mRNA_Ecto-sp13_S_contig589.16406.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A6H5KEF5_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEF5_9PHAE) HSP 1 Score: 975 bits (2520), Expect = 0.000e+0 Identity = 465/492 (94.51%), Postives = 478/492 (97.15%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKVTFVPPSLVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKALEKFRSLYYTYSFHHQDNP 1503
QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEA PKACAKVYPTQVAQG+IWVWAENGPDAGLESALTPPHLIPELDD+EG+ASGRVVPQGVQHTDLAYGWDTM+ENFVDPAHVPSAHHGVAGDRYKDVRPIDL+PDEEWPVTATSGFRFKFDDE+ THNK+TFVPP LVLVENAD SGTLKLMLY IPTKPGWSRLVGRQAYVHKYAPKSKEA+ALHK+NKRLGKKTSGLLVAARITSKFPQWL+HATSGLFLYQDMVFLHHQEKTLASVGYDGT +SSY AVY PAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPERE REVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVV FTWGLLRGARAVSTPAAVGSRSAGVINA+TARAMLPAVAL +ASLGAVKALEKFRSLYYTYSFHHQDNP
Sbjct: 73 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEANPKACAKVYPTQVAQGIIWVWAENGPDAGLESALTPPHLIPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENFVDPAHVPSAHHGVAGDRYKDVRPIDLEPDEEWPVTATSGFRFKFDDEVAGTHNKITFVPPCLVLVENADNSGTLKLMLYGIPTKPGWSRLVGRQAYVHKYAPKSKEAKALHKKNKRLGKKTSGLLVAARITSKFPQWLIHATSGLFLYQDMVFLHHQEKTLASVGYDGTRSSSYGRAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREQNREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVFFTWGLLRGARAVSTPAAVGSRSAGVINAVTARAMLPAVALMLASLGAVKALEKFRSLYYTYSFHHQDNP 564
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: D8LGA1_ECTSI (Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA1_ECTSI) HSP 1 Score: 878 bits (2268), Expect = 0.000e+0 Identity = 420/501 (83.83%), Postives = 445/501 (88.82%), Query Frame = 1
Query: 1 MFAPATMFVQWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKVTFVPPSLVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKALEKFRSLYYTYSFHHQDNP 1503
MF PATMFVQWYP+L HVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQ +IWVWAENGPDAGLESALTPPHL+PELDD+EG+ASGRVVPQGVQHTDLAYGWDTM+EN VDP+HVP AHHGVAGDRYKDVRPIDL+PD+EWPVTAT VLVENAD +G LK+ LY +PTKPGW RLVGRQAYVHKYAPKSKEA+AL KENKRLGKK S L+VAA I SK PQWLMHA++G+FLYQDMV LHHQ+KTLASVG+DG S SSY AVY PAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKN+N+LLAASKTAT VS TWGLLRGARAVSTP AVGSRSA V+NA+TARA+LPAVALT+ASLGAVK LEK R LYYTYSFHHQDNP
Sbjct: 1 MFVPATMFVQWYPVLGVKHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQDIIWVWAENGPDAGLESALTPPHLLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHGVAGDRYKDVRPIDLEPDKEWPVTAT-------------------------VLVENADDAGELKMTLYGVPTKPGWCRLVGRQAYVHKYAPKSKEAKALRKENKRLGKKPSELMVAASIMSKIPQWLMHASAGIFLYQDMVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNINKLLAASKTATAVSCTWGLLRGARAVSTPTAVGSRSASVVNAVTARAILPAVALTLASLGAVKVLEKLRGLYYTYSFHHQDNP 476
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A6H5JY02_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY02_9PHAE) HSP 1 Score: 705 bits (1819), Expect = 3.910e-247 Identity = 337/492 (68.50%), Postives = 384/492 (78.05%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKVTFVPPSLVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKALEKFRSLYYTYSFHHQDNP 1503
QWYP+L+ DPGRAHPVQLLGK LVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAK VAQGM+WVW ENGPDAGLESALTP LIP+LDDKEGI SGRV+ V DLAYGWDT MEN VDP+HV +HHGVAGDRY PIDL+P WPV GF F+F D+ + + VTF PP LV+ E D +G L L+LY IPT+PGW RL+GR AYVH +AP SK+A+ KE+KR G K S L A + +K P WL H T LFL+QD+VFLHHQEK LAS GYD S+Y AV++PA ADRAV+A+R+WI HGSGGPAWDK+CD TLP RE RE LF+ YE HTK+C++C ALKNV ++L +KTA V+SFTW +LRGARAV T AA GS SA VIN +TARAMLPAVALT AS+GA+K LEK R ++YTYSFHHQD+P
Sbjct: 99 QWYPVLSLKDTDPGRAHPVQLLGKELVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAK-----VAQGMVWVWGENGPDAGLESALTPAQLIPDLDDKEGIESGRVMLARVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVSSDSTVTFQPPCLVINEAKDSAGKLLLILYGIPTRPGWVRLLGRSAYVHTFAPNSKKAKEQAKEDKRNGVKKSRLQATANVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGYDS---SNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREDLFNVYENHTKSCTSCQGALKNVKKMLTTAKTAAVISFTWAVLRGARAVGTAAAAGSPSARVINTVTARAMLPAVALTFASVGAIKILEKLRGMFYTYSFHHQDSP 582
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 1.340e-159 Identity = 252/505 (49.90%), Postives = 324/505 (64.16%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNK---VTFVPPSLVLVENADYSG-TLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHK--ENKRLGKKTSGLLVAARIT--------SKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKALEKFRSLYYTYSFHHQDN 1500
QWYP+L+ DPG+AH VQLLGK+LVVWRN EGRWS FDDRCPHRAAPL+EGR+E DGSLLCAYHAWRFD DGKCLSIPQSDRGGKDE P+ACAK+YPTQVAQ M+WVW +NGPDA L+S LT P L+ L+DK+GI SGRVVP V DLAY W+T EN +DPAHV +HHG+ G R +P+DL E P A + F D+ K TFVPP+LV + G T+ L+ Y IPT+PGWSR+ RQ + + E +K +NK + S L + ARI+ ++ W+ H S +F++QDM L+HQEK +AS G+ G + +SD +Y P +D+ + +RKWI GSGGP W K D +LP R +V++D YE HTK C+ CL ALK V + + A+K +TV S TW +LR A A+ST + + S N + A+AMLP V L +ASL K L R ++Y Y + HQ++
Sbjct: 74 QWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDGSLLCAYHAWRFDTDGKCLSIPQSDRGGKDETNPRACAKLYPTQVAQDMVWVWGKNGPDAVLDSVLTKPALVSALEDKKGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSM-AKPLDL---EATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELEDGKTISLVQYNIPTRPGWSRMFNRQLTI------TPEVVGENKGDDNKDKKRAPSLLQLVARISPVKLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTG---AKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTACLGALKRVEQCITAAKVSTVASLTWAVLRAASAIST-SILASPGTPPSNFVAAKAMLPGVLLMLASLKTTKMLGSLRRMFYVYKYVHQEH 564
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A2W1JL98_9CYAN (3-ketosteroid-9-alpha-monooxygenase, oxygenase component n=1 Tax=Acaryochloris thomasi RCC1774 TaxID=1764569 RepID=A0A2W1JL98_9CYAN) HSP 1 Score: 382 bits (980), Expect = 3.930e-122 Identity = 214/499 (42.89%), Postives = 281/499 (56.31%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSDRGGKDE---AQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFD---DEITDTHNKVTFVPPSLVLVENADYS--GTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKALEKFRSLYYTYSFHHQDN 1500
QWYPL + +DP + H VQLLGK+LV+WR+ + +W CF+D CPHR PL+EGR+EDDG+LLCAYHAWRFD G C+SIPQS +E A PKACA YPTQ QG++W+WAE+G +A LES + P +IPEL+D SGRV DL YGWD+ +EN +DPAHV +HHG+ G R +D R +++ +E V+A G FK D I T F PP LV + + Y G L LYA PT+PGW R VG Q V A G+ SGL PQWL HA + LF++QD+VFLH+QEK +A + + D VY P P D+A++A RKW+ GG W CDP LP E ++VLFD + HTK C C +ALKN+ R+ + A ++ F G+L ARA+ R+ + M + A+A +I G L+KF L+Y Y F H N
Sbjct: 25 QWYPLAVTELLDPKKPHAVQLLGKDLVLWRDGDKQWHCFEDACPHRLVPLSEGRVEDDGTLLCAYHAWRFDGAGNCVSIPQSKDAATEEKHKANPKACAIAYPTQERQGLLWIWAESGAEAYLESQMREPRIIPELEDD----SGRVKKLFWYVRDLPYGWDSFIENVIDPAHVTVSHHGIMGKR-EDARYVEMSRVKE--VSAQEGLSFKVGPTPDVIAQTVQD--FQPPCLVHI-GSQYKDGGKFILALYASPTRPGWCRQVGCQVLVKNEA----------------GQLPSGL---GFYGLPMPQWLGHALTSLFMHQDLVFLHYQEKIIAR------RSEEWLDQVYTPNPQDKAIIAFRKWLQYKAGGGIPWA--CDPELPPAERDKQVLFDVWSTHTKDCQVCRQALKNIQRVTVVAYVAAIICFGVGILVDARAI--------RATSQLWVMPSVGFWVAIASSILLAGGGYLLQKFSRLFYVYEFEHAHN 478
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A563VJP5_9CYAN (Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VJP5_9CYAN) HSP 1 Score: 380 bits (977), Expect = 1.950e-121 Identity = 206/502 (41.04%), Postives = 277/502 (55.18%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQS---DRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKVT-FVPPS-LVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAV------KALEKFRSLYYTYSFHHQDN 1500
QWYP+ A+ +D R H +QLLGK+LV+W++ G+W CF+D CPHR APL+EGRIE DG+LLCAYHAWRFD DG C+SIPQS + ++ A K+CA VYPTQ QG+IWVWAE+G +A +ES L PP +PELD+++ +++ DL YGWD MEN DPAHV +HHG+ G RY+D + D+ E ++ GF F ++ F PP + + N G L L+LYAIPT+PGW R +GRQ + A GK GL A P+WL H + LFL+QD+VFLHHQEK +A G + + VY P P D+AV+A R+W+A GG WD DC+ L E ++E LFD + HT+ C C ALKN+NRL S + L R V+ A + + + LP + +A +GA+ L+K L+Y Y F H DN
Sbjct: 31 QWYPVAVAEFLDSSRPHSIQLLGKDLVLWQDNSGQWHCFEDSCPHRLAPLSEGRIESDGTLLCAYHAWRFDGDGNCVSIPQSQDKETESRNCANEKSCAVVYPTQELQGLIWVWAESGAEAQVESQLRPPRTVPELDNQDK----KIIKAFWNVRDLPYGWDFFMENVADPAHVSVSHHGIMGSRYEDAKYYDMPRLRE--ISTQEGFAFGVTPTASNIEQAFNDFQPPCHMRIATNYKDGGKLILVLYAIPTRPGWCRHIGRQILIKSDA----------------GKTPPGLGFFAL---PMPKWLGHILASLFLHQDLVFLHHQEKIVAKRGQ-----GKWLEKVYTPNPQDKAVIAFRQWLAKRAGGGVPWDADCNHQLLNTELEKEKLFDVWTTHTQHCQVCQDALKNINRLTVLSYLGAIACLFLALFLDGRYVAMQAVTEPANVSIWHT------LPPLGFGLAIIGAIILATAGYLLKKLSRLFYVYKFSHADN 496
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A8J6SPF2_9CYAN (Rieske 2Fe-2S domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SPF2_9CYAN) HSP 1 Score: 380 bits (976), Expect = 3.020e-121 Identity = 213/502 (42.43%), Postives = 277/502 (55.18%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQS---DRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKV-TFVPPS-LVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPA----VALTIASLGAVKA--LEKFRSLYYTYSFHHQDN 1500
QWYP+ D +DP R H +QLLGK++V+WR+ G+W CF+D CPHR APL+EGR+E DG+LLCAYHAWRFD++G C+SIPQS K + K+CA VYPTQ QG++WVWAE+G +A +ES P +IPEL++ S RVV DL YGWD MEN DPAHVP +HHG+ G RYKD + D+ E ++ GF F V F PP + +V G L L LYA PT+PGW R +G Q +V A GK+ GL V P WL H LFL+QD VFLH+QEK LA G D + DAVY P D+ V+A R+W++ GG WD C+ LP + ++ LFD + HT+ C C ALKN+NRL + A VV F G++ ARAV+ A + +T ++P +AL A L A+ L+KF L+Y Y F H N
Sbjct: 31 QWYPVAVVDFLDPSRPHAIQLLGKDIVLWRDGSGQWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRFDSEGNCVSIPQSIDKQTEAKHCSNKKSCAVVYPTQERQGLLWVWAESGQEAQVESQSRAPRIIPELEED----SDRVVQLFWNVRDLPYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDMPRIRE--MSTQEGFSFAITPTAPTIEQVVHDFQPPCHMRIVSTFKDGGKLILALYASPTRPGWCRHIGGQVFVKNEA----------------GKRPKGLGVFGL---PMPIWLGHVLGSLFLHQDAVFLHYQEKILAKRGKD-----RWLDAVYTPNSQDKMVIAFRQWLSKRAGGGIPWDSGCNSELPSAQRDKQKLFDVWATHTQHCQVCQDALKNINRLSVLAYVAAVVCFGLGVMVDARAVAMKVAAAPIEQTATSVLT---VVPPTGFWLALGSAILFAIVGYLLKKFSRLFYVYEFEHAHN 499
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A846FN29_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FN29_9CYAN) HSP 1 Score: 377 bits (967), Expect = 9.070e-120 Identity = 207/501 (41.32%), Postives = 272/501 (54.29%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQS---DRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKV-TFVPPS-LVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLP-----AVALTIASLGAVKALEKFRSLYYTYSFHHQDN 1500
QWYP+ D +DP R H +QLLG++LV+WR+ G W CF+D CPHR APL+EGR+E DG+L+CAYHAWRF ADGKC++IPQS K+ + K+ A VYPTQ QG++WVW E+G A LES L P +IPEL+D SGR V DL YGWD MEN DPAHVP +HHG+ G+RY+D D+ P ++ ++ GF F + V F PP + + N G L LYA PT+PGW R +G Q V A GK GL A P WL H S LFL+QD+VFLH+QEK LA + + AVY P P D+ ++ +R+W+ GG AW C LP E ++ LFD + HT+ C C +ALKN+NR+ + A + G++ ARA++ AA+ S V + P A+A TI G L+KF L+Y Y F H N
Sbjct: 39 QWYPIAVVDFLDPARPHAIQLLGQDLVLWRDGAGIWRCFEDFCPHRLAPLSEGRVESDGTLMCAYHAWRFGADGKCVNIPQSKDPQTEAKNCSNHKSAAVVYPTQERQGLLWVWPESGSQAALESQLQTPRIIPELEDN----SGRTVKLYWYVRDLPYGWDFFMENVADPAHVPVSHHGIIGNRYRDANYYDMIPVKQ--ISTQEGFSFAITPAGENIEQAVHDFQPPCHMRIASNFKDGGKFILALYASPTRPGWCRQIGCQVLVKNEA----------------GKTPPGL---AFFGLPMPTWLGHVLSSLFLHQDLVFLHYQEKILAK-----RNQGEWLKAVYTPNPQDKMIITLRQWLKYRAGGGIAWASGCSSELPMAERDKQKLFDVWSTHTQDCRVCQQALKNINRVKILAYVAAIACLCLGVVVDARAIAVQAALMSADQTVTSLSFLTVAPPVEFWGAIAGTILFAGVGYLLQKFSRLFYVYEFEHAHN 509
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: Q3MEA6_TRIV2 (Rieske (2Fe-2S) region n=6 Tax=Nostocaceae TaxID=1162 RepID=Q3MEA6_TRIV2) HSP 1 Score: 376 bits (966), Expect = 9.080e-120 Identity = 208/506 (41.11%), Postives = 280/506 (55.34%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQSD---RGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDDEITDTHNKVT-----FVPPS-LVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAMLPAVALTIASLGAVKA------LEKFRSLYYTYSFHHQDN 1500
QWYPL + +DP R H +QLLGK++V+WR+ +W CF+D CPHR APL+EGR+E DG+LLCAYHAWRFDA G C+SIPQS K+ K+CA VYPTQ QG++WVWAE G A +ES L P ++PEL+D SG+V+ DL YGWD MEN DPAHVP +HHG+ GDRYKD + D+ P P++ GF F EI T K F PP + +V ++ G L L LYA PT+PGW R +G Q +V +N + GKK GL + P WL+H + LFL+QDMVFLH+QEK +A + +AVY P P D+ V+ +R+W+ GG W + +P E ++ LFD + HT+ C+ C ALKN+NRL + + + ++ AR V+ AA+G A + LP V +A GA+ L++F L+Y Y F H N
Sbjct: 37 QWYPLAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAQGNCVSIPQSKDEKTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDN----SGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYKDAKFYDMIPVR--PISTQDGFAF----EIQPTQGKTVQGIHDFQPPCHMRIVSTSEDGGQLILALYATPTRPGWCRHIGCQVFV---------------KNPQ-GKKPQGL---SFFGLPLPVWLVHVLASLFLHQDMVFLHYQEKIIAQ-----KKNGKWLNAVYTPNPQDKMVITLRQWLKNRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDARTVAMQAALG---ASIFT-------LPPVGFWLALGGAILLAVVGYQLKRFSRLFYVYEFEHARN 498
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Match: A0A261KWR2_9CYAN ((2Fe-2S)-binding protein n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0A261KWR2_9CYAN) HSP 1 Score: 376 bits (965), Expect = 1.170e-119 Identity = 207/505 (40.99%), Postives = 282/505 (55.84%), Query Frame = 1
Query: 28 QWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGKCLSIPQS---DRGGKDEAQPKACAKVYPTQVAQGMIWVWAENGPDAGLESALTPPHLIPELDDKEGIASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVAGDRYKDVRPIDLQPDEEWPVTATSGFRFKFDD-EITDTHNKV-TFVPPS-LVLVENADYSGTLKLMLYAIPTKPGWSRLVGRQAYVHKYAPKSKEARALHKENKRLGKKTSGLLVAARITSKFPQWLMHATSGLFLYQDMVFLHHQEKTLASVGYDGTSASSYSDAVYIPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVSFTWGLLRGARAVSTPAAVGSRSAGVINAMTARAML--PAVALTIASLGAVK------ALEKFRSLYYTYSFHHQDN 1500
QWYP+ DH D R +P QLLGKNLV+WRN G+WSCF+D CPHR PL+EGR+E DG+L+CAYHAWRF+++GKC+SIPQS + K+ K+CA VYPTQ QG++WVW E+G A +ES L P ++PEL++ S RVV DL YGWD MEN DPAHVP +HHG G RY + + D+ P ++ ++ GF F+ +I + F PP + +V + G L+LYA+PT+PGW R +G Q V K+ + GK+ GL A P WL H + LF++QD+VFLH+QEK +A+ Y D VY P P D+ V+ RKW+ GG W +C+P LP E+ + LFD +E HTK C C ALKN+NRL + + G++ ARA++ AA G+ +I T+ + L P + A GA L++ L+Y Y F H DN
Sbjct: 25 QWYPVAVIDHTDTSRPYPFQLLGKNLVLWRNNTGKWSCFEDVCPHRLVPLSEGRVESDGTLMCAYHAWRFNSEGKCVSIPQSKDKETEAKNCTNSKSCAVVYPTQERQGLLWVWLESGEKAQVESKLREPRVVPELENP----SDRVVKLFWSTRDLPYGWDLFMENVSDPAHVPVSHHGFMGSRYTEDKYYDMIPVKK--ISTQEGFSFEITPFKIPGIKQAIHDFQPPCHMRIVSELENDGKFILVLYAVPTRPGWCRHIGCQVLV--------------KDEQ--GKRPKGL---AFFGLPMPDWLGHVLASLFVHQDLVFLHYQEKIIAN-----RQEGKYLDLVYTPNPQDKMVITFRKWLEKRAGGGIPWAAECNPELPPPEYDKRKLFDVWETHTKDCRVCQDALKNINRLKILTYVVAGLCLCLGIIIDARAIAIQAATGA----IIETATSVSGLAVPPLGFWFAVGGAALFAFGGYKLQQLSRLFYVYEFEHADN 495 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig589.16406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig589.16406.1 >prot_Ecto-sp13_S_contig589.16406.1 ID=prot_Ecto-sp13_S_contig589.16406.1|Name=mRNA_Ecto-sp13_S_contig589.16406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=502bp MFAPATMFVQWYPLLAADHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDback to top mRNA from alignment at Ecto-sp13_S_contig589:5288..15694- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig589.16406.1 ID=mRNA_Ecto-sp13_S_contig589.16406.1|Name=mRNA_Ecto-sp13_S_contig589.16406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig589:5288..15694- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig589:5288..15694- >mRNA_Ecto-sp13_S_contig589.16406.1 ID=mRNA_Ecto-sp13_S_contig589.16406.1|Name=mRNA_Ecto-sp13_S_contig589.16406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig589:5288..15694- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |