mRNA_Ecto-sp13_S_contig11909.1629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11909.1629.1
Unique NamemRNA_Ecto-sp13_S_contig11909.1629.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: D7FWK0_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK0_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 4.810e-86
Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 1 
Query:    4 EAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLSQDGEVLEIQVWEG 408
            EAIGDEVVSEIIAAT RGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMI+RIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLS+DGEVLE+Q   G
Sbjct:  304 EAIGDEVVSEIIAATGRGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIDRIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLSRDGEVLEMQEETG 438
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A6H5J6H3_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H3_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 1.170e-85
Identity = 129/135 (95.56%), Postives = 132/135 (97.78%), Query Frame = 1 
Query:    4 EAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLSQDGEVLEIQVWEG 408
            EAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMI+RIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLS+DGEVLE+Q   G
Sbjct:  434 EAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIDRIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLSRDGEVLEMQEETG 568
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A0D6R3E8_ARACU (AB hydrolase-1 domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3E8_ARACU)

HSP 1 Score: 124 bits (311), Expect = 1.360e-30
Identity = 60/140 (42.86%), Postives = 87/140 (62.14%), Query Frame = 1 
Query:    7 AIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIER---IQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSP--PLSQDGEVLEIQVWEGI 411
            A+ DE++  I+ ATE              +F SI+F+P+  +SF E++ R   + +PM LIYG+EDPWV P+WG ++KRQ P+ +YYEVSP+GH PH E P+ VN LL  W++   + GS   PL +D  +LE + W  I
Sbjct:  374 AVTDELLLRILEATEH--------PAAAASFVSIIFAPQGELSFNEILSRCREMNIPMCLIYGREDPWVKPVWGQQVKRQVPDAVYYEVSPAGHCPHSEVPEVVNFLLRGWIKSMESEGSMALPLHEDPNLLESEFWRKI 505
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A7S0PPB2_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PPB2_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 1.740e-30
Identity = 63/135 (46.67%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   10 IGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERI---QVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAG--GSPPL-SQDGEVLEIQ 396
            I D++V  IIA T+              AF S+V+SPK  MSF++M+ R+    +P+AL+YGKEDPWVVPLWG R+KR      YYE+SP GH P HE P + N+++D W  Y  AG  G+PP  S DG    IQ
Sbjct:  224 IDDDLVRRIIAPTDN--------PNALSAFCSVVWSPKSKMSFDDMLTRLAASDIPIALVYGKEDPWVVPLWGQRLKRAVSRADYYEISPGGHCPAHECPASTNSIIDQWTTYCEAGCVGAPPSGSSDGSGRLIQ 350
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A090LY37_OSTTA (Unnamed product n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090LY37_OSTTA)

HSP 1 Score: 119 bits (297), Expect = 2.350e-29
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 1 
Query:    1 SEAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQ---VPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGS----PPLSQDGEVLEI 393
            +EAI D ++ +II  TE               F S+V+SPK +MSF++M ERI+   +P+AL+YGKEDPWVVPLWG R+KR  P   YYE+SP GH P HE P+TVN++L  +L++  +       P  S DG    I
Sbjct:  233 AEAIDDRLIRDIIEPTEN--------KNALSTFCSVVWSPKSAMSFDDMTERIRDSNIPVALVYGKEDPWVVPLWGQRLKRAIPRAHYYELSPVGHCPAHEAPETVNSILSRYLQFCESTAEETQPPSGSADGRAKLI 362
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A2K3D3Q0_CHLRE (AB hydrolase-1 domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D3Q0_CHLRE)

HSP 1 Score: 119 bits (298), Expect = 3.450e-29
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 1 
Query:   22 VVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWL 333
            ++S I+ AT+          G  +AFTSIV SPK  +SF+E+++R+  P+ L+YGKEDPWV PLWG R+KR+ PE +Y E+SP+GH PHHETP  VN  L  W+
Sbjct:  211 LISRIVEATQH--------PGALDAFTSIVLSPKGELSFDELLDRLACPVLLLYGKEDPWVRPLWGQRLKRRLPEAMYLELSPAGHCPHHETPAAVNRALRAWV 306
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A836BCE3_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BCE3_9CHLO)

HSP 1 Score: 119 bits (298), Expect = 3.700e-29
Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 1 
Query:   22 VVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEY-----ASAGGSPPLSQDGEV 384
            +++ I+ AT+          G  +AFTSIV SPK  +SF+E+++R+  P+ L+YGKEDPWV PLWG R+KR+ PE LY E+SP+GH PHHETP  VN  L  W+       A+A G+      G V
Sbjct:  233 LIARIVEATQH--------PGALDAFTSIVLSPKGELSFDELLDRLACPVLLLYGKEDPWVRPLWGQRLKRRLPEALYLELSPAGHCPHHETPAAVNRALRAWVAAQEARPAAAAGAXXXXXXGPV 350
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A8J4DFR3_9CHLO (AB hydrolase-1 domain-containing protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DFR3_9CHLO)

HSP 1 Score: 119 bits (298), Expect = 3.830e-29
Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 1 
Query:   22 VVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEY-----ASAGGSPPLSQDGEVLEI-QVWEGI 411
            +V+ I+ ATE          G  +AFTSIV SPK  +SF+E+++R++ P+ L+YGKEDPWV PLWG R+KR+ P   Y E+SP+GH PHHE P  VN  L  WL       A   G    S+ G  L++   WE +
Sbjct:  268 LVARIVEATEH--------PGALDAFTSIVLSPKAELSFDELVDRLRCPVLLLYGKEDPWVRPLWGQRMKRRLPAATYLELSPAGHCPHHEAPAAVNRALRTWLAAEERVRAQGTGDQDPSEAGIGLDVGSSWEVV 395
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: D8TNS6_VOLCA (AB hydrolase-1 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNS6_VOLCA)

HSP 1 Score: 117 bits (293), Expect = 7.590e-29
Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 1 
Query:   22 VVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEYASAGGSPPLSQDG 378
            +V+ I+ ATE          G  +AFTSIV SPK  +SF+E+++R+  P+ L+YGKEDPWV PLWG R+KR+ P   Y E+SP+GH PHHE P  VN  L  W+       +  ++++G
Sbjct:  194 LVARIVEATEH--------PGALDAFTSIVLSPKAELSFDELVDRLHCPVLLLYGKEDPWVRPLWGQRLKRRLPTATYLELSPAGHCPHHEAPAAVNKALRAWVAAQERARTQGVAEEG 304
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BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Match: A0A8J4AT54_9CHLO (AB hydrolase-1 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AT54_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 1.980e-28
Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 1 
Query:   22 VVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMIERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETPKTVNALLDDWLEY-----ASAGGSPPLSQDGEVLEI-QVWEGI 411
            +V  I+ ATE+         G  +AFTSIV SPK  + F+E+++R+Q P+ L+YGKEDPWV PLWG R+KR+ P   Y E+SP+GH PHHE P  VN  L  W+       A   G    S+ G  L++   WE +
Sbjct:  268 LVVRIVEATEQ--------PGALDAFTSIVLSPKAELGFDELVDRLQCPVLLLYGKEDPWVRPLWGQRLKRRLPAATYLELSPAGHCPHHEAPAAVNRALRTWVAAQERVRAQGTGDQDPSEAGIGLDVGSNWEVV 395
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11909.1629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWK0_ECTSI4.810e-8694.81AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A6H5J6H3_9PHAE1.170e-8595.56AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A0D6R3E8_ARACU1.360e-3042.86AB hydrolase-1 domain-containing protein n=2 Tax=A... [more]
A0A7S0PPB2_9CHLO1.740e-3046.67Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A090LY37_OSTTA2.350e-2944.93Unnamed product n=2 Tax=Ostreococcus tauri TaxID=7... [more]
A0A2K3D3Q0_CHLRE3.450e-2950.96AB hydrolase-1 domain-containing protein n=2 Tax=C... [more]
A0A836BCE3_9CHLO3.700e-2946.03AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A8J4DFR3_9CHLO3.830e-2944.12AB hydrolase-1 domain-containing protein n=3 Tax=V... [more]
D8TNS6_VOLCA7.590e-2944.54AB hydrolase-1 domain-containing protein n=1 Tax=V... [more]
A0A8J4AT54_9CHLO1.980e-2843.38AB hydrolase-1 domain-containing protein n=2 Tax=V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11909contigEcto-sp13_S_contig11909:321..2005 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score268.9
Seed ortholog evalue1.4e-69
Seed eggNOG ortholog2880.D7FWK0
Model size414
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
Cds size414
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462629.7665772-CDS-Ecto-sp13_S_contig11909:320..4431681462629.7665772-CDS-Ecto-sp13_S_contig11909:320..443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11909 321..443 +
1681462629.7869081-CDS-Ecto-sp13_S_contig11909:991..11291681462629.7869081-CDS-Ecto-sp13_S_contig11909:991..1129Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11909 992..1129 +
1681462629.7964685-CDS-Ecto-sp13_S_contig11909:1852..20051681462629.7964685-CDS-Ecto-sp13_S_contig11909:1852..2005Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11909 1853..2005 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11909.1629.1prot_Ecto-sp13_S_contig11909.1629.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11909 321..2005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11909.1629.1

>prot_Ecto-sp13_S_contig11909.1629.1 ID=prot_Ecto-sp13_S_contig11909.1629.1|Name=mRNA_Ecto-sp13_S_contig11909.1629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
SEAIGDEVVSEIIAATERGPSNHDYGVGGHEAFTSIVFSPKVSMSFEEMI
ERIQVPMALIYGKEDPWVVPLWGHRIKRQRPETLYYEVSPSGHSPHHETP
KTVNALLDDWLEYASAGGSPPLSQDGEVLEIQVWEGI*
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mRNA from alignment at Ecto-sp13_S_contig11909:321..2005+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11909.1629.1 ID=mRNA_Ecto-sp13_S_contig11909.1629.1|Name=mRNA_Ecto-sp13_S_contig11909.1629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1685bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11909:321..2005+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGAGGCCATCGGAGATGAAGTGGTGTCGGAGATCATCGCAGCAACAGA
GCGAGGCCCGAGCAACCATGATTACGGCGTGGGTGGGCACGAGGCGTTTA
CGAGCATCGTGTTTTCGCCGAAGGTGGGGGCTGCAGTTTTTGCTGTTTTC
GTCACCTCAAGAGAAAGCAAAACATTCTGATTCACGTTTTGATGCATTCC
CACTGCCTTCACAACTCTCGCCTCCTGCAAACCGGGAAGATATGAGTTTT
ATTGTTCCCGTGCCATCATCCCAACATAGCGACCTTGGGGGTTCCACGTG
TAGCGGAAAGTGTTGGCCGGATAAGAGACGGAAAGCGAGCGGGCGGGCGT
GCTGAAATCACGACTAAATTTTCCACCACGAGCGTTGACAGGAAGAACAA
GTAGTCAAGATATCTTGGACTAGAAAGACGCAAGTTACGAAAATATTGGA
CTGAGGCCGTGGATCTCCTGCAACGCGCACGTTTCGAGTATGCTTCGCTT
CCCTCGTCCTGCGAGTTGTGATACCCTGCAAAAACAATGGACGCTGTGTT
TGCAGCTCTGCTGGTGTTCATTGGCTTTGACTTTTGGGCCAACGCATCCT
TTTCCTCGTTCGATATCGTCCCTGTTGCGTCCCTGTGGTATCGGCTGACC
GCTGCTGCCCCGCTCCTACAGGTTTCAATGAGCTTCGAGGAAATGATCGA
GCGCATTCAGGTGCCCATGGCTCTTATCTACGGCAAGGAGGACCCTTGGG
TGGTACCTCTGTGGGGACACCGAATAAAACGACAGCGGCCAGAGACCCTC
TACTACGAGGTAACTCCGACCCCCTACTGCGCCCCCCAAGCGCAAGAAAA
GAAAACACTCAACAAAAACCAAAACACACCCAACCATGTACTCCGCAATA
GACAAGGAAAATGATCAGCCGGTCAAGTTTACCATGAAACGTTGGGACGG
AGGGGGGGGACTTCTCATGTTTTGATGCATAAGTTGTTGGACCATTAGCC
ACGCGTCCTCGAGAGGACCGAGCAGCGGGGGGGGGTCAACATGCCGCGGC
GGAATCCCTACAATGCCTCAAGGTGCTCCTCGATGCGAAGCGAGAGTGCA
TTTTACCCCCAAGATGTTGGCGCAGTCAGATGTTATTGAGCTCCTTAAGC
CAGAACGAGTACTGGTGGCGCTTCCACTTGTACAACATCGGGTAGGTTTG
GGATTGATGTTCGTTTTCCAACCCGTGCAGAATCCCCAGCGTACGGTCGA
CCAGGTAATGTGGAGCGAGCGGCTATCCTTCTCCGAAAAATTCTAGTAGA
CCGTTTCTTTCGTTTTGTCCGGGCGTTGTTTTTCTGGATAGCCTGTCCTA
TAACTTCATGAAACACGGTTGGGGGTTTGTGATTAGAAAACCTGGTACCG
TGCCGTGGCTAGAAGTGTAAGTTTTTTCGTACCATTAAACCATGCGTCGC
TCTTAGGTAAGGTCGTCCAAGGCAAGCGAAGCAAGCTCAAGACCCCGCCC
CTCCCCCCCACCTCCGAACTATCATGCGCTAGGTTTCCCCTTCAGGCCAC
AGCCCTCACCACGAGACGCCGAAGACGGTGAACGCTCTATTGGACGACTG
GCTGGAGTACGCTAGCGCGGGAGGATCCCCCCCGCTATCGCAGGACGGGG
AGGTTCTGGAGATACAGGTGTGGGAAGGGATTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11909:321..2005+

>mRNA_Ecto-sp13_S_contig11909.1629.1 ID=mRNA_Ecto-sp13_S_contig11909.1629.1|Name=mRNA_Ecto-sp13_S_contig11909.1629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11909:321..2005+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGAGGCCATCGGAGATGAAGTGGTGTCGGAGATCATCGCAGCAACAGA
GCGAGGCCCGAGCAACCATGATTACGGCGTGGGTGGGCACGAGGCGTTTA
CGAGCATCGTGTTTTCGCCGAAGGTTTCAATGAGCTTCGAGGAAATGATC
GAGCGCATTCAGGTGCCCATGGCTCTTATCTACGGCAAGGAGGACCCTTG
GGTGGTACCTCTGTGGGGACACCGAATAAAACGACAGCGGCCAGAGACCC
TCTACTACGAGGTTTCCCCTTCAGGCCACAGCCCTCACCACGAGACGCCG
AAGACGGTGAACGCTCTATTGGACGACTGGCTGGAGTACGCTAGCGCGGG
AGGATCCCCCCCGCTATCGCAGGACGGGGAGGTTCTGGAGATACAGGTGT
GGGAAGGGATTTGA
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