mRNA_Ecto-sp13_S_contig5822.16290.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A6H5KZB1_9PHAE (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZB1_9PHAE) HSP 1 Score: 525 bits (1352), Expect = 5.100e-175 Identity = 345/493 (69.98%), Postives = 354/493 (71.81%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGD--------------------------------------------------------------------------------GGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDDEES 1239
VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRN+FMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLT +E+T NESE PVT AA+AA G+ GG AVEAMEVEG AP XXXXXXXXXXXXXXXXXV+GA+SGGSNSEGAVPA+ GVKRKKLSRFERKRL XXXXXXXXXXXX NGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAEL ERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGD+EES
Sbjct: 410 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNKFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTGHETTANESEAPVTAAAAAAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGAVEAMEVEGGGGDHVGAPXXXXXX---XXXXXXXXXXXXXXXXXVAGAESGGSNSEGAVPAATGVKRKKLSRFERKRLXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELGERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDEEES 897
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A835Z3G9_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G9_9STRA) HSP 1 Score: 244 bits (622), Expect = 9.190e-69 Identity = 209/421 (49.64%), Postives = 254/421 (60.33%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSN--LSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKR-----KKLSRFERKRLKKAKG-GECGERNGGRDSLAG--LEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDDE 1233
++D+E ESL+E++ G++ L+ L RV +NAMKQYRRTRPD S RA RAK LD HPL+ F RGM SA A R +++AM++FRPKETIFE+LGGGGTE K D+ +VMG VR ARV LL R + E + XXXXXXX XXXXXXXXXXXXXXXXXXX + LS+ ERKR+K+A GE R AG L H L XXXXXXXXXX RFAD +IGYG TEA +FVE A+QPRSVEK+GDGFA RL EA+LDVNPDEAVDM +KQR+LHWD+RK KFVKT+LAE+S+ K R +R E+GV+V AK GEI++KW++ S R+VGREGD+E
Sbjct: 414 ILDEETESLRELMSRGGASTGLAMLLRVSENAMKQYRRTRPDASKRACERAKELDLSGIHPLMQRFATRGMVSAEGAASRAAYLKAMTAFRPKETIFEVLGGGGTEVKTDVGRVMGDVRHAARVRNLLERARTHGTEEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPLSKAERKRVKRATAQGEDAAAVIARVRAAGGALAH-LGDGDGXXXXXXXXXXXXXXXXXXXXSSRFADPEHFIGYGVTEAGAFVEGAMQPRSVEKAGDGFATDRLAEAMLDVNPDEAVDMVRKQRVLHWDARKHKFVKTSLAEMSDNK---KRTVRNEAGVMVTAKKQKAGEIFSKWQKKSRREVGREGDEE 830
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: W7TM98_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM98_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.510e-45 Identity = 145/444 (32.66%), Postives = 209/444 (47.07%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGE-----THPLLVGFEARGMHSAA---AHAGRNQFMRAMSSFRPKETIFEL---------------------LGGGGTEAKGDMD---QVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDDEE 1236
++D+ENESL+ + +G L+ L RVC+NAMKQYRRTRPDPS AI RAK L E HPLL+G + + M + + + + ++ + FRP++T+ E+ G GG AK D++ +VM A+RK R + +S+ A E DG EA E A + G + A P G + KLS+ R+RLKK+ D+L EH++ ++ + D +I YG TE VE LQPRSVEK + A RLEEA+LDV PDEA++M K++R++HWD+RKKK+V+ T++EL E + G +K+RTESGV V + GEIY KW++ +N+ V G DE+
Sbjct: 506 LLDEENESLRLLTERNGGVLTSLWRVCENAMKQYRRTRPDPSKAAIRRAKALVGAEEGDMHVHPLLLGSDPKRMTAGGGLESLRAKEEMVKMLQGFRPQQTVLEVQRIDAGSLYKGLPVGERNRAVAGMGG--AKSDVEAGIKVMRAIRKEHGSAIKRKREKMANKQSQ----RAGLEREVDG----EASEENASMVDCSRAD------------------------------KDRGEHQCEAQPRPSGSDKAKLSKAARRRLKKSAA----------DTLDPGEHKMSQDLNGKRDLRAKD--------------YKDPNHFIEYGVTEHDQMVEDRLQPRSVEKGSEALLANRLEEALLDVQPDEALEMVKRKRIMHWDARKKKYVRATMSELGEGR--GQKKLRTESGVTVSGSSQATGEIYKKWQKRTNKTVSLAGGDED 883
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A662XA09_9STRA (RNA helicase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA09_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.030e-34 Identity = 135/409 (33.01%), Postives = 192/409 (46.94%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASA--AEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKK---LSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQV 1212
++D E E ++E++ S ++ L +VC+N+ K Y RTR DPS +I RAK L + HPL R A A ++ ++ SFRP +TIFE+ G + AK V+ V+KR +VH + +E+T + A+A AE D DA A S +SG ++ GS E P ++KK LS+FERK+LKK G ++ + KE + G F D+ YIGY + E L + + FA RLEEAILDVNPDEA++M KK+R+LHWD RKKKFVKTT EL+ + G+ K R ESGV V+ K GE+Y KW++ +++V
Sbjct: 64 LIDQETEYMQELL-RSHPQVAPLVKVCENSYKAYARTRADPSKLSIRRAKELAVKKVHPLFQQEYVREKSKAEKVA----YIDSLQSFRPPQTIFEIASGAHSSAKRSSPGVLMMVKKR-KVHGKIIASETTKASDKAKAKELAAAVNAEADKEDA---------------AGVSLESSGPARKKLKEDD------------GEAVGSEVEAEAPP----QKKKTIFLSKFERKQLKKRVAA------GEKEEAVMKQMAEAKEASNVGAALENEGVQTEEAGVDPSESFKDRENYIGY-MKDGDYTTEGFLAKNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSQ---GTLKRRNESGVSVRKKQQV-GEVYRKWQQKQHKRV 424
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A0N7L524_PLAHL (RNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L524_PLAHL) HSP 1 Score: 136 bits (343), Expect = 4.480e-31 Identity = 125/407 (30.71%), Postives = 187/407 (45.95%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKK---LSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQV 1212
++D ENE+++E + S ++ L +VC+NA K Y RTR DPS +I R K L + HPL F+ + + A + ++ ++ +FRP +TIFE+ G + AK V V+KR ++H + E+T + ++ +SA EA E E + N+EG ++ ++KK LS+ ERK+LKK R + E ++ K+ + G F D YI Y + E L + + FA RLEEAILDVNPDEA++M KK+R+LHWD RKKKFVKTT EL+ G+ K R ESGV V+ K GE+Y KW++ +++V
Sbjct: 433 LIDQENEAIQETL-RSHPQVAPLVKVCENAYKAYARTRADPSKNSIRRGKELAVKKVHPL---FQQEYVLDKSK-ADKAAYIDSLQTFRPPQTIFEIAVGSHSSAKRSSPGVQMMVKKR-KLHGKIIATETTKLDDKMKAKEESSAQN------AEAEEKESYNSEK---------------------------------VKKSELNNEGDSEEAVKAQKKKTYFLSKHERKQLKK------------RVAAGEKEEDVMKQLAATKEQSSSNTASEQDADVSGRSSFKDDDNYINY-MKDKDYTTEGFLATNADGGKVNAFAEARLEEAILDVNPDEAIEMNKKRRILHWDVRKKKFVKTTAGELTSH---GTLKRRNESGVSVRKKQQV-GEVYRKWQQKQHKRV 777
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A7S3LXT9_9STRA (RNA helicase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXT9_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.560e-29 Identity = 137/417 (32.85%), Postives = 207/417 (49.64%), Query Frame = 1
Query: 76 VCQNAMKQYRRTRPDPSGRAIARAKLLDRGET----HPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFEL-----LGGGGTEAKG-----DMDQ---------VMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPA--------SIGVKRKKLSRFERKRLKK-----AKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEAS-SFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVG 1215
+ +N MKQYRRTR + S + AK + + HPL+ G + R + +N+++R + +FRP +T+FE G G++ G M Q +M A+R+ H L RN T +++ A EG GD + E XXXXXX XXXXXXXXXXXXXXX + S+ G V S + +LS E+K+LKK A+ E R D + S GAM G + DK Y+ YG +A+ SF E LQP+S +S + A +++ A+LD++PD+AVD+ K+R+L WD++K+KFVK TL E++E + G +++RTE+G++ K PQGE+Y KWK+ +++++G
Sbjct: 1 ISENGMKQYRRTRTEASRGGVKTAKAIVKNNLIRAIHPLIAGCDPRSCSADVVE--KNKYVRMLQTFRPAQTVFETGIGTTTGNTGSKVNGGAHPQQMSQKTKLMKGTEMMKALREAT--HASLERNRKTVAQAQAAAREAGE--EGGAGDDDSDINDEDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDDEMSFTTARSSGMGLVSRRQSLAAVRSAAPSKVRLSITEKKKLKKKGLSQAEIREIALRKVANDKALANAGAVVSNADSASGSNANSKSAGGAMSQGLSDTYRDK-HYMAYGDEDATQSFAEEMLQPQSNLRSSESMNAMKMDRALLDISPDDAVDLNNKKRILRWDAKKRKFVKQTLQEMAENQKRGVKRMRTETGIISKKSALPQGEMYEKWKKRTHKEIG 410
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: K3X9Z7_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9Z7_GLOUD) HSP 1 Score: 129 bits (323), Expect = 1.780e-28 Identity = 130/405 (32.10%), Postives = 194/405 (47.90%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGG-RDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQV 1212
++D E E + +++ N +S L +VC NA K Y RTR DPS +I RAK + + HPL + + A + +++ ++ SFRP +TIFE+ G + K +M ++ + ++H + + E+T E + T DG + E ++ A ++ + A + S + AS K LS+ +RK++KK GE+ +A + XXXXXXXXXXXX F D+ YIGY E E L + + F RLEEAILDVNPDEA+++ KK+R+LHWD+RKKKFVKTT EL+ + G+ K R ESGV V+ K G IY KW++ N++V
Sbjct: 431 LIDQETEHMADLLKNHPQ-VSPLVKVCDNAYKAYTRTRADPSKLSIKRAKEIFAKKIHPLFL----EEYMKEDSKAEKVEYIESLQSFRPPQTIFEIASGTHSAKKNSAAVIM--MQGKRKLHEKIIKKEATKGEKDH--TGVLDKVYNDGDETTEELDEHKQALRKLLADAAA------------------------NRAAAEASKAVETAEASTSKKTFFLSKHDRKQIKKRVA--AGEKEADVMKEIAVAKEXXXXXXXXXXXXXXXXXXXXXXXXXXSKKSFVDRENYIGY-LKEGEHTTEEFLAKNADGGKVNSFQEARLEEAILDVNPDEAIELNKKRRILHWDTRKKKFVKTTAGELTAQ---GTLKRRNESGVNVRKKKEV-GAIYKKWQQRQNKRV 795
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A448ZCB2_9STRA (ATP-dependent RNA helicase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCB2_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.840e-28 Identity = 140/436 (32.11%), Postives = 193/436 (44.27%), Query Frame = 1
Query: 31 EMIGNSGSNLS-GLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGET--------------HPLLVGFEARGMHSAAAHAG-------------RNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSF---------VEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTL-AELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREG 1224
EM G + L L RVC NAMKQYRRTRP+ S A+ RAK + G HPLL G E + AA G RN+F++A+S FRPKET+FE GG + G V V K VH S +S +T+ + + +G + ++ A+G XXX +S + S+ A A V + ++S+ ER+RLKK + N SLA EK F D AF+I +ASS VEAALQP + G A RLEEA+LDV DE + +KQR++ WD K+K+V++++ AELS T S++++ ESG +VK+ GEIY KW++ +NR VGR G
Sbjct: 462 EMAGTEQAELMRSLTRVCNNAMKQYRRTRPEASREAVRRAKAILEGRKLKTGQRVGGASIPPHPLLRGMEME-QYEAAKSKGKIGTLNDLDNINKRNEFLKALSQFRPKETVFEAFATGGGKETG----VNSHVDKGRTVH------SSKKMDSSYAMTSMKNMRR-----QMRMSRDKGTTLVVAGSTLATEAAGDEGAXXXNAFVM-----------KSQKAVSKPATKAPTIVSKARMSKAERRRLKK-------DPNASVASLAKKYQHEEKRKKHMRGSD-----------------FRDNAFFI---ENDASSNAEEAQRQRQVEAALQPSAGSVKGITGNAMRLEEAMLDVVGDENAQLVQKQRMMRWDKSKRKYVQSSVGAELSG--TSYSKRVKLESGQIVKSDKLKLGEIYEKWQKKTNRSVGRSG 841
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A5D6Y2F7_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F7_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.420e-28 Identity = 141/423 (33.33%), Postives = 202/423 (47.75%), Query Frame = 1
Query: 1 VMDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRNQFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRNESTPNESEVPVTTAASAAEGD-GGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGGRDSLAG--LEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGR-----FADKAFYIGY---GTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGVVVKAKNAPQGEIYAKWKRASNRQVGREGDDEE 1236
++D E E + +++ N ++ L +VC+NA K Y RTR DPS +I RAK + + HPL F A M SA A A + +++ ++ SFRP +TIFE+ G + K VM ++ + ++H + R E+T E + T D GGD + X XXX + + A+ A K LS+F+RK+LKK G E + ++ A L+ E E XXXXXX A F D+ YIGY G F+ + V + F RLEEAILDVNPDEA+++ KK+R+LHWD RKKKFVKTT EL+ + G+ K R ESGV V+ K G IY KW++ N++V G+++E
Sbjct: 436 LIDQETEHMADVMKNHPQ-VAPLVKVCENAYKAYTRTRADPSKLSIKRAKDVLAKKIHPL---FMAEYM-SADAKAEKVEYIESLQSFRPPQTIFEIAAGAHSAKKNSAAVVM--MQGKRKLHGKIIRKEATKGEKDH--TGVLDRVYHDAGGDXXXXXXXDATQQLARXX------------------------XXXXXXXADAAARRQAALEALQPKKTFFLSKFDRKQLKKRVAGGANEADVLKEIAAAKQLQSETGGETGGGRDXXXXXXXXXXAPATAIASEARTKSFVDREHYIGYLKDGEHATEEFLARGAEGGKV----NSFQEARLEEAILDVNPDEAIELNKKRRILHWDVRKKKFVKTTAGELTAQ---GTLKRRNESGVSVRKKKEV-GAIYKKWQQRQNKRVFTGGEEDE 817
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Match: A0A7S2B9U3_9STRA (RNA helicase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B9U3_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.260e-28 Identity = 134/435 (30.80%), Postives = 191/435 (43.91%), Query Frame = 1
Query: 4 MDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLLDRGETHPLLVGFEARGMHSAAAHAGRN-----------------QFMRAMSSFRPKETIFELLGGGGTEAKGDMDQVMGAVRKRARVHRLLTRN---------ESTPNE-SEVPVTTAASAAEGDGGDAVEAMEVEGXXXXXXXAPPSSVASGXXXXXXXXXXXXXXXXXXXVSGAQSGGSNSEGAVPASIGVKRKKLSRFERKRLKKAKGGECGERNGGRDSLAGLEHELEKEXXXXXXXXXXXXSRVGAMGNGGPGRFADKAFYIGYGTTEASSFVEAALQPRSVEKSGDGFAAGRLEEAILDVNPDEAVDMAKKQRLLHWDSRKKKFVKTTLAELSERKTGGSRKIRTESGV--VVKAKNAPQGEIYAKWKRASNRQVGRE 1221
+D E E + ++ N +L+ L RVC NA KQY+RTRPDPS ++ RAK L+ HPLL+ + + H+ A N +++ +++ +RPK T+FE+ + A +M VR +VH+ L P E SEVP T G V + + P SS A AQ G E + P ++++SR ERKR K E G D+ XXXXX RV G F DK ++I Y + S VE L + + AGRLEE++LDVNPD + D+ KKQ+L HWD R K++++TL+EL+E K+R+ESG K+KN GEIY KWK+ + + V E
Sbjct: 397 LDAEQEVWQRLLTNE-DDLANLNRVCTNASKQYKRTRPDPSSASVRRAKALEMHHIHPLLLSLQDKH-HALQTGASSNRTVNPRHISGQAAVDTAEYLHSLTKYRPKATVFEVDAKSASNAAETGLDIMRRVRHSHKVHKGLQNGLMMDAGQGAVRPPEENSEVPAETTT-------GKEVPVKDEQ---------PLSSKAEEKKP-------------------AQRGEGEEEASCPKEP---KRRMSRAERKRKKSGIKQEIGTT----DNTXXXXXXXXXXXXXXXTPRKRVRKRV----IDDAGSFRDKDYFIAYQNVKESQ-VEGMLGNAPSKDGIEALIAGRLEESLLDVNPDNSNDLYKKQKLFHWDKRHNKYIRSTLSELNE---SSGVKLRSESGTRRSTKSKNVA-GEIYDKWKKRTQKTVASE 778 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5822.16290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5822.16290.1 >prot_Ecto-sp13_S_contig5822.16290.1 ID=prot_Ecto-sp13_S_contig5822.16290.1|Name=mRNA_Ecto-sp13_S_contig5822.16290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=423bp MDDENESLKEMIGNSGSNLSGLQRVCQNAMKQYRRTRPDPSGRAIARAKLback to top mRNA from alignment at Ecto-sp13_S_contig5822:4230..8580- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5822.16290.1 ID=mRNA_Ecto-sp13_S_contig5822.16290.1|Name=mRNA_Ecto-sp13_S_contig5822.16290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5822:4230..8580- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5822:4230..8580- >mRNA_Ecto-sp13_S_contig5822.16290.1 ID=mRNA_Ecto-sp13_S_contig5822.16290.1|Name=mRNA_Ecto-sp13_S_contig5822.16290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1269bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5822:4230..8580- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |