prot_Ecto-sp13_S_contig57803.16215.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57803.16215.1
Unique Nameprot_Ecto-sp13_S_contig57803.16215.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57803.16215.1 vs. uniprot
Match: D7FZI9_ECTSI (BUB1 N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI9_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 3.140e-24
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 
Query:    8 ATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMAEK 52
            ATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMAEK
Sbjct:  154 ATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMAEK 198
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BLAST of mRNA_Ecto-sp13_S_contig57803.16215.1 vs. uniprot
Match: A0A835ZDF8_9STRA (BUB1 N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 9.560e-7
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    8 ATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMAEK 52
            A++LSNA++LF++LYK  IG   A FWV WA  AE + +Y MA+K
Sbjct:  122 ASYLSNADELFRYLYKNEIGTGCALFWVSWAWVAEASKDYVMADK 166
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57803.16215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZI9_ECTSI3.140e-24100.00BUB1 N-terminal domain-containing protein n=1 Tax=... [more]
A0A835ZDF8_9STRA9.560e-753.33BUB1 N-terminal domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.430coord: 5..52
e-value: 6.6E-10
score: 40.9
IPR013212Mad3/Bub1 homology region 1PFAMPF08311Mad3_BUB1_Icoord: 8..51
e-value: 6.8E-9
score: 35.8
IPR013212Mad3/Bub1 homology region 1PROSITEPS51489BUB1_Ncoord: 1..52
score: 13.981

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57803contigEcto-sp13_S_contig57803:7..165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57803.16215.1mRNA_Ecto-sp13_S_contig57803.16215.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57803 7..165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57803.16215.1 ID=prot_Ecto-sp13_S_contig57803.16215.1|Name=mRNA_Ecto-sp13_S_contig57803.16215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
RFHGYSQATHLSNAEDLFKFLYKKGIGGKHAHFWVGWALYAENAGNYPMA
EK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013212Mad3/Bub1_I