prot_Ecto-sp13_S_contig596.16518.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig596.16518.1
Unique Nameprot_Ecto-sp13_S_contig596.16518.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length324
Homology
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BLAST of mRNA_Ecto-sp13_S_contig596.16518.1 vs. uniprot
Match: A0A6H5KKX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX4_9PHAE)

HSP 1 Score: 625 bits (1612), Expect = 4.000e-218
Identity = 308/324 (95.06%), Postives = 313/324 (96.60%), Query Frame = 0 
Query:    1 MSFPGPEAEEQTLHTFFGKHIPGGETSKLRPACTFVQQFIAQELCGTIANDPTFDELWMHFQGILGGIFGKQDATKGPETGPTSRICGSTTFENSWMFATTSFYSLSGLSDALKPTRAGGSSSSNSNSRRRNRQGDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLLEPHKVWYSFTCTSPPMPPHTLAFLRHEGLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQEVPGGGLVGGGAAAEVVRAAPDLNLSALELYLFSFAWYALSSYEDFYHGLEGPGRLTVPHRTHHSMEPAFRQERVALGWRRWVCVG 324
            MSFP PEAEEQTLHTFFG+HIPGGETSKLRPACTFVQQFIAQELCGTIANDPTFDELWMHFQ ILGGIFGKQDATKGPE+G TSRICGSTTFENSWMFATTSFYS+SGLSDALKPTRAGGSSS NSNSRRRNR GDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLLEP KVWYSFTCTSPPMPPHTLAFLRHEGLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQEVPGG LVGGGAAAEVVRAAPDL LSALELYLFSFAWYALSSYEDFYHGLEGPGRL+VPHRTHHSMEPAFRQERVALGWRR   +G
Sbjct:    1 MSFPDPEAEEQTLHTFFGEHIPGGETSKLRPACTFVQQFIAQELCGTIANDPTFDELWMHFQAILGGIFGKQDATKGPESGVTSRICGSTTFENSWMFATTSFYSVSGLSDALKPTRAGGSSSRNSNSRRRNRPGDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLLEPQKVWYSFTCTSPPMPPHTLAFLRHEGLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQEVPGGDLVGGGAAAEVVRAAPDLKLSALELYLFSFAWYALSSYEDFYHGLEGPGRLSVPHRTHHSMEPAFRQERVALGWRRHGVIG 324
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BLAST of mRNA_Ecto-sp13_S_contig596.16518.1 vs. uniprot
Match: D7FGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU8_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 6.210e-118
Identity = 201/267 (75.28%), Postives = 205/267 (76.78%), Query Frame = 0 
Query:   59 MHFQGILGGIFGKQDATKGPETGPTSRICGSTTFENSWMFATTSFYSLSGLSDALKPTRAGGSSSSNSNSRRRNRQGDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLLEPHKVWYSFTCTSPPMPPHTLAFLRHEGLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQE-VPGGGLVGGGAAAEVVRAAPDLNLSALELYLFSFAWYALSSYEDFYHGLEGPGRLTVPHRTHHSMEPAFRQERVALGWRRWVCVG 324
            MHF+ ILGGIFGKQDATKGPE+GPTSRICGSTTFENSWMFATTSFY LSGLSDALKPTRAGGSSSSNSN RRRNR GDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLL                                                  LFPQGRMPHHAVRFQE VPGG LVGGGAAAEVVRAAPDL LS LELYLF FAWYALSSYEDFYHGLEGPGRLTVP+RTHHSMEPAFRQERVALGWRR   +G
Sbjct:    1 MHFKAILGGIFGKQDATKGPESGPTSRICGSTTFENSWMFATTSFYRLSGLSDALKPTRAGGSSSSNSNGRRRNRPGDPRLCGMEPMAVSLLSLLLARPPESSPPDTKNLFSVLL--------------------------------------------------LFPQGRMPHHAVRFQEEVPGGDLVGGGAAAEVVRAAPDLELSTLELYLFHFAWYALSSYEDFYHGLEGPGRLTVPYRTHHSMEPAFRQERVALGWRRHGVIG 217
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig596.16518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKX4_9PHAE4.000e-21895.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGU8_ECTSI6.210e-11875.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig596contigEcto-sp13_S_contig596:604..5599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig596.16518.1mRNA_Ecto-sp13_S_contig596.16518.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig596 604..5599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig596.16518.1 ID=prot_Ecto-sp13_S_contig596.16518.1|Name=mRNA_Ecto-sp13_S_contig596.16518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MSFPGPEAEEQTLHTFFGKHIPGGETSKLRPACTFVQQFIAQELCGTIAN
DPTFDELWMHFQGILGGIFGKQDATKGPETGPTSRICGSTTFENSWMFAT
TSFYSLSGLSDALKPTRAGGSSSSNSNSRRRNRQGDPRLCGMEPMAVSLL
SLLLARPPESSPPDTKNLFSVLLEPHKVWYSFTCTSPPMPPHTLAFLRHE
GLPGLVLFENSRLYTHCLSSPPSLFPQGRMPHHAVRFQEVPGGGLVGGGA
AAEVVRAAPDLNLSALELYLFSFAWYALSSYEDFYHGLEGPGRLTVPHRT
HHSMEPAFRQERVALGWRRWVCVG
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