prot_Ecto-sp13_S_contig5964.16530.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5964.16530.1
Unique Nameprot_Ecto-sp13_S_contig5964.16530.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length578
Homology
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 711 bits (1835), Expect = 2.100e-244
Identity = 455/533 (85.37%), Postives = 458/533 (85.93%), Query Frame = 0
Query:   55 LEASEAAKRKAKEXXXXXXXXXXXXXXXXXXXXXXXXXXX--HIVAPVPERGTSEERVAAGLSGATXXXXXXXXXXXXXXXXXASLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPP-NPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQATGRRLVEDFYRSKGIEPTLLQPTSSAIAAAAAA--GRPGGVVSRARLPDPMMPTEAMIGHLGRGRTMTGAGPAAAAA-GMRAPSGAIPQGARQVAQXXXXXXXXXXXXXXXXXXXVDVSGGELPQLLRAARCEHHLERFQRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXAA---GRPETSAQRVVTVVRGTSGGVATPVEVGDDDXXXXXX-DGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLRR 577
            LEASEAAKRK   XXXXXXXXXXXXXXXXXXXXX        HIVAPVPERG S ERVA+GLS AT         XXXXXXXXASLVVDMSLEVRL+KAIERGNALAVQAIHDEADQTPGADMKK+KKKCKKWLNKKEGEMREEQQRLLQANQPP NPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLK YADKTGHDVVITGSPQAT RRLVEDFYRSKGIEPT L P             GRPGGV  RARLPDPMMPTEAMIGHLGRGRTM  AGPAAAAA GMRAPSGAIPQGAR VAQ       XXXXXXXX    VDVSGGELPQLLRAARCEHHLERF RDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXX     GR E  AQRVVTVVRGTSGGVATP EV DDD    X  DGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLRR
Sbjct:  546 LEASEAAKRKXXXXXXXXXXXXXXXXXXXXXXXXPPGSKRQEHIVAPVPERGMSGERVASGLSEATAGPPAMTGGXXXXXXXXASLVVDMSLEVRLRKAIERGNALAVQAIHDEADQTPGADMKKMKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKPYADKTGHDVVITGSPQATARRLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAVAGPAAAAAAGMRAPSGAIPQGARPVAQPVVYGGGXXXXXXXX----VDVSGGELPQLLRAARCEHHLERFLRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXXXXXXGRRENLAQRVVTVVRGTSGGVATPFEVEDDDVDEDXDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLRR 1074          
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 598 bits (1542), Expect = 2.180e-202
Identity = 381/454 (83.92%), Postives = 390/454 (85.90%), Query Frame = 0
Query:   96 IVAPVPERGTSEERVAAGLSGATXXXXXXXXXXXXXXXXXASLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPP-NPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQA--TGRRLVEDFYRSKGIEPTLLQPTSSAIAAAAAA----GRPGGVVSRARLPDPMMPTEAMIGHLGRGRTMTGAGPAAAAAGMRAPSGAIPQGARQVAQXXXXXXXXXXXXXXXXXXXVDVSGGELPQLLRAARCEHHLERFQRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXAAGRP------ETSAQRVVTVVRGTSGGVATPVEVGDDDXXXXXXDGLDPDHPDTCKICMDALVGI 536
            IVAPVPERGTS  RVA GLS AT        XXXXXXXXXASLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPP NPALGLRQAGPGFGVPTPP+AA    QRPT+YEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQA  TGRRLVEDFYRSKGIEPTLLQP S             GRPGGV  RARLPDPMMPTEAMIGHLGRGRTM GAGPAAA  GMRAPSGAIPQGAR VAQXXXXXX    XXXXXXXXXVDVSG ELPQLLRAARCEHHLERF+RDQLDGEVLLEMERR+FDRMGVTEAEQ RI+SALKHAG+GXXXXXXXX           E SAQRV  VVRG SG +ATPVEV +D XXXXX DGLDPDHPDTCKICMDALVG+
Sbjct:  447 IVAPVPERGTSGARVATGLSEATAGPPAMKGXXXXXXXXXASLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPMAA----QRPTEYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAGAGPAAAV-GMRAPSGAIPQGARPVAQXXXXXXMFGGXXXXXXXXXVDVSGVELPQLLRAARCEHHLERFKRDQLDGEVLLEMERREFDRMGVTEAEQGRIMSALKHAGDGXXXXXXXXXXXXXXXXXXRENSAQRVAAVVRGASGVMATPVEV-EDXXXXXXSDGLDPDHPDTCKICMDALVGL 894          
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 3.530e-100
Identity = 214/442 (48.42%), Postives = 256/442 (57.92%), Query Frame = 0
Query:  137 SLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPPNPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQA--TGRRLVEDFYRSKGIEPTLLQPTSSAIAAAAAAGRPGGVVSRARLPDPMMPTEAMIGHLGRGRTMTGAGPAAAAAGMRAPSGAIPQGARQVAQXXXXXXXXXXXXXXXXXXXVDVSGGELPQLLRAARCEHHLERFQRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXAAGRPETSAQRVVTVVRGTSGGVATPVEVGDDDXXXXXXDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLR 576
            +L+ DMSLEVRLKKAI+ GN LAVQ+I+DEADQTPGA MKKIKKKC+++LNKK GE     Q+L QA+QP  P  G                    AQRPTQ++MFCPN IA Q+IG+ GQTVN+LMK+SRA+IV+K Y D++G+DV+ITG+P A  T +RLVE+FYRSKG +P+ L P SSA+AA  A G      +RAR   P+               +                  +  GA                            GGEL QLLR A CEHHLERF+ DQLDGEVLL M+RRDF+RMGVTE EQ RIL+ALK                                SGG        D D       GLDPDHPDTCKIC+DALV ILFLPCAHQCTC RCGS + GKPCI+CR+ V + Q VI+LR
Sbjct:  678 ALLADMSLEVRLKKAIDSGNTLAVQSIYDEADQTPGASMKKIKKKCQRYLNKKAGE----DQKLQQASQPA-PVRGAXXXXXXXXXXX--------AQRPTQHDMFCPNNIAPQLIGKQGQTVNKLMKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAARKAEG------ARARPAQPVTGGPXXXXXXXXXXVV------------------VEDGAW---------------------------GGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTEGEQIRILNALKG-------------------------------SGGXXXXXXXXDSD-------GLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 1017          
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.180e-58
Identity = 166/442 (37.56%), Postives = 199/442 (45.02%), Query Frame = 0
Query:  209 PALGLRQAG-------PGFGVPTPPVAAAA--AAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAT-----------------------------------GR------------------------------RLVEDFYRSKGIEPTLLQPTSSAIAAAAAAGRPGGVVSRARLPDPMMPTEAMIGHLGRGRTMTGAGPAAAAAGMRAPSGAIPQGARQVAQXXXXXXXXXXXXXXXXXXXVDVSGGELPQLLRAARCEHHLERFQRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXAAGRPETSAQRVVTVVRGTSGGVATPVEVGDDDXXXXXXDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLR 576
            P LGLR AG       P   V T  V A    A   P+   +     IA Q+IG+ GQTV++LMKESRA+IV+K Y D++G+DVVITG+P A                                    GR                              R+ E+FYRSKG +PT L P SSA+AAA  A       +RAR   P+               +                  +  GA                            GGEL QLLR A CEHHLERF+ DQLDGEVLL M+RRDF+RMGVT  EQ RIL+ALK +G G                                  V+  D+D      DGLDPDHPDTCKIC+DALV ILFLPCAH CTC RCGS + GKPCI+CR+ V + Q VI+LR
Sbjct:    6 PILGLRPAGKDDNTSSPDQNVFTDAVLARVGHAVLAPSPSPLLRAQNIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARKAEG-----ARARPAQPVTGXXXXXXXXXXXXVV------------------VEDGAW---------------------------GGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTVGEQIRILNALKGSGAGG---------------------------------VDDSDEDS-----DGLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 359          
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.380e-13
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0
Query:  137 SLVVDMSLEVRLKKAIERG---------NALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGE 192
            +L+  MSLEVRLKKAI+ G         N LAVQ+I+DEADQTPGA +KKIKKKCKKWLNKKEGE
Sbjct: 1071 ALLAHMSLEVRLKKAIDSGVSEAVGWPSNTLAVQSIYDEADQTPGASIKKIKKKCKKWLNKKEGE 1135          
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Match: UPI00148AB525 (death-associated inhibitor of apoptosis 2-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AB525)

HSP 1 Score: 52.0 bits (123), Expect = 6.340e-5
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:  525 TCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKV 566
            TCKIC+DA VG++FLPC H C CV C      + C ICR ++
Sbjct:   36 TCKICLDAEVGVVFLPCGHLCCCVMCAPAV--RQCPICRAEI 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5964.16530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5J8V2_9PHAE2.100e-24485.37RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX18_ECTSI2.180e-20283.92KH domain containing protein n=1 Tax=Ectocarpus si... [more]
D7FX21_ECTSI3.530e-10048.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKP4_9PHAE5.180e-5837.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JGK6_9PHAE2.380e-1369.23WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
UPI00148AB5256.340e-552.38death-associated inhibitor of apoptosis 2-like n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..84
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 524..568
e-value: 8.5E-9
score: 35.1
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 83..570
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 236..291
score: 10.693
IPR004087K Homology domainSMARTSM00322kh_6coord: 235..306
e-value: 1.8E-4
score: 30.9
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 411..466
e-value: 2.8E-7
score: 32.5
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 409..464
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 508..573
e-value: 2.6E-11
score: 44.8
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 413..463
e-value: 7.1E-5
score: 23.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 226..304
e-value: 7.9E-10
score: 40.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 234..291
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 239..291
e-value: 3.2E-8
score: 33.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 526..563
score: 8.845

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5964contigEcto-sp13_S_contig5964:2362..8510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5964.16530.1mRNA_Ecto-sp13_S_contig5964.16530.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5964 2318..8552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5964.16530.1 ID=prot_Ecto-sp13_S_contig5964.16530.1|Name=mRNA_Ecto-sp13_S_contig5964.16530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=578bp
MQEAVAREEAAVRRKEAAAAAARSKAEAAAGEAARIAEAKAATEASRAMA
AAAELEASEAAKRKAKEEEEEEEERKAKKDAAATAAPPGAKRQEHIVAPV
PERGTSEERVAAGLSGATAGPPAMTGGGSGGGGGGASLVVDMSLEVRLKK
AIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRL
LQANQPPNPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQ
VIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQATGRRLVEDF
YRSKGIEPTLLQPTSSAIAAAAAAGRPGGVVSRARLPDPMMPTEAMIGHL
GRGRTMTGAGPAAAAAGMRAPSGAIPQGARQVAQPVAQPVMYGGGHGGGG
GGGVDVSGGELPQLLRAARCEHHLERFQRDQLDGEVLLEMERRDFDRMGV
TEAEQSRILSALKHAGEGGGGGGGPGAAGRPETSAQRVVTVVRGTSGGVA
TPVEVGDDDDDDDDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRC
GSGFVGKPCIICRQKVTRAQPVIRLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR013761SAM/pointed_sf
IPR013083Znf_RING/FYVE/PHD
IPR001660SAM
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR001841Znf_RING