prot_Ecto-sp13_S_contig5963.16526.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5963.16526.1
Unique Nameprot_Ecto-sp13_S_contig5963.16526.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length295
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5963.16526.1 vs. uniprot
Match: D7FXU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU3_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 1.370e-165
Identity = 246/271 (90.77%), Postives = 251/271 (92.62%), Query Frame = 0 
Query:    1 VALLLEIVTHFVVWKGKLWFRCSLFAGGKGEENPPRGGGSEASAPGYPSGGSHRGLLEHAKNTGGGKXXXXXAPNHGVGNGRQKLLSPHTQEGTMYPSGNYNYNDNEYY-EEGEDTECSRCSIWACFGWNGEDQGKRFFSVPPSARVGWWRTVDLVLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVFDGNNTGHADGGNLTAGDDADNLQ 270
            VALLLEIVTHFVVWKGKLWFRCSLFA GKGEE P  GGGSEASAPGYPSGGSHRGLL HA +TGG K     APNHGVG+G QKLLSPHTQEGTMYPSGNYNYNDNEY  EE EDT CSRCS+WACFGWNGEDQGKRFFSVPPSA+VGWWRTVDLVLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVFDGNN GHADGGNLTAGDD D L+
Sbjct:  518 VALLLEIVTHFVVWKGKLWFRCSLFAVGKGEETPSPGGGSEASAPGYPSGGSHRGLLGHANDTGGVKAEMPGAPNHGVGDGGQKLLSPHTQEGTMYPSGNYNYNDNEYXXEEEEDTACSRCSVWACFGWNGEDQGKRFFSVPPSAKVGWWRTVDLVLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVFDGNNMGHADGGNLTAGDDTDKLE 788
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5963.16526.1 vs. uniprot
Match: A0A6H5KBW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW2_9PHAE)

HSP 1 Score: 490 bits (1261), Expect = 5.380e-162
Identity = 241/270 (89.26%), Postives = 246/270 (91.11%), Query Frame = 0 
Query:    1 VALLLEIVTHFVVWKGKLWFRCSLFAGGKGEENPPRGGGSEASAPGYPSGGSHRGLLEHAKNTGGGKXXXXXAPNHGVGNGRQKLLSPHTQEGTMYPSGNYNYNDNEYYEEG-EDTECSRCSIWACFGWNGEDQGKRFFSVPPSARVGWWRTVDLVLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVFDGNNTGHADGGNLTAGDDADNL 269
            VA LLEIVTHFVVWKGKLWFRCSLFA GKGEE+PP GG SEASAPGYPSGGSHRGLLEHA N+GGG      APNHGVG+G QKLLSPHTQEGTMYPSGNYNYNDNEY     EDTECSRCSIWACFGWNGEDQGKRFFSVPPSAR GWWRTVDL+LVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAV +GNN GHADGGN  AGDD D L
Sbjct:  508 VAFLLEIVTHFVVWKGKLWFRCSLFAAGKGEEHPPPGGVSEASAPGYPSGGSHRGLLEHASNSGGGTAEMPGAPNHGVGDGAQKLLSPHTQEGTMYPSGNYNYNDNEYXXXXXEDTECSRCSIWACFGWNGEDQGKRFFSVPPSARRGWWRTVDLMLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFPPAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVLNGNNMGHADGGNPAAGDDTDKL 777
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5963.16526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXU3_ECTSI1.370e-16590.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBW2_9PHAE5.380e-16289.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5963contigEcto-sp13_S_contig5963:4136..8081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5963.16526.1mRNA_Ecto-sp13_S_contig5963.16526.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5963 4134..8081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5963.16526.1 ID=prot_Ecto-sp13_S_contig5963.16526.1|Name=mRNA_Ecto-sp13_S_contig5963.16526.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
VALLLEIVTHFVVWKGKLWFRCSLFAGGKGEENPPRGGGSEASAPGYPSG
GSHRGLLEHAKNTGGGKAEMPGAPNHGVGNGRQKLLSPHTQEGTMYPSGN
YNYNDNEYYEEGEDTECSRCSIWACFGWNGEDQGKRFFSVPPSARVGWWR
TVDLVLVLVVAGESIVSMATYLAEGDYRVVHALQGLVILRWFPLMFCPFP
PAEGHDDLHDVGGATVHHDPLSHNAREETLKETLALLRGQTKLTAVFDGN
NTGHADGGNLTAGDDADNLQQQQQGSAAMMRTTAASAEEEKGGGG
back to top