prot_Ecto-sp13_S_contig5803.16254.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5803.16254.1
Unique Nameprot_Ecto-sp13_S_contig5803.16254.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length454
Homology
BLAST of mRNA_Ecto-sp13_S_contig5803.16254.1 vs. uniprot
Match: D8LQX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX9_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 6.890e-171
Identity = 380/454 (83.70%), Postives = 386/454 (85.02%), Query Frame = 0
Query:    1 MQILKKLLNGPGGAAGGRMFKEKRRKGAWPGSDKEMEGNGPFPGRKGSSGDAGAATSTRGGLDKVGGRGGGGGQDATPGEAVGIGGMPLNYGYPLGYPVGGAGAARGGYPMGGGFGGIPDFASFQHGVPGXXXXXXXXXXXQPPGGAPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGMGIISGKSSGDGRNKPPSGNLDQGGXXXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFLGDXXXXXXXXXDENGLKEMRDNMAAAAKIXXXXXXXXXXDASAAEAAVGTAXXXXXXXXXXXXXXXXXXXXXXXAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXSAGAPTMEISLDGGSXXGMGAPQRGPGGSESAGHSDGRVVGGMEIVGHQV 454
            MQILKKLLNGPGGAAGG+MFKEKRRKGAWPGSDKEMEGNGPFPG KGS+GDAGAATSTRGG DKVGGRGGGGG DA PGEAVGIGGMPLNYGYPL             YPMGGGFGGIPDF+SFQHGVPG           QPPGGAPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SAGMGIISGK +GDGRNKPP G+LDQGGXXXXXXXX   MLTLTMDKEADGP KGAGGGSAASFL  XXXXX    DENGLKEMRDNMAAA   XXXXXXXXXXDASAAEAAVGTA XXXXXXXXXXXX          AAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXX AGAPTMEISLD   XX   APQRGPGGSE AG SDGRVVGGMEIVGHQ+
Sbjct:    1 MQILKKLLNGPGGAAGGKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGFDKVGGRGGGGGHDAAPGEAVGIGGMPLNYGYPLXXXXXXXXXXXXXYPMGGGFGGIPDFSSFQHGVPGGPSIPPYPNYPQPPGGAPAGGFKGVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANQ-SAGMGIISGKPAGDGRNKPP-GDLDQGGXXXXXXXX---MLTLTMDKEADGPTKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAAXXXXXXXXXXXXXDASAAEAAVGTAGXXXXXXXXXXXXVDAVAGPSGAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXAGAPTMEISLDXXXXXXXXAPQRGPGGSEGAGDSDGRVVGGMEIVGHQL 449          
BLAST of mRNA_Ecto-sp13_S_contig5803.16254.1 vs. uniprot
Match: A0A6H5L035_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L035_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 8.940e-68
Identity = 222/412 (53.88%), Postives = 225/412 (54.61%), Query Frame = 0
Query:  206 SAGMGIISGKSSGDGRNKPPSGNLDQGGXXXXXXXXXXXMLTLTMDKEADGPRKGAGGGSAASFLGDXXXXXXXXXDENGLKEMRDNMAAAAKIXXXXXXXXXXDASAAEA------------------------------------------------------------------------------------------------------------------------------------------------------------------AVGTAXXXXXXXXXXXXXXXXXXXXXXXAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXX-SAGAPTMEISLDGGSXXGMGAPQRGPGGSESAGHSDGRVVGGMEIVGHQV 454
            SAGMGIISGK SGDGRNKPPSG+LDQGGXXXXXXXXX  MLTLTMDKEADGPRKGAGGGSAASFL  XXXXX    DENGLKEMRDNMAA    XXXXXXXXXXDAS AE                                                                                                                                                                   AVGTA XXXXXXXXXXXXXXXXXXXXX AAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPF PYSPTALIGGXXXXXX  AGAPTMEISLDGGS  G+GAPQRGPGGSE  G SDGRVVGGMEIVGHQ+
Sbjct:   40 SAGMGIISGKPSGDGRNKPPSGDLDQGGXXXXXXXXX--MLTLTMDKEADGPRKGAGGGSAASFLXXXXXXXKLSMDENGLKEMRDNMAAXXXXXXXXXXXXXXDASVAETTYQLSNRPPYCNRRVWTGAPLPPFYIQLNEQTVPAKRPASEAPSDQPPPKSMAPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADNXXXXDGSGAGSKRQHFQFAYPSPAHFAQQVAVGTAGXXXXXXXXXXXXXXXXXXXXXAAAGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFLPYSPTALIGGXXXXXXXGAGAPTMEISLDGGSGGGVGAPQRGPGGSEGVGDSDGRVVGGMEIVGHQL 449          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5803.16254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQX9_ECTSI6.890e-17183.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L035_9PHAE8.940e-6853.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5803contigEcto-sp13_S_contig5803:3043..8568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5803.16254.1mRNA_Ecto-sp13_S_contig5803.16254.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5803 3043..8568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5803.16254.1 ID=prot_Ecto-sp13_S_contig5803.16254.1|Name=mRNA_Ecto-sp13_S_contig5803.16254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=454bp
MQILKKLLNGPGGAAGGRMFKEKRRKGAWPGSDKEMEGNGPFPGRKGSSG
DAGAATSTRGGLDKVGGRGGGGGQDATPGEAVGIGGMPLNYGYPLGYPVG
GAGAARGGYPMGGGFGGIPDFASFQHGVPGAPNIPPYPNYPQPPGGAPAG
GFKGVGMGYGAPFSAPGMASNAACGAAASQQQEQSQAAAYAAAYAAAATT
HAANQSAGMGIISGKSSGDGRNKPPSGNLDQGGGGGGGGGGGGGMLTLTM
DKEADGPRKGAGGGSAASFLGDGGGLLKLSMDENGLKEMRDNMAAAAKIV
QQHHAGGGGDASAAEAAVGTAGAAGANGAEGGAGVDAVAGASGAAAGRPF
PGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGGG
GGGSSAGAPTMEISLDGGSGGGMGAPQRGPGGSESAGHSDGRVVGGMEIV
GHQV
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