prot_Ecto-sp13_S_contig5894.16412.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5894.16412.1
Unique Nameprot_Ecto-sp13_S_contig5894.16412.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length481
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5894.16412.1 vs. uniprot
Match: D8LB29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB29_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 1.360e-119
Identity = 427/481 (88.77%), Postives = 431/481 (89.60%), Query Frame = 0 
Query:    1 MSGAAIPQLRLGAGIAASPQQLEDSVAAHAQRRTRSSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPDVDVAGIDKGMAAAVXXXXXXXXXXXXXXXAAGVEGRSCVDPASAGRERDFSVPEVLDLIDQHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM-WQPLPSRGHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRGARPDRQERLRDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR 480
            MSGAAIPQLRLGAG+AAS QQLEDSVAAH QRR RSSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPD+DVAGIDKGMAAAV XXXXXXXXXXXXXX  GV GR  VDPA+AG+ERDFSVPEVLDLIDQHEXXXXXX                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  WQPLPSRGH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T RG RPDRQERL DEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR
Sbjct:  523 MSGAAIPQLRLGAGMAASQQQLEDSVAAHPQRRARSSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPDIDVAGIDKGMAAAVAXXXXXXXXXXXXXXXXGVGGRRNVDPATAGKERDFSVPEVLDLIDQHEXXXXXXKAGKPSLERQLTPEQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQPLPSRGHX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATEPVWWEHDDRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGRGGRPDRQERLNDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR 1001
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BLAST of mRNA_Ecto-sp13_S_contig5894.16412.1 vs. uniprot
Match: A0A6H5KM86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM86_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.770e-94
Identity = 366/459 (79.74%), Postives = 370/459 (80.61%), Query Frame = 0 
Query:   29 HAQRRTRSSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPDVDVAGIDKGMAAAVXXXXXXXXXXXXXXXAAGVEGRSCVDPASAGRERDFSVPEVLDLIDQHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMWQPLPSRGHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-------TVRGARPDRQERLRDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR 480
            H   +  SSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPD+DVAGID GMAAAVXXXXXXXXXXXXXXXA GV GR  VDPA+AGRER+FSVPEVLDLIDQHE  XX                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         VRG RPDRQERLRDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR
Sbjct:    2 HRGEKGGSSKLTVYPVPDKPVSLDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHLRVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPDIDVAGIDNGMAAAVXXXXXXXXXXXXXXXATGVGGRRKVDPATAGRERNFSVPEVLDLIDQHEEEXXEDKAGKPSLERQLTPEQRQRQLNLAPPPSRQPGRVPKTARGLVAAGGGSGDLKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVRGGRPDRQERLRDEVALGWLWKSEVRDWLSAMSEAGFAYDTLAVLEVVR 460
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5894.16412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB29_ECTSI1.360e-11988.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM86_9PHAE2.770e-9479.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5894contigEcto-sp13_S_contig5894:743..3715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5894.16412.1mRNA_Ecto-sp13_S_contig5894.16412.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5894 629..3715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5894.16412.1 ID=prot_Ecto-sp13_S_contig5894.16412.1|Name=mRNA_Ecto-sp13_S_contig5894.16412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=481bp
MSGAAIPQLRLGAGIAASPQQLEDSVAAHAQRRTRSSKLTVYPVPDKPVS
LDVVHWRRIRRKETRCSYGRPQPRTNVQRCYGPELTEHLTRSYVLRGYHL
RVLVAHNAEVCLRAGLEAMAHTWRMLGILLSGVPGGLLLPLGSSAPDVDV
AGIDKGMAAAVATATAAAGGGSGGGGAAGVEGRSCVDPASAGRERDFSVP
EVLDLIDQHEEEEEDKAGKSSLERRLTPEQRQQQLNLAPPPPRQPGRPAT
TARGLVAAGGGSGDLKLPPRRPAAAAHPTVAIASTTSPAAAATTSSESVS
SSSRHGTRSQNSATFGGGGGPPMWQPLPSRGHLPPSSAGAAAVAYTATTA
DDEEDDGGGGDGGDSDGYTTATISFAATESVWWEHDDRANRGGGGRVSSQ
AAAAAARAARARAGEGATRNGGGGGGGGVTVRGARPDRQERLRDEVALGW
LWKSEVRDWLSAMSEAGFAYDTLAVLEVVR*
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