prot_Ecto-sp13_S_contig59094.16436.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59094.16436.1
Unique Nameprot_Ecto-sp13_S_contig59094.16436.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: D8LQC0_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC0_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 2.040e-52
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKH 89
            +GYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKH
Sbjct:  451 LGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKH 539          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A7S0SGT6_9CHLO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGT6_9CHLO)

HSP 1 Score: 151 bits (382), Expect = 2.480e-44
Identity = 71/88 (80.68%), Postives = 80/88 (90.91%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNK 88
            +GY+PVEVDPEDM+ +A E+P  MAAYSVSDAV+TYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCEALLMVEA+RGNIVCPNK
Sbjct:   43 LGYNPVEVDPEDMLPFAQEQPHTMAAYSVSDAVSTYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEALLMVEAFRGNIVCPNK 130          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A7S2FZE0_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZE0_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.950e-43
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVEVDPEDMVR+A E+P  MA+YSVSDAVATYYLY  YVH F+F+L TIIPMGP+DVL KGSGTLCEALLM+EA R N++CPNK V
Sbjct:  133 LGYDPVEVDPEDMVRFAKEQPEHMASYSVSDAVATYYLYSLYVHDFIFALTTIIPMGPEDVLNKGSGTLCEALLMIEACRCNVICPNKQV 222          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A7S2UHD4_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHD4_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.280e-43
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVEVDPEDM+RYA ERP  MA+YSVSDAVATYYLY+ YVHMF+FSL TIIPMGP+DVLRKGSGTLCEALLMV+A   +I+CPNK +
Sbjct:  233 LGYDPVEVDPEDMLRYAKERPVHMASYSVSDAVATYYLYEKYVHMFIFSLATIIPMGPEDVLRKGSGTLCEALLMVQACTKDIICPNKQL 322          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: B8BW81_THAPS (DNA polymerase epsilon catalytic subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW81_THAPS)

HSP 1 Score: 158 bits (400), Expect = 4.120e-43
Identity = 74/90 (82.22%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVEVDPEDMVRYA +RP+ MA+YSVSDAVATYYLY  YVHMF+FSLCTIIPMGP+DVLRKGSGTLCEALLMVEA   +I+CPNK V
Sbjct:  340 LGYDPVEVDPEDMVRYARDRPSHMASYSVSDAVATYYLYDKYVHMFIFSLCTIIPMGPEDVLRKGSGTLCEALLMVEACTKSIICPNKQV 429          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A812Q0Y1_9DINO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0Y1_9DINO)

HSP 1 Score: 157 bits (396), Expect = 1.410e-42
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVE+DPEDM+R A+E+P  MA+YSVSDAVATYYLY  YVH FVFSLCTIIPM PDDVLRKGSGTLCE LLMVEA+RGNIVCPNK V
Sbjct:  425 LGYDPVEIDPEDMLRLAAEQPLHMASYSVSDAVATYYLYMKYVHNFVFSLCTIIPMQPDDVLRKGSGTLCEMLLMVEAHRGNIVCPNKQV 514          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A7S4W861_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W861_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.410e-42
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVEVDPEDMVR+A E+P  MA YSVSDAVAT+YLY+ YVHMF+FSL TIIPM P+DVLRKGSGTLCE LLMV+A +  I+CPNK V
Sbjct:   40 LGYDPVEVDPEDMVRFAMEKPAYMAQYSVSDAVATFYLYEKYVHMFIFSLATIIPMNPEDVLRKGSGTLCETLLMVQATQKAIICPNKQV 129          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: A0A1R3JS58_COCAP (DNA polymerase epsilon catalytic subunit n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3JS58_COCAP)

HSP 1 Score: 149 bits (376), Expect = 1.510e-42
Identity = 67/89 (75.28%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKH 89
            +GYDP+EV+PEDMVR+A E+P  MA+YSVSDAVATYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCE LLMV+AY+ N++CP+KH
Sbjct:  204 LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMWPDEVLRKGSGTLCEMLLMVQAYKANVICPSKH 292          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.630e-42
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV 90
            +GYDPVEVDPEDMVR+A ER TEMA+YSVSDAVATYYLY TYVH F+FSL TIIPM  +DVLRKGSGTLCE LLMVEA+RGNIVCPNK V
Sbjct:  444 LGYDPVEVDPEDMVRFAHERATEMASYSVSDAVATYYLYTTYVHNFIFSLSTIIPMKAEDVLRKGSGTLCETLLMVEAFRGNIVCPNKQV 533          
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Match: UPI000B8D0A56 (LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D0A56)

HSP 1 Score: 154 bits (390), Expect = 9.200e-42
Identity = 71/89 (79.78%), Postives = 81/89 (91.01%), Query Frame = 0
Query:    1 IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKH 89
            +GYDP+EV+PEDMVR+A E+P  MA+YSVSDAVATYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCE LLMV+AYRGNI+CPNKH
Sbjct:  405 LGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMCPDEVLRKGSGTLCEMLLMVQAYRGNIICPNKH 493          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59094.16436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQC0_ECTSI2.040e-5298.88DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A7S0SGT6_9CHLO2.480e-4480.68DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S2FZE0_9STRA1.950e-4376.67DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S2UHD4_9STRA3.280e-4378.89DNA polymerase epsilon catalytic subunit (Fragment... [more]
B8BW81_THAPS4.120e-4382.22DNA polymerase epsilon catalytic subunit n=1 Tax=T... [more]
A0A812Q0Y1_9DINO1.410e-4282.22DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S4W861_9STRA1.410e-4275.56DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A1R3JS58_COCAP1.510e-4275.28DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
W7TVX1_9STRA3.630e-4283.33DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
UPI000B8D0A569.200e-4279.78LOW QUALITY PROTEIN: DNA polymerase epsilon cataly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.342.10coord: 65..82
e-value: 1.2E-8
score: 36.3
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..89
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 7..64
e-value: 1.2E-8
score: 36.3
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..89
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59094contigEcto-sp13_S_contig59094:12..696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59094.16436.1mRNA_Ecto-sp13_S_contig59094.16436.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59094 12..696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59094.16436.1 ID=prot_Ecto-sp13_S_contig59094.16436.1|Name=mRNA_Ecto-sp13_S_contig59094.16436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
IGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSL
CTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR029703POL2
IPR012337RNaseH-like_sf