASAAQSALFPLFDEVLGVAHAPGNAGGYLRQMRGYMP 301          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A836CBY0_9STRA (Indole 2,3-dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY0_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.780e-51
Identity = 115/247 (46.56%), Postives = 130/247 (52.63%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVA----RAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVS-----------------------------------------SKKRQYYGGSAAQSTLFPALDAALEVSHS-AHSSNAFLLEMRDYMPP 603
            IAVPL  LAA  G+PP++TH SLVL+NW RLDP G L A NLA  C FLGG DE WFY++TVEIEARGG    ALL+AQ A                    LA         +  MR AL RM  GC P  FY RVRPFLSGW+ANPTLP GV Y GV                                          S +  +YGGSAAQS+LF ALDAAL ++H  A +  AFL  MR YMPP
Sbjct:  151 IAVPLWRLAADMGVPPVMTHLSLVLYNWRRLDPRGALDATNLAAACQFLGGHDEAWFYLTTVEIEARGGPAMAALLQAQRAATXXXXXXXXXXXXXXXCAELAACLRAVEGAVHGMRGALRRMSDGCDPRAFYHRVRPFLSGWRANPTLPRGVQYTGVPASSAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARACFYGGSAAQSSLFAALDAALGIAHDGAGAGAAFLANMRAYMPP 397          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A3L7XP59_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7XP59_9CHLR)

HSP 1 Score: 177 bits (448), Expect = 1.450e-50
Identity = 94/199 (47.24%), Postives = 118/199 (59.30%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYM 597
            IA+PL  LAA  G PPL TH + VLHNW RLDP GP+   N+A    F GGLDE WF + T+E+EARG       LE Q A+A  D        A    +AL    A +  M  AL RM   C P +F+ R+RPFL+GWK  P LPDG++YEG S +  QY+G SAAQS LFP  D  L ++H   ++  +L +MR YM
Sbjct:  110 IALPLGTLAAQLGRPPLCTHATTVLHNWRRLDPDGPIELGNVATLAGFFGGLDEAWFLLVTLEVEARGAPAVVCGLELQAAVAALD--------ADAATEALERMHAILQDMTAALQRMYERCAPFVFFNRLRPFLAGWKDEPLLPDGLIYEGFSPQPLQYFGASAAQSALFPLFDEVLGIAHDPGNAGGYLRQMRSYM 300          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A388Q5D8_9CHLR (Indoleamine 2,3-dioxygenase 2 n=3 Tax=Anaerolineae TaxID=292625 RepID=A0A388Q5D8_9CHLR)

HSP 1 Score: 176 bits (446), Expect = 2.880e-50
Identity = 92/199 (46.23%), Postives = 123/199 (61.81%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYM 597
            IA+PL  LAA  G PP+ TH + VLHNW RLDP+GP+   N+A    F GGLDE WF++ T+ +EARG       L+ Q A+   D       AA  VL+ +    A +++M EAL RM   C P +F+ R+RPFL+GWK  P LPDG++YEG+  + RQY+G SAAQS LFP  D  L ++H    +  +L +MR YM
Sbjct:  110 IALPLGTLAAQLGRPPICTHATTVLHNWRRLDPSGPIELGNVATLAGFFGGLDEAWFFLVTLAVEARGAPAVVYSLQLQAAVLALDV-----EAATEVLERM---HATLLAMMEALRRMHERCAPFVFFNRLRPFLAGWKDEPLLPDGLIYEGMGVEPRQYFGASAAQSALFPLFDEVLGITHDPGHAGGYLGQMRSYM 300          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A1F5V0E2_FRAXR (Uncharacterized protein n=1 Tax=Fraserbacteria sp. (strain RBG_16_55_9) TaxID=1817864 RepID=A0A1F5V0E2_FRAXR)

HSP 1 Score: 173 bits (438), Expect = 2.360e-49
Identity = 99/201 (49.25%), Postives = 123/201 (61.19%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            IAVPL  LA   G PP+ T+ S+VL+NW RLD A  +   NLAC   F+GGLDE WFY+ +VEIEA+G     AL+  Q AI+        +  A  V   L    + I S+R+ L RM   C P IFY R+RP+L+GW A      GVVYEGV+ K  ++YGGSAAQS L  ALDAAL V H+   +N +LLEMR YM P
Sbjct:   87 IAVPLCQLAGLVGRPPITTYASIVLNNWRRLDEAESIELSNLACRQLFVGGLDEQWFYLISVEIEAKGAPALSALVATQQAIS--------AGRADDVWSHLKTVASVIGSIRDTLMRMYENCDPHIFYYRIRPYLTGWNA-----PGVVYEGVTDKPLKFYGGSAAQSPLIQALDAALGVRHTDQDTNPYLLEMRRYMSP 274          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A136KDT4_9BACT (Indoleamine 2,3-dioxygenase n=2 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A136KDT4_9BACT)

HSP 1 Score: 170 bits (430), Expect = 8.410e-48
Identity = 96/204 (47.06%), Postives = 124/204 (60.78%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSS---KKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            +A+P  A+A   G PP+L++ S  LHNW RLDP  P+   NLA   +FLGGLDE WF +  VEIEA  G     L++AQ+A  E             VL  L    A   +M E L RMP  C P I+Y RVRPF+ GWK NPTLP+G+VYE VS+   + +Q+ G + +QS++ PALDA L VSH+      +L+EMRDYMPP
Sbjct:  107 LALPWYAVAQQLGRPPVLSYASYALHNWRRLDPNRPIELGNLALVQNFLGGLDEEWFVLVHVEIEAEAGPGLKGLVDAQNAALEDHPDG--------VLKGLRGLAAAQEAMCETLLRMPERCDPYIYYSRVRPFIHGWKNNPTLPEGLVYEHVSAYGGRPQQFRGETGSQSSIVPALDAGLGVSHAEDPLTQYLMEMRDYMPP 302          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A0R2PUC3_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A0R2PUC3_9ACTN)

HSP 1 Score: 168 bits (426), Expect = 1.630e-47
Identity = 92/205 (44.88%), Postives = 122/205 (59.51%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLD-ALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSS---KKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            +A P  A+    G PP+L+++S  + NW RLDP GP+   N+A    FLGG DE WF +  ++IE + GG   A+ +AQHA+A  D+           LD AL   R GI +M + LARMP  C P +++ RVRP++ GWK NP LP+GVVYEGVS    K   Y G + AQS + PALD AL + H       +L+EMR YMPP
Sbjct:   83 LAKPWYAVGQLVGRPPILSYSSYSIDNWRRLDPKGPIECGNIALLQCFLGGQDEEWFILIHIDIEKKAGGALQAIEDAQHAVAANDADK---------LDTALRDLRDGIQAMYDVLARMPEKCDPYVYFHRVRPYIFGWKNNPALPNGVVYEGVSELGGKGMSYRGETGAQSAIVPALDGALGIEHERDELREYLMEMRTYMPP 278          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: A0A523F9E5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523F9E5_9PROT)

HSP 1 Score: 168 bits (425), Expect = 4.430e-47
Identity = 95/204 (46.57%), Postives = 122/204 (59.80%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSSK---KRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            IAVP   LA   G PP+L++ S  L NW R+DP GP+  ENLA   +FLGG DE WF +  VEIE R      A+  A  A+A  D+  D  AAA      LA   A + +M E L RMP  C P +++ RVRP++ GWK NP +PDGVVYEGV +     R++ G + AQS + PA+DAAL + H       +L+EMRDYMPP
Sbjct:  100 IAVPWFQLAQRLGRPPVLSYASYALDNWRRIDPNGPIEIENLAIAQNFLGGADEDWFILIHVEIEVRAAPAIRAIPAALGAVARDDA--DGLAAA------LAEMEASLAAMIETLRRMPEFCDPYVYFHRVRPYIHGWKDNPAVPDGVVYEGVGAYGGVARKFRGETGAQSGIIPAIDAALGIVHEHDRLRVYLMEMRDYMPP 295          
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Match: D8PBE2_9BACT (Uncharacterized protein n=4 Tax=Nitrospira TaxID=1234 RepID=D8PBE2_9BACT)

HSP 1 Score: 167 bits (423), Expect = 9.370e-47
Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 1
Query:    1 IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLDALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVVYEGVSS---KKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMPP 603
            +A+P  A+A   G PP+L++ S  LHNW RLDP  P+   N+    +FLGGLDE WF +  ++IEA+ G     +L+A HA A  +   D       VL+ L V      +MRE L RMP  C P I+Y RVRP++ GWK +P+LP GVVYEGV+    + +Q+ G + +QS++ P LDA L +SH+      +L+EMRDYMPP
Sbjct:  107 LALPWVAVAQQLGRPPVLSYASYALHNWRRLDPHKPIELGNVVLLQNFLGGLDEEWFVLIHIDIEAKAGPGLVGMLQAHHA-ARDNKPDD-------VLEGLQVLAVAQEAMRETLLRMPERCDPYIYYSRVRPYIHGWKNSPSLPQGVVYEGVADYAEQPQQFRGETGSQSSIVPVLDAGLGISHADDPLTQYLMEMRDYMPP 302          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5967.16535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE56_9PHAE3.670e-13197.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3L7X5T9_9CHLR5.590e-5749.00Uncharacterized protein n=2 Tax=Chloroflexi bacter... [more]
A0A836CBY0_9STRA1.780e-5146.56Indole 2,3-dioxygenase n=1 Tax=Tribonema minus Tax... [more]
A0A3L7XP59_9CHLR1.450e-5047.24Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A388Q5D8_9CHLR2.880e-5046.23Indoleamine 2,3-dioxygenase 2 n=3 Tax=Anaerolineae... [more]
A0A1F5V0E2_FRAXR2.360e-4949.25Uncharacterized protein n=1 Tax=Fraserbacteria sp.... [more]
A0A136KDT4_9BACT8.410e-4847.06Indoleamine 2,3-dioxygenase n=2 Tax=unclassified N... [more]
A0A0R2PUC3_9ACTN1.630e-4744.88Uncharacterized protein n=2 Tax=Actinobacteria Tax... [more]
A0A523F9E5_9PROT4.430e-4746.57Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
D8PBE2_9BACT9.370e-4744.12Uncharacterized protein n=4 Tax=Nitrospira TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5967contigEcto-sp13_S_contig5967:6363..8063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score394.0
Seed ortholog evalue4.1e-107
Seed eggNOG ortholog2880.D8LIV6
Preferred nameIDO2
Model size603
KEGG rclassRC00356
KEGG koko:K00463
KEGG ReactionR00678,R02702,R02909,R03628
KEGG Pathwayko00380,ko01100,ko05143,map00380,map01100,map05143
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009108,GO:0009117,GO:0009165,GO:0009308,GO:0009310,GO:0009435,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019441,GO:0019637,GO:0019674,GO:0019752,GO:0033754,GO:0034354,GO:0034627,GO:0034641,GO:0034654,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0051186,GO:0051188,GO:0051213,GO:0055086,GO:0055114,GO:0070189,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606
Exons3
EggNOG free text desc.Indoleamine 2,3-dioxygenase
EggNOG OGs2CNCE@1,2QV6W@2759
EC1.13.11.52
Cds size603
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463829.4436204-CDS-Ecto-sp13_S_contig5967:6362..65931681463829.4436204-CDS-Ecto-sp13_S_contig5967:6362..6593Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5967 6363..6593 +
1681463829.4573567-CDS-Ecto-sp13_S_contig5967:7251..74761681463829.4573567-CDS-Ecto-sp13_S_contig5967:7251..7476Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5967 7252..7476 +
1681463829.4674184-CDS-Ecto-sp13_S_contig5967:7916..80631681463829.4674184-CDS-Ecto-sp13_S_contig5967:7916..8063Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5967 7917..8063 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5967.16535.1prot_Ecto-sp13_S_contig5967.16535.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5967 6363..8063 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5967.16535.1

>prot_Ecto-sp13_S_contig5967.16535.1 ID=prot_Ecto-sp13_S_contig5967.16535.1|Name=mRNA_Ecto-sp13_S_contig5967.16535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRAENLACNCHFLG
GLDETWFYISTVEIEARGGGVFGALLEAQHAIAEADSGSDASAAAGVVLD
ALAVARAGIVSMREALARMPVGCHPLIFYQRVRPFLSGWKANPTLPDGVV
YEGVSSKKRQYYGGSAAQSTLFPALDAALEVSHSAHSSNAFLLEMRDYMP
P
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mRNA from alignment at Ecto-sp13_S_contig5967:6363..8063+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5967.16535.1 ID=mRNA_Ecto-sp13_S_contig5967.16535.1|Name=mRNA_Ecto-sp13_S_contig5967.16535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1701bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5967:6363..8063+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATTGCCGTCCCGCTGGCGGCGCTGGCGGCAGCAGAGGGGATGCCGCCGCT TCTCACACACACCTCCCTGGTGCTGCACAACTGGCACCGGCTGGACCCCG CCGGACCTCTTCGCGCGGAGAACCTGGCCTGTAATTGTCACTTCTTGGGT GGGCTCGATGAGACGTGGTTTTACATCTCTACGGTCGAGATCGAGGCCAG GGGGGGGGGCGTGTTCGGAGCTCTGCTGGAGGTGCGTGGGGAAACGATGC GCTACGGAGTACACACACGCGTGCTGATGACGCGTTTTGTGGACCCACCT TTTTGGATGCAAGTAGAGTTCGATTTTGATCGATCACGGTACTACGGTGT TCTTCTCGACATAAAGAGAGTGGTGGACATCAAATGAAGTAAAAGACAGT TTTTCTGGCGCACCATTCTTATTCGCGCGGCATCAAATCCGTTTGTTGTG CCGTCGGCTCTTGTGACCATTACCTGGTCTCCTTCTCCCAGGATTCGGTC GATCGTTGATGGGTTTCTCGCATGGACTGCTTACTGCCTTGCCCTCTTTT TGCATCAGCCAACAACTGCTGTCAGCACGGCGGTCTTGCTGGTTCCTGAA AATCTCGACACCATCTACTTCTTCAATCGCCTAAAACCCAGTTGACGATT CCCCCTTCAACATCGCCTCCGTCGACGCTGTCCCCCACCCCCACCCCCCC GCGGAATCCCGTCTCCTTGTTGTTGTTGTCTTCACATTGTACAACCGTTC CGGTCTCGGCTCAGTACCTCCTACTGTCCGTGCTGGTCCAACTGACCCAG ACCCCTTCAGTGATCAAAAGCGAAGTACCCGAATATGACGAATTACTACC CGCCCCAAGACCAAGACTTTTGCGTTACTACCCAGGCAGGCTCAACACGC CATCGCAGAGGCTGACAGCGGCAGCGACGCATCGGCGGCGGCGGGGGTGG TGCTCGATGCCCTCGCCGTGGCTCGCGCCGGGATCGTGAGCATGCGGGAG GCTCTGGCGAGGATGCCGGTCGGGTGCCATCCGCTCATCTTCTACCAGCG GGTCAGGCCGTTCCTGTCAGGGTGGAAGGCGAACCCGACCCTCCCCGACG GGGTCGTGTACGAGGTATGGTTGTACAGCAGTGGTAGCGGTCCGGATGTG TTGCGGTCGCGAATAGCGCGGTTCTCGATGTATGACCGTAAGAGTTCCTT TGCACAACTCATCCCAATCGGGCTTGCAGCGATCGACCCACCGCTCTTAC TCGCCACCGCGGCGGCAGCTCGATGCCATCACCGTGTAGATTGGGAAAAG CGTCGAGGAGAGAATAACCAATCCAGCTGGTGTGTATTTAGTTTCTACTA CAGTGCCCAGTGGTGTCCTAGGAGGTGCCATCCTCGCGTGATGGCCACCG GCGCAAGCATGATCCCAACCGACCCCGCCTCTCCTCACCCCTGTGTACCC CCTCCCTCTCTCCCTCCCCCCGCCCCGCCCCGATGGAAATCGAAAATTGG GTCCCAAACATTTGTCGCGCCCCCTTCCCGCATCCCTCCGCTTGTCGAGA TCAGGGTGTTAGCTCGAAGAAACGGCAGTACTACGGCGGCAGCGCGGCTC AGAGCACCCTGTTCCCCGCCCTCGACGCGGCGCTGGAGGTGTCCCACTCG GCGCACTCGTCCAACGCCTTCCTGCTGGAAATGCGCGACTACATGCCTCC A
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5967:6363..8063+

>mRNA_Ecto-sp13_S_contig5967.16535.1 ID=mRNA_Ecto-sp13_S_contig5967.16535.1|Name=mRNA_Ecto-sp13_S_contig5967.16535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5967:6363..8063+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATTGCCGTCCCGCTGGCGGCGCTGGCGGCAGCAGAGGGGATGCCGCCGCT
TCTCACACACACCTCCCTGGTGCTGCACAACTGGCACCGGCTGGACCCCG
CCGGACCTCTTCGCGCGGAGAACCTGGCCTGTAATTGTCACTTCTTGGGT
GGGCTCGATGAGACGTGGTTTTACATCTCTACGGTCGAGATCGAGGCCAG
GGGGGGGGGCGTGTTCGGAGCTCTGCTGGAGGCTCAACACGCCATCGCAG
AGGCTGACAGCGGCAGCGACGCATCGGCGGCGGCGGGGGTGGTGCTCGAT
GCCCTCGCCGTGGCTCGCGCCGGGATCGTGAGCATGCGGGAGGCTCTGGC
GAGGATGCCGGTCGGGTGCCATCCGCTCATCTTCTACCAGCGGGTCAGGC
CGTTCCTGTCAGGGTGGAAGGCGAACCCGACCCTCCCCGACGGGGTCGTG
TACGAGGGTGTTAGCTCGAAGAAACGGCAGTACTACGGCGGCAGCGCGGC
TCAGAGCACCCTGTTCCCCGCCCTCGACGCGGCGCTGGAGGTGTCCCACT
CGGCGCACTCGTCCAACGCCTTCCTGCTGGAAATGCGCGACTACATGCCT
CCA
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