prot_Ecto-sp13_S_contig5924.16458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5924.16458.1
Unique Nameprot_Ecto-sp13_S_contig5924.16458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length334
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5924.16458.1 vs. uniprot
Match: A0A6H5KYE5_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 5.010e-39
Identity = 178/205 (86.83%), Postives = 182/205 (88.78%), Query Frame = 0 
Query:  130 RSKKSSEGGRAKSPANGKGAXXXXXXXXXXXXXXXXXXXXXXAA-VGSRGETVGKGANSTHSERXXXXXXXXXXDRTKESGSAKDGTNKGNKSAEVSRDRGSGSPRGSSKSGTSNKAVKKASDTKPAAKTRRDSRKTTKGKAGEDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEKKGGSGKGSRRKS 333
            RSKKSSEGGRAKS AN KGA  XXXXXXXXXXXXXXXXXXXXAA VGSR ETVGKGA STHSER  XXXXXXXXDRTKESGS KDGTN+GNKSAEVSRDRGSGSPRGSSKSGTS KAVKKASDTKPAAKT  DS+KTTKGK  ED++    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KKGGSGK SRRKS
Sbjct: 1052 RSKKSSEGGRAKSQANRKGAAAXXXXXXXXXXXXXXXXXXXXAAAVGSRDETVGKGAKSTHSERAKXXXXXXXXDRTKESGSGKDGTNQGNKSAEVSRDRGSGSPRGSSKSGTSKKAVKKASDTKPAAKTGWDSKKTTKGKTSEDDKGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGGSGKSSRRKS 1256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5924.16458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYE5_9PHAE5.010e-3986.83FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5924contigEcto-sp13_S_contig5924:6842..8197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5924.16458.1mRNA_Ecto-sp13_S_contig5924.16458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5924 6541..8415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5924.16458.1 ID=prot_Ecto-sp13_S_contig5924.16458.1|Name=mRNA_Ecto-sp13_S_contig5924.16458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp
MGGRKRNRSEASLASRSRSRERGSKNRRHGKRESSKERRGTRTRSVSRSR
ERKDNKAAKDRAGGWSSREGARRREKTRSRSRSPSNSREGPSGTTRKTSD
RGRRDAKRAASRSRSRSRTRRDSSTERPSRSKKSSEGGRAKSPANGKGAA
AKEKAEGGRGESRTSKEASSAAAVGSRGETVGKGANSTHSERAKSTHGEG
AKDRTKESGSAKDGTNKGNKSAEVSRDRGSGSPRGSSKSGTSNKAVKKAS
DTKPAAKTRRDSRKTTKGKAGEDEQGSRSSLERESSKTRESGRHRRSRSR
SPSGKRTERRRKARSPSREEKKGGSGKGSRRKS*
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