prot_Ecto-sp13_S_contig5772.16197.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5772.16197.1
Unique Nameprot_Ecto-sp13_S_contig5772.16197.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length318
Homology
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A6H5L686_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L686_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 5.770e-94
Identity = 279/320 (87.19%), Postives = 283/320 (88.44%), Query Frame = 0
Query:    1 MTAAPSSSPSWSSSSRTPSPSFRQGHEQQHFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LQSGSKSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDPTAXXXXXXXXXQCLPAIVPAXXXXXXXXXXXXXXXXXXXXXIAAAKAEDVNEEKLARADAVAALGMLFTQGPSGRADAAAAAASSYPGAADGR 317
            MTA+PSSSPSWSSSSRTPSP FRQGHEQQHFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LQSGSK KGLGKWDEEA+ARASGS GKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXX   KIDPTA  XXXXX      A VPA     XXXXXXXXX        AA KAEDVN+E LARADAVAALGMLF+QGPSGRA AAA AASS P AADGR
Sbjct:  488 MTASPSSSPSWSSSSRTPSPFFRQGHEQQHFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHLQSGSKFKGLGKWDEEARARASGSEGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXXDDAKIDPTAMQXXXXXHFA---ASVPAQAEAEXXXXXXXXXEVATNTT-AAVKAEDVNKENLARADAVAALGMLFSQGPSGRAAAAAVAASSNPEAADGR 803          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: D7FHQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ3_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 4.630e-90
Identity = 230/318 (72.33%), Postives = 233/318 (73.27%), Query Frame = 0
Query:    1 MTAAPSSSPSWSSSSRTPSPSFRQGHEQQHFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSGSKSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDPTAXXXXXXXXXQCLPAIVPAXXXXXXXXXXXXXXXXXXXXXIAAAKAEDVNEEKLARADAVAALGMLFTQGPSGRADAAAAA-ASSYPGAADGR 317
            MTAAPSSSPSWSSSSRTPSPSFR                                                                  GSKSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAW+YISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDP AXXXXXXX     PA   + XXXXXXXXXXXXXXXXXX   AAAKAEDVNEEKLARADAVAALGMLF+QGPSGR  AAA   ASSYPGAADGR
Sbjct:    1 MTAAPSSSPSWSSSSRTPSPSFR------------------------------------------------------------------GSKSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWSYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDPAAXXXXXXXY---FPA---SAXXXXXXXXXXXXXXXXXXNTTAAAKAEDVNEEKLARADAVAALGMLFSQGPSGRVAAAAXXXASSYPGAADGR 246          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A896WCD8_MELAB (MYB family transcription factor n=1 Tax=Melilotus albus TaxID=47082 RepID=A0A896WCD8_MELAB)

HSP 1 Score: 87.4 bits (215), Expect = 2.060e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   95 GLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQR 181
            GLGKW + AQ +  G +GKQ  +R+L HL P   ++ WS +EE++L +A  E GN W+ I  +LPGR+EN++KNHW    R    +R
Sbjct:   38 GLGKWSDIAQ-KLHGRMGKQCRERWLNHLRPDIKKDTWSEEEEKILMKAHGEIGNKWSKIVKMLPGRTENSIKNHWNATKRRQYSKR 123          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR)

HSP 1 Score: 81.6 bits (200), Expect = 1.100e-15
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   92 KSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMR 175
            K  G  KW   AQ    G +GKQ  +R+  HL P  ++  W+ +E+ ++++A K+YGN W  I+ LLPGR++NA+KNHW + MR
Sbjct:   21 KKYGAKKWSLIAQ-HLPGRIGKQCRERWHNHLNPDINKGPWTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHWNSTMR 103          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A7S0JKB2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKB2_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 1.410e-15
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 0
Query:   95 GLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSS 187
            G  KW   A A+  G +GKQ  +R+  HL P   ++ WS +E++V+  A ++ GN W  I+ LLPGR++NA+KNHW + ++  + QR ++  S
Sbjct:   16 GAKKWSTIA-AKLHGRIGKQCRERWHNHLNPDICKDAWSKEEDDVIMAAHRQIGNKWAEIAKLLPGRTDNAIKNHWNSSIKRRVEQRDDDAES 107          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: F0XZ12_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ12_AURAN)

HSP 1 Score: 80.1 bits (196), Expect = 4.900e-15
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  112 GKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMR 175
            GKQ   R+L HL P   RE WS  EE V++ AQ+  GN W  I+ LLPGR++NA+KNHWY+ MR
Sbjct:   55 GKQCRTRWLNHLDPGIKREPWSEHEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMR 118          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A498J124_MALDO (Uncharacterized protein n=4 Tax=Maleae TaxID=721813 RepID=A0A498J124_MALDO)

HSP 1 Score: 85.9 bits (211), Expect = 5.990e-15
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   95 GLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSS 188
            G+ KW + A  + SG VGKQ  +R+  HL P   +E+WS +E+++L  A KE GN W+ I+ +LPGR+EN +KNHW    R    +R +N   S
Sbjct:  264 GIKKWSQIA-TQLSGRVGKQCRERWHNHLRPDIRKEMWSEEEDKILIEAHKEIGNRWSEIAKMLPGRTENTIKNHWNATKRKQNSKRKSNKQDS 356          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A7S1TW44_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW44_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 8.730e-15
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:   92 KSKGLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQR 181
            K KG+  W + A A   G +GKQ  +R++ HL P   +  W+ +E+ VL R QKE+GN+W  IS L+ GRS+N VKN WY+ +R   G+R
Sbjct: 1221 KEKGIASWSDIA-AHVPGRMGKQCRERWVNHLNPSLKKTAWTPEEDAVLLRLQKEHGNSWTKISKLIDGRSDNDVKNRWYSTLRGRGGKR 1309          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A3Q1GG84_9TELE (Transcriptional activator Myb-like n=2 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GG84_9TELE)

HSP 1 Score: 82.0 bits (201), Expect = 8.790e-15
Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   95 GLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSK 189
            G  +W   A+    G +GKQ  +R+  HL P+  +  W+ +E++++++A ++ GN W  I+ LLPGR++NA+KNHW + MR  + Q G   +SSK
Sbjct:  111 GAKRWSVIAK-HLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDQIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQNSSK 204          
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Match: A0A7S4RI16_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RI16_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 9.490e-15
Identity = 37/77 (48.05%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   95 GLGKWDEEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWY 171
            G+ KW E A+ +  G +G Q+ +R++ +L P+  R  WS +E ++L +AQ +YGN W+ IS LLPGRSEN+VKN WY
Sbjct:   84 GMTKWSEIAK-QLPGRIGDQVKERWVNNLNPETKRGTWSLEEIDILHQAQAKYGNKWSMISKLLPGRSENSVKNRWY 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5772.16197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L686_9PHAE5.770e-9487.19MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHQ3_ECTSI4.630e-9072.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A896WCD8_MELAB2.060e-1644.83MYB family transcription factor n=1 Tax=Melilotus ... [more]
D2UY60_NAEGR1.100e-1542.86Predicted protein (Fragment) n=1 Tax=Naegleria gru... [more]
A0A7S0JKB2_9EUKA1.410e-1538.71Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
F0XZ12_AURAN4.900e-1554.69Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A498J124_MALDO5.990e-1542.55Uncharacterized protein n=4 Tax=Maleae TaxID=72181... [more]
A0A7S1TW44_9STRA8.730e-1544.44Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A3Q1GG84_9TELE8.790e-1537.89Transcriptional activator Myb-like n=2 Tax=Acantho... [more]
A0A7S4RI16_9STRA9.490e-1548.05Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 128..176
e-value: 1.0E-9
score: 48.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 129..172
e-value: 8.1E-11
score: 41.9
NoneNo IPR availableGENE3D1.10.10.60coord: 131..203
e-value: 4.8E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 97..240
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 97..240
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 124..178
score: 15.303
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 112..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5772contigEcto-sp13_S_contig5772:2958..4673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5772.16197.1mRNA_Ecto-sp13_S_contig5772.16197.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5772 1..6453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5772.16197.1 ID=prot_Ecto-sp13_S_contig5772.16197.1|Name=mRNA_Ecto-sp13_S_contig5772.16197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
MTAAPSSSPSWSSSSRTPSPSFRQGHEQQHFARQQQQQQSYQRAAAPIST
SSPSPSWRRRSWNPPVVADDGRAAAAPSAAGGGGHHLQSGSKSKGLGKWD
EEAQARASGSVGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNA
WNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCPPSSSRGAA
AKTLGNKSSSWQQRRRSDDAKIDPTAMQQQQQQQQQCLPAIVPAPAEAEA
AVATAATAAVATNTTIAAAKAEDVNEEKLARADAVAALGMLFTQGPSGRA
DAAAAAASSYPGAADGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf