prot_Ecto-sp13_S_contig5862.16358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5862.16358.1
Unique Name	prot_Ecto-sp13_S_contig5862.16358.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	461

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5862.16358.1 vs. uniprot
Match: D7FSS9_ECTSI (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSS9_ECTSI)

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 447/454 (98.46%), Postives = 452/454 (99.56%), Query Frame = 0

Query:    8 GNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSEDGDTEDVDELAEGMIEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVGCLMLHLAAEAGHDTIVHYLVEDLWVDVDEATVRGMTALHYAAKANRTAVVRELSRLGADLEAKNDAGQVPSQLTKDRLLRRLFQQYLGGGGWGGAGSGAGGAMVDRFVSPSASRVVDYVAVMTVKLAPQLRAECDELSDLKQATVAQVCRFPEEDHEDTPMTDASNLAEICTQSCGAQGGPLAAYGTLLTDTSGARSYVWSKVLGVYQDAAQKGRARVHTALGPPPGERDGAVPAGETSARVVLVLARHPYTAAFASICEHIAELILDEALNWGSLCEWPLDMEQERNQQIRFCMEHYASDLPLPLPSVQAEYTVLDRVLRYGDAHASHSSFPHLEEADLRCLTSRLGPDTILVALSCLLQ 461
            GNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSEDGDTEDVDELA+GMIEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVGCLMLHLAAEAGHDTIVHYLVEDLWVDVDEATVRGMTALHYAAKANRTAVVRELSRLGADLEAKNDAGQVP+QLTKDRLLRRLFQQYLGGGGWGGAGSGAGGAMVDRFVSPSASRVVDYVAVMTVKLAPQLRAECDELSDLKQATVAQVCRFPEEDHEDTPMTDASNLAEICTQSCGAQGGPLAAYGTLLTDTSGARSYVWSKVLGVYQDAAQKGRARVHTALGPPPG+RDGAVPAGETSARVVLVLARHPYTAAFASICEHIAELIL EALNWGSLCEWPLDMEQERNQ+IRFCMEHYASDLPLPLPS QAE+TVLDRVLRYGDAHASHSSFPHLEEADLRCLTSRLGPDTILVALSCLLQ
Sbjct:    6 GNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSEDGDTEDVDELAQGMIEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVGCLMLHLAAEAGHDTIVHYLVEDLWVDVDEATVRGMTALHYAAKANRTAVVRELSRLGADLEAKNDAGQVPAQLTKDRLLRRLFQQYLGGGGWGGAGSGAGGAMVDRFVSPSASRVVDYVAVMTVKLAPQLRAECDELSDLKQATVAQVCRFPEEDHEDTPMTDASNLAEICTQSCGAQGGPLAAYGTLLTDTSGARSYVWSKVLGVYQDAAQKGRARVHTALGPPPGDRDGAVPAGETSARVVLVLARHPYTAAFASICEHIAELILSEALNWGSLCEWPLDMEQERNQEIRFCMEHYASDLPLPLPSAQAEHTVLDRVLRYGDAHASHSSFPHLEEADLRCLTSRLGPDTILVALSCLLQ 459

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BLAST of mRNA_Ecto-sp13_S_contig5862.16358.1 vs. uniprot
Match: A0A835YRB3_9STRA (AEX-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB3_9STRA)

HSP 1 Score: 310 bits (793), Expect = 4.240e-91
Identity = 200/483 (41.41%), Postives = 262/483 (54.24%), Query Frame = 0

Query:    8 GNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSEDGDTEDVDELAEGMIEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVGCLMLHLAAEAGHDTIVHYLVEDLWVDVDEATVRGMTALHYAAKANRTAVVRELSRLGADLEAKNDAGQVPSQLTKDRLLRRLFQQYLGGGGWG--------GAGSGAGGAMVDRFVSPSASRVVDYVAVMTVKLAPQLRAECDELSDLKQATVAQVCRFPEEDHEDTPMTDASNLAE-ICTQSCGAQ----------GGPLA--AYGTLLTDTSGARSYVWSKVLGVYQDAAQKGRARVHTALGPPP----GERD---GAVPAGETSARVVLVLARHPYTAAFASICEHIAELILDEALNWGSLCEWPLDMEQERNQQIRFCMEHYASDLPLPLPSVQA-EYTVLDRVLRYGDAHASHSSFPHLEEADLRCLTSRLGPDTILVALSCLLQ 461
            G  + KAYLSI EYLRKAG FKTVNVYY  IISTHPS+  SE GD E +DE+A+ MI+AA  G +E L+FL G+                                  VHYLV DLWVD D  T RGMTA HYAAKANR AV+REL+  GADL  +NDAGQ+P+Q+T DR+++RL +Q   G G G        GAG GAG              V+DY+ VMTV + PQL    + L D     V  +CR P+E+ ED P  D   LA  +    C  Q          GG     A+ T+LTD++GARSY     +GV+ D+A   R    T+LG P        D   G +  G+ +  VV +     Y    A++ +H+A++I DEA  WG L EWPL++++ RN  +   M H A  LP P+ S     +T     L YGD HA+HS+FP++++A L+ L S L P  ++  L+CLLQ
Sbjct:   22 GGRKVKAYLSISEYLRKAGPFKTVNVYYRNIISTHPSLTHSETGDDEAIDEVAQRMIDAAMGGDVELLKFLVGQ----------------------------------VHYLVSDLWVDCDACTTRGMTAAHYAAKANRVAVLRELATAGADLMLENDAGQLPAQMTADRMVQRLLEQLGAGTGIGRRIRDFAAGAGRGAG------------RPVIDYLCVMTVVMMPQLSPSGELLGD-GVPRVLGMCRCPQEEREDAPFPDVDALAHMVVVDMCHRQEEQAREETAHGGEKQWRAFSTILTDSAGARSYATCCTVGVFVDSATMRRQATATSLGAPQQGTASNADTNLGGLAVGQAACAVVAITQGAFYPDTSAAVVKHLAQIIDDEAHYWGGLREWPLNLDEPRNATLASAMSHLALSLPPPVVSCACVSHTHEGLTLTYGDVHAAHSAFPYVDDACLKVLLSCLSPMNVVTVLACLLQ 457

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BLAST of mRNA_Ecto-sp13_S_contig5862.16358.1 vs. uniprot
Match: W5KSN4_ASTMX (Ankyrin repeat domain 16 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=W5KSN4_ASTMX)

HSP 1 Score: 60.8 bits (146), Expect = 2.050e-6
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 0

Query:   64 IEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVGCLMLHLAAEAGHDTIVHYLVEDLWVDVDE-ATVRGMTALHYAAKANRTAVVRELSRLGADLEAKNDAGQ 168
            ++A ++GHL   + L  K Q         T + + +G   LH A+    +  +H+LV+DL +DV+  AT   +TALHYAAK   T+ ++ L +LGADL A++  G+
Sbjct:  217 MDAVRNGHLAVAKLLLEKHQASP------TAV-DILGAQPLHQASVTAQEEALHFLVQDLNIDVNAGATKLELTALHYAAKEGHTSAIKTLLQLGADLHARDKKGR 315

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5862.16358.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5862.16358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FSS9_ECTSI	0.000e+0	98.46	UDENN domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A835YRB3_9STRA	4.240e-91	41.41	AEX-3 domain-containing protein n=1 Tax=Tribonema ...	[more]
W5KSN4_ASTMX	2.050e-6	35.85	Ankyrin repeat domain 16 n=2 Tax=Astyanax mexicanu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 99..129 e-value: 7.2 score: 15.6 coord: 133..162 e-value: 0.0012 score: 28.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 133..165 score: 12.529
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 64..164 e-value: 2.7E-11 score: 43.9
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 99..170 score: 16.175
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 45..187 e-value: 3.1E-18 score: 67.8
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 64..173
None	No IPR available	PANTHER	PTHR24134:SF3	ANKYRIN REPEAT FAMILY PROTEIN	coord: 100..183
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 100..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5862	contig	Ecto-sp13_S_contig5862:735..7973 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5862.16358.1	mRNA_Ecto-sp13_S_contig5862.16358.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5862 735..7973 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5862.16358.1 ID=prot_Ecto-sp13_S_contig5862.16358.1|Name=mRNA_Ecto-sp13_S_contig5862.16358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp
MPSHPSSGNPRPKAYLSIGEYLRKAGAFKTVNVYYNEIISTHPSVALSED
GDTEDVDELAEGMIEAAQHGHLETLRFLAGKAQTGGEEGGVGTCIGERVG
CLMLHLAAEAGHDTIVHYLVEDLWVDVDEATVRGMTALHYAAKANRTAVV
RELSRLGADLEAKNDAGQVPSQLTKDRLLRRLFQQYLGGGGWGGAGSGAG
GAMVDRFVSPSASRVVDYVAVMTVKLAPQLRAECDELSDLKQATVAQVCR
FPEEDHEDTPMTDASNLAEICTQSCGAQGGPLAAYGTLLTDTSGARSYVW
SKVLGVYQDAAQKGRARVHTALGPPPGERDGAVPAGETSARVVLVLARHP
YTAAFASICEHIAELILDEALNWGSLCEWPLDMEQERNQQIRFCMEHYAS
DLPLPLPSVQAEYTVLDRVLRYGDAHASHSSFPHLEEADLRCLTSRLGPD
TILVALSCLLQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf