prot_Ecto-sp13_S_contig57530.16169.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57530.16169.1
Unique Nameprot_Ecto-sp13_S_contig57530.16169.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57530.16169.1 vs. uniprot
Match: D7FYL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.250e-62
Identity = 108/124 (87.10%), Postives = 112/124 (90.32%), Query Frame = 0 
Query:    1 STSNRSEQQSALLGSRRKGISSQRRRYPDRDSSTKELIAGGGHDLSRIEKSRALQKARVSWDNVFMTKADQSAETVSGHRSSSGLNKSHARAIEKPIFRHVPHLSPPGTSGLDKKVTKSASLSV 124
            STSNRSEQQSALLGSRR+GISSQRRR+PDRDSSTKELIAGGGHDL R E SRALQKARVSWDNVFMTKADQSAETVS HR+SSGLNKS+AR IEKPI RHVPH SPPG SGLD K TKSAS  V
Sbjct:  245 STSNRSEQQSALLGSRRRGISSQRRRHPDRDSSTKELIAGGGHDLCRKENSRALQKARVSWDNVFMTKADQSAETVSDHRNSSGLNKSNAREIEKPIVRHVPHSSPPGMSGLDNKFTKSASFIV 368
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BLAST of mRNA_Ecto-sp13_S_contig57530.16169.1 vs. uniprot
Match: A0A6H5JZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF3_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.910e-54
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0 
Query:    1 STSNRSEQQSALLGSRRKGISSQRRRYPDRDSSTKELIAGGGHDLSRIEKSRALQKARVSWDNVFMTKADQSAETVSGHRSSSGLNKSHARAIEKPIFRHVPHLSPP 107
            STSNRSEQQSALLGSRRKGISSQRRR+PDRDSSTKEL+AGGGHDL R E SRALQKARVSWDNVFMTK DQSAETVS HRS+SGLNKS+AR IEKPIFRHV H SPP
Sbjct:  192 STSNRSEQQSALLGSRRKGISSQRRRHPDRDSSTKELVAGGGHDLCRKENSRALQKARVSWDNVFMTKEDQSAETVSDHRSNSGLNKSNAREIEKPIFRHVSHSSPP 298
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57530.16169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYL7_ECTSI1.250e-6287.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZF3_9PHAE3.910e-5488.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57530contigEcto-sp13_S_contig57530:476..877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57530.16169.1mRNA_Ecto-sp13_S_contig57530.16169.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57530 474..877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57530.16169.1 ID=prot_Ecto-sp13_S_contig57530.16169.1|Name=mRNA_Ecto-sp13_S_contig57530.16169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
STSNRSEQQSALLGSRRKGISSQRRRYPDRDSSTKELIAGGGHDLSRIEK
SRALQKARVSWDNVFMTKADQSAETVSGHRSSSGLNKSHARAIEKPIFRH
VPHLSPPGTSGLDKKVTKSASLSVRTYCFVGARN
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