prot_Ecto-sp13_S_contig57567.16173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57567.16173.1
Unique Nameprot_Ecto-sp13_S_contig57567.16173.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.520e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGLVEQIAASDDLGRNI 64
            LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTV+DELVTALGKGGLVEQIAASDDLGRNI
Sbjct:   81 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVYDELVTALGKGGLVEQIAASDDLGRNI 144          
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 5.430e-32
Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 0
Query:    1 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGLVEQIAASDDLGRNI 64
            LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFK V DELVTALGKGGLVEQIAASDDLGRNI
Sbjct:   72 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKAVFDELVTALGKGGLVEQIAASDDLGRNI 135          
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.480e-21
Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    1 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGLVEQIAASDDLGRNI 64
            LG   LVKQLRA DING PLLFLA SSRSSENCF+TVHD L   LG+GGLVEQ+AA D +GR +
Sbjct:   97 LGFNALVKQLRARDINGAPLLFLAASSRSSENCFQTVHDALSAVLGRGGLVEQVAARDGMGRTV 160          
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 4.160e-12
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    1 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGLVEQIAASDDLGRNI 64
            +GV  L K+LR  DI+  PLLF A +SR  ++CF+T HD +  ALGKGGL+EQ+ A D  GR +
Sbjct:   89 MGVRALAKELRELDIDRAPLLFNAAASRGEKSCFRTAHDLVYKALGKGGLLEQLGAVDGEGRTM 152          
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 5.610e-12
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGLVEQIAASDDLGRNI 64
            +GV  L K+LR  DI+  PLLF A +SR   +CF+T HD +  ALGKGGL+EQ+ A D  GR +
Sbjct:   97 IGVRALAKELRELDIDRAPLLFNAAASRGETSCFRTAHDLVYKALGKGGLIEQLEAVDGEGRTM 160          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57567.16173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JB40_9PHAE4.520e-3398.44Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FX79_ECTSI5.430e-3296.88Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FNX3_ECTSI3.480e-2171.88Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LH97_ECTSI4.160e-1251.56Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JNN7_9PHAE5.610e-1251.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57567contigEcto-sp13_S_contig57567:8..471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57567.16173.1mRNA_Ecto-sp13_S_contig57567.16173.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57567 6..471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57567.16173.1 ID=prot_Ecto-sp13_S_contig57567.16173.1|Name=mRNA_Ecto-sp13_S_contig57567.16173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
LGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVHDELVTALGKGGL
VEQIAASDDLGRNI
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