prot_Ecto-sp13_S_contig5807.16259.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5807.16259.1
Unique Nameprot_Ecto-sp13_S_contig5807.16259.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length277
Homology
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A6H5L453_9PHAE (Protein transport protein SEC23 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L453_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 2.050e-181
Identity = 258/277 (93.14%), Postives = 262/277 (94.58%), Query Frame = 0
Query:    1 MTSPPXXXPLRFSSYSLLEGGDTAAGSLGLPTGALFAPFSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILKLLRGVDDGTGATRPGQPRKQQQAVQGNGPSSAG 277
            MTS P   PLRFSSYSLLEGGDTAAGSLGLPTGALFAPF+ELQP P RIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAA+PAH+LVVDGNMRE ALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGR GAAVADVLPGGETLSDQDVDRRLSEGEKDHFV VRGGREALCTILKLLRGV +GTGATRPGQ R  QQA  GNGPSSAG
Sbjct:    1 MTSSPPPPPLRFSSYSLLEGGDTAAGSLGLPTGALFAPFAELQPSPARIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAAAPAHLLVVDGNMREDALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRPGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVSVRGGREALCTILKLLRGVGNGTGATRPGQ-RSNQQAGLGNGPSSAG 276          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: D8LGM0_ECTSI (Protein transport protein SEC23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM0_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 9.300e-92
Identity = 159/192 (82.81%), Postives = 161/192 (83.85%), Query Frame = 0
Query:  106 EMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTI-----------------------LKLLRGVDDGTGATRPGQPRKQQQAVQGNGPS 274
            EMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAA+PAHVLVVDGNMRE ALVDLARSVDEVL KMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCT+                       LKLLRGV DGTGATRPGQ  KQQQA  G GPS
Sbjct:   60 EMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAAAPAHVLVVDGNMREDALVDLARSVDEVLSKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTVEPEALAAATDYFEDLGEKALSQVLKLLRGVGDGTGATRPGQGSKQQQAGLGTGPS 251          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A835ZAM5_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.860e-46
Identity = 105/247 (42.51%), Postives = 136/247 (55.06%), Query Frame = 0
Query:   10 LRFSSYSLLEGGDTAAGSLGLPTGALFAPFSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQA----ASPAHV--LVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILKLLRGVD 250
            LRF + S +EG     G  GLP GA+ +PF+ + PPPP +   P LC  C+AY +PFC  D  +G WRCCFC+  NP Y+E          R   PE+A   VEY +QD    ++  + + LATGPHRRR  +A    AS  H   LV+DGN    AL DLA S+ EVL ++D  + ++L+VFTGVV+V+RL R GAAVA VLP    L        L       F  +R     L  IL  L+G D
Sbjct:   29 LRFGARSAVEG-----GRQGLPCGAVLSPFAHVHPPPPALHLAPALCLNCAAYINPFCSTDSASGTWRCCFCKHSNPGYSE----------RSKGPELASSVVEYIQQDAHSQIH-TAGVQLATGPHRRRGSEATTAAASGTHAIALVIDGNACGQALADLAGSIAEVLPQLDQGSSVALLVFTGVVTVFRLARDGAAVAHVLPATRVLPPAATLAALGSAAGATFGTLRWDGAKLAQILSSLKGSD 259          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: UPI0009E31BD1 (protein transport protein SEC23 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E31BD1)

HSP 1 Score: 80.9 bits (198), Expect = 1.770e-13
Identity = 62/239 (25.94%), Postives = 107/239 (44.77%), Query Frame = 0
Query:   10 LRFSSYSLLEGGDTA-AGSLGLPTGALFAPFSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILKLLR 247
            ++FS++ +L+    A   SLG   GAL +P  E+ P P  + R    C  C AYP+ +  V  G+G+W+C  C+K N   +E    +    H   +PE++   ++Y +             +   G     D + ++P   LV+D  + E+ L  L  S+   +  +     I ++ +   +S+Y       A ADVLPGG + S++ + + L  G   +  P+        TI   LR
Sbjct:  157 VQFSAHKILKRKKQANISSLGF--GALVSPGREITPGPQVVQRDAHRCQNCGAYPNLYSEVLIGSGKWKCVICKKLNGSDSEYIAANKEDLHH--WPELSSSTIDYVQSG-----------NRRPGYVPVSDSRMSAPVF-LVIDECLDEAHLQHLQGSLHAFVDSLPQNMRIGIITYGRTISIYDFSEGSVASADVLPGGNSPSEESL-KVLIYGSGIYLSPMHASLSVAHTIFSSLR 378          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A2I0W3H1_9ASPA (Protein transport protein SEC23 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W3H1_9ASPA)

HSP 1 Score: 74.7 bits (182), Expect = 2.100e-11
Identity = 61/237 (25.74%), Postives = 105/237 (44.30%), Query Frame = 0
Query:   12 FSSYSLLEGGDTA-AGSLGLPTGALFAPFSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILKLLR 247
            FS++ +L+    A   SLG   GAL  P  E+ P P  + R    C  C AY + +  V   +G+W+C  C++ N    E +I +S  + R   PE +  +++Y +             +   G     D + ++P   LV+D  + E+ L  L  S+   +  +     I ++ +   +S+Y       A ADVLPGG + S++ + + L  G   +  P+      + TI   LR
Sbjct:  151 FSAHKVLKRKKQANVSSLGF--GALVTPGKEINPGPQVVQRDAYRCQNCGAYSNIYSEVLISSGQWQCVICKRLNSSDGE-YIAASKEDLR-HLPEFSSPSIDYVQSG-----------NRRPGYVPVSDSRMSAPIF-LVIDECLDEAHLQHLQGSLHAFVDSLPQNMRIGIITYGRTISIYDFSEGSVASADVLPGGNSPSEESL-KTLIYGTGIYLSPMHASLSVVHTIFSSLR 370          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A448ZFN0_9STRA (zf-Sec23_Sec24 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFN0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.540e-8
Identity = 58/216 (26.85%), Postives = 93/216 (43.06%), Query Frame = 0
Query:   53 PVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEY--------AEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVL---------GKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGRE--ALCTILKLLRGV 249
            PVLC  C AY +P+  +D  +G W C  C  EN    ++    S     D    M+   +EY        A+ D      G +  +      + ++    +  ++L+VD N+       +A +V+ +          G   P+A I LVVF   VS+Y+LG SG A ADV    E+ +D  V     E ++ +   ++ G E  +L   L  + GV
Sbjct:   93 PVLCVSCLAYMNPYAEMDKKSGIWSCPLCGHENVVPTDELYPGS-----DIMTAMSSSCIEYRQAISKTNADDDEPEKQIGSNGKNSTYNGLQEKEEDYCT--YILLVDENLSPKDGQAIAPAVEAIFKEQIANAEDGDAHPKARIGLVVFGKSVSIYQLGFSGLASADVYMPNESDADNTVFDAAVE-KRSYLAEIQTGGEFTSLRNSLSSIFGV 300          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: T1KWU0_TETUR (Protein transport protein SEC23 n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KWU0_TETUR)

HSP 1 Score: 60.8 bits (146), Expect = 8.510e-7
Identity = 61/226 (26.99%), Postives = 89/226 (39.38%), Query Frame = 0
Query:   10 LRFSSYSLLEGGDTAAGSLGLPTGALFAPFSELQPPP-PRIPRQPVLCTF--CSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGL-SALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVP 231
            +RF+ ++L       A  + LP G LF P  E    P P I  +PVLCT   C A  +P C+VD     W C FC   NP          PA + +              QDLT +   + S L         R      P  + VVD  + E  L  L  S+      +   AL+ L+ F  ++S++ L  S  A + V  GG+  + + +   L     +   P
Sbjct:   19 VRFN-WNLWPQSKVEATKIVLPLGCLFTPLKESSTRPIPPITYEPVLCTRQNCRAILNPLCQVDNRARIWICAFCFNRNPF---------PASYNNI-------------QDLTQLAETMFSTLDYTI----TRAPSGTGPIFLFVVDTCLDEEELTSLKSSIQSSFALLPQNALVGLITFGRIISLWEL-NSSCAKSFVFQGGKDYTAKQIQEWLGISISNRAAP 216          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A1U8BD21_NELNU (Protein transport protein SEC23 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8BD21_NELNU)

HSP 1 Score: 60.1 bits (144), Expect = 1.530e-6
Identity = 63/234 (26.92%), Postives = 96/234 (41.03%), Query Frame = 0
Query:   14 SYSLLEGGDTAAGSLGLPTGALFAP---FSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENP---CYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDL--------TGVLNG--LSALSLAT--------------GPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDV 217
            S++      + A SL +P   +  P   F+EL    P +P  P++C+ C A  +P+ RVD  +  W C FC ++NP    YA     + PAE    FP  +     +  + L          +  G  LS+ SL++                    D +   PA V VVD    E  L  L   +  V+ ++   AL+ LV F  +VSVY LG    +   +  G   LS   +
Sbjct:   15 SWNSWPASKSEASSLVIPLSVMCTPLMEFTEL----PLLPYDPLVCSRCGAVLNPYARVDYQSRLWVCPFCYQKNPFPRSYAGIGENNLPAE---LFPTYSTVEYHHGRKGLGLGSNINSNAIWGGNRLSSSSLSSLMSXXXXXXXXXXXSSLSCTDSRGNGPAFVFVVDTCSPEEELRALKNELLLVVAQLPENALVGLVTFDSMVSVYDLGFVDCSKVVLFHGERELSSDQI 241          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A7S1NFL3_9EUGL (Protein transport protein SEC23 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NFL3_9EUGL)

HSP 1 Score: 59.3 bits (142), Expect = 2.720e-6
Identity = 57/215 (26.51%), Postives = 93/215 (43.26%), Query Frame = 0
Query:   30 LPTGALFAPFSELQPPPPRIPRQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKEN--PCYAEDFIGSSPAEH-RDSFPEMACKAVEYA-EQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGAAVADVLPGGETLSDQDVDRRLSEGEKDHFVP--VRGGREA 238
            LP   L+ P        P +  +PVLC  C A  +P CRVD  +  W C FC   N  P +       +PA + R+ +P+     +EY  ++  TG                       +P +   +D  M+   L  L  S+ + L  +  +AL+ +V F  +V+V+ +G +    + VL GG+  S      ++S+  + HF P  V G R+A
Sbjct:   33 LPLSLLYTPLKAKSSTLPLLETEPVLCKGCKAILNPSCRVDWTSRLWVCPFCLTRNALPPHYAGVNPQNPASYPRELYPQNTI--IEYLIKRPPTG-----------------------NPVYFFCIDTCMQTDELESLKDSILQSLSLLPEDALVGVVTFGAMVTVWEVGFTELHKSYVLGGGKEYSTD----QMSDYLQVHFAPGSVPGQRQA 218          
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Match: A0A1E7F507_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F507_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.220e-5
Identity = 52/196 (26.53%), Postives = 78/196 (39.80%), Query Frame = 0
Query:   53 PVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEHRDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVLVVDGNMRESALVDLARSVDEVLGKMD---PEALISLVVFTGVVSVYRLGRSGAAVADV-LPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILK 244
            PVLC  C AY +PF  +D  TG W C  C ++N    +     S          +    VEY +                         +     ++LVVD N+       +  +++ +L       P+A I LVVF   VS+Y+LG SG A AD+ +P  +   + D D R       +   V+ G +   T LK
Sbjct:  115 PVLCLTCLAYLNPFAEMDYKTGIWACPLCGQDNVVPKKQLREGSTI-----MTALQSSCVEYRQTTYE-----------VDEDDEDEKEEPDYCTYLLVVDENLSPKDGQAIGPTMEAILNDQSSTCPKARIGLVVFGKSVSMYQLGLSGLASADIYVPTDDEEFEIDTDNRA------YLAEVQSGGDDNLTSLK 288          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5807.16259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L453_9PHAE2.050e-18193.14Protein transport protein SEC23 n=1 Tax=Ectocarpus... [more]
D8LGM0_ECTSI9.300e-9282.81Protein transport protein SEC23 n=1 Tax=Ectocarpus... [more]
A0A835ZAM5_9STRA2.860e-4642.51Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
UPI0009E31BD11.770e-1325.94protein transport protein SEC23 n=1 Tax=Phalaenops... [more]
A0A2I0W3H1_9ASPA2.100e-1125.74Protein transport protein SEC23 n=1 Tax=Dendrobium... [more]
A0A448ZFN0_9STRA3.540e-826.85zf-Sec23_Sec24 domain-containing protein n=1 Tax=P... [more]
T1KWU0_TETUR8.510e-726.99Protein transport protein SEC23 n=1 Tax=Tetranychu... [more]
A0A1U8BD21_NELNU1.530e-626.92Protein transport protein SEC23 n=1 Tax=Nelumbo nu... [more]
A0A7S1NFL3_9EUGL2.720e-626.51Protein transport protein SEC23 n=1 Tax=Eutreptiel... [more]
A0A1E7F507_9STRA2.220e-526.53Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006895Zinc finger, Sec23/Sec24-typePFAMPF04810zf-Sec23_Sec24coord: 53..87
e-value: 4.7E-9
score: 36.1
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 146..272
e-value: 6.7E-10
score: 40.6
NoneNo IPR availableGENE3D2.30.30.380coord: 50..99
e-value: 3.6E-8
score: 35.5
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 22..247
IPR036174Zinc finger, Sec23/Sec24-type superfamilySUPERFAMILY82919Zn-finger domain of Sec23/24coord: 43..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5807contigEcto-sp13_S_contig5807:1353..6601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5807.16259.1mRNA_Ecto-sp13_S_contig5807.16259.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5807 1323..6601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5807.16259.1 ID=prot_Ecto-sp13_S_contig5807.16259.1|Name=mRNA_Ecto-sp13_S_contig5807.16259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MTSPPPPPPLRFSSYSLLEGGDTAAGSLGLPTGALFAPFSELQPPPPRIP
RQPVLCTFCSAYPSPFCRVDPGTGRWRCCFCEKENPCYAEDFIGSSPAEH
RDSFPEMACKAVEYAEQDLTGVLNGLSALSLATGPHRRRDRQAASPAHVL
VVDGNMRESALVDLARSVDEVLGKMDPEALISLVVFTGVVSVYRLGRSGA
AVADVLPGGETLSDQDVDRRLSEGEKDHFVPVRGGREALCTILKLLRGVD
DGTGATRPGQPRKQQQAVQGNGPSSAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006895Znf_Sec23_Sec24
IPR036465vWFA_dom_sf
IPR037364Sec23
IPR036174Znf_Sec23_Sec24_sf