mRNA_Ecto-sp13_S_contig5737.16144.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5737.16144.1
Unique NamemRNA_Ecto-sp13_S_contig5737.16144.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A6H5JWA5_9PHAE (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA5_9PHAE)

HSP 1 Score: 593 bits (1529), Expect = 1.830e-210
Identity = 304/344 (88.37%), Postives = 315/344 (91.57%), Query Frame = 2 
Query:    8 EAMRKEGQEIPVAGTNYKDLPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQKPEKPDETSTESDRNSPDLGVAGKEGERAAGADPGGESKEGLTTAGDNNXXXXXXXXXXXXXXXXXXGEIGVKRVLDDGFRDETSSSGLDAKRRNSQSTG 1039
            EAMRKEGQEIPVAG NYK+LPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMT+D+RCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKK+DLYGAHSKVLATNHVFDILVRAMGNGG+LE VEKKALPPRKRANWTGGDDRGPSSMPIRKQK EKPDETS ESDRNSP+L VAGKEGERAAG DPGGESKEG TTAGDNN                  G+ GVKRVLDDG R+ET SSG++AKRRN+QS G
Sbjct:  132 EAMRKEGQEIPVAGKNYKELPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTSDARCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKKDLYGAHSKVLATNHVFDILVRAMGNGGNLETVEKKALPPRKRANWTGGDDRGPSSMPIRKQKSEKPDETSAESDRNSPELRVAGKEGERAAGTDPGGESKEGSTTAGDNNEKFGEGGEKVDEGDEAETGKTGVKRVLDDGCREETCSSGMNAKRRNAQSAG 475
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: D8LL56_ECTSI (Similar to RNA (Guanine-9-) methyltransferase domain containing 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL56_ECTSI)

HSP 1 Score: 543 bits (1400), Expect = 1.840e-193
Identity = 281/310 (90.65%), Postives = 284/310 (91.61%), Query Frame = 2 
Query:  116 MEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQKPEKPDETSTESDRNSPDLGVAGKEGERAAGADPGGESKEGLTTAGDNNXXXXXXXXXXXXXXXXXXGEIGVKRVLDDGFRDETSSSGLDAKRRNSQSTGSE 1045
            MEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGP+MTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQK EKPDETS ESDRNSP+LGVAGKEGERAAGADPGGESKEG TTAGDNN                   E GVKRVLDDG R+ETSSSGLDAKRRNSQS G E
Sbjct:    1 MEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPIMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQKSEKPDETSAESDRNSPELGVAGKEGERAAGADPGGESKEGSTTAGDNNEKSGEGGEKVDAGVEEEKIETGVKRVLDDGCREETSSSGLDAKRRNSQSAGPE 310
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A2D4BSW4_PYTIN (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSW4_PYTIN)

HSP 1 Score: 163 bits (413), Expect = 1.960e-44
Identity = 82/198 (41.41%), Postives = 123/198 (62.12%), Query Frame = 2 
Query:   86 VSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRK 679
            + ++ R   + E   ++ E G ++ ID  F++LM+EK + SL QQ++++YG NR++  P R T++ +       + K+ GF+ WL     S+ Y ++F KE L+YL+ADSP TIT L++ KVYI+GG+VDRN  KG  Y+KA +Q I T +LPL K    G+ ++VL  NHVF+ILVR  G   D +      LP RK
Sbjct:   88 LKRKERQIAKREAFMMATEEGLQIVIDCGFEELMVEKEKKSLSQQIMFSYGVNRRSPAPVRATITSLSGDTRDNLTKISGFNEWLAFKATSKGYMDVFKKESLVYLTADSPNTITELDRDKVYIIGGIVDRNRLKGATYKKAVEQGIATAKLPLDKFLEMGSSTRVLTVNHVFEILVR-FGESSDWKHATMTVLPSRK 284
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A8K1CUE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUE3_PYTOL)

HSP 1 Score: 157 bits (398), Expect = 1.520e-42
Identity = 83/198 (41.92%), Postives = 119/198 (60.10%), Query Frame = 2 
Query:   86 VSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRK 679
            + +R R   + E   ++ E G ++ ID  F++ M EK + SL QQ++++YG NR++A P R T++ +       + K+ GF+ WL   +    Y E+F KE L+YL+ADSP TIT L+K KVYI+GG+VDRN  KG  Y KA +Q I T +LPL +    GA ++VL  NHVF+ILVR      D +      LP RK
Sbjct:   60 LRRRERAIAKRESYLMASEEGLQIVIDCGFEEAMSEKEKKSLSQQIMFSYGVNRRSAAPLRATITSLRGDTKDNLTKISGFNEWLAFKSTELSYMELFRKEALVYLTADSPNTITELDKDKVYIIGGIVDRNRLKGATYNKALEQGIATAKLPLDQHVDMGASTRVLTVNHVFEILVR-YSETKDWKGAAMSTLPSRK 256
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: K3WPP4_GLOUD (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPP4_GLOUD)

HSP 1 Score: 153 bits (387), Expect = 1.910e-40
Identity = 80/200 (40.00%), Postives = 119/200 (59.50%), Query Frame = 2 
Query:   86 VSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRA 685
            + +R R   + E   ++ E G +V ID  F+D M  +A+ SL QQ++Y+YG NR++  P    ++ +       + K+ GF  W+   +  RCY ++F KE L+YL+ADSP TIT L + KVYI+GG+VDRN  KG+ Y+KA++Q I T +LPL +    G  ++VL  NHVF+ILV+      D  +     LP RK A
Sbjct:  102 LRRRERTLAKRETFLMAAEEGIKVVIDCGFEDEMESRAKKSLSQQIMYSYGVNRRSDSPATTYITSLTGETKDNLVKIGGFPEWMAFKSTPRCYIDLFKKESLVYLTADSPNTITKLSRDKVYIIGGIVDRNRLKGITYKKAQEQGIETAKLPLDQVVEMGGATRVLTVNHVFEILVQ-FAEKNDWAQAALSTLPSRKNA 300
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A0P1AEM9_PLAHL (Rna (Guanine-9-)-methyltransferase domain-containing n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEM9_PLAHL)

HSP 1 Score: 152 bits (383), Expect = 4.690e-40
Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 2 
Query:   86 VSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDIL 613
            + +R RN  + E   ++ E G +V ID AFDD M EK + SL QQ++++YG NR+++ P  V ++ +   +   + K+ GF  W      S  Y +IF KE L+YL+ADSP TIT L + KVYI+GG+VDRN  KG+ YEKA KQ I T +LPL      G+ ++VL  NHVF+IL
Sbjct:   83 LRRRERNIAKRETLLMAAEEGSKVVIDCAFDDKMSEKEKKSLSQQIMFSYGVNRRSSMPMNVYITSLHGDVRKNLEKISGFHEWQTFAESSLSYMDIFKKESLVYLTADSPNTITKLCRDKVYIIGGIVDRNRLKGITYEKAIKQGIETAKLPLDAVVDMGSATRVLTVNHVFEIL 258
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BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: F0WGA4_9STRA (RNA (Guanine9)methyltransferase domaincontaining protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGA4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.930e-40
Identity = 85/221 (38.46%), Postives = 127/221 (57.47%), Query Frame = 2 
Query:   17 RKEGQEIPVAGTNYKDLPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRK 679
            R+  + IPV      D+  E     +  + A+R  F     EG ++V ID  F+DL+ +K + SL QQ++++YG NR++  P  V L+ +  +    +N + GFD W      + CYT  F +E L+YL+ADSP  ++ L + KVY++GG+VDRN  KG  Y+KA  Q I T RLPL++    G++++VL  NHVF ILV       D ++   KALP RK
Sbjct:   44 RRSNETIPVV----LDMSDEMVLYRREKQLARRERFSMALAEG-HQVVIDCGFEDLLTDKERKSLAQQIMFSYGVNRRSETPLSVMLTSLRGMTLDALNNITGFDAWQSFHPSTECYTIKFKEEALVYLTADSPNVLSTLSRDKVYVIGGIVDRNRLKGATYKKASTQNIATARLPLQEVVDMGSYTRVLTVNHVFAILVY-FAQLRDWKEAALKALPSRK 258
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A067BJ29_SAPPC (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BJ29_SAPPC)

HSP 1 Score: 150 bits (379), Expect = 1.480e-39
Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 2 
Query:  107 AKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGD 703
            AKR  F   + EG   + ID  F++ M  K + SL QQ++++YG N+++  P  V ++ +     A + K+ GF+ WL  +T  +CY ++F KE L+YL+ADSP  I  L+  KVYI+GG+VDRN  KG+ YEKA  Q I T +LPL K    G  ++VL  NHVF ILV       D  +    ALP RK A    G+
Sbjct:   83 AKRESFLMAASEGP-TIVIDCGFEEAMSSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVFRKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVLEMGQATRVLTVNHVFQILVNYR-TAQDWTQATLSALPARKGAQVKSGE 279
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: A0A6G0WDF1_9STRA (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDF1_9STRA)

HSP 1 Score: 149 bits (375), Expect = 8.820e-39
Identity = 79/200 (39.50%), Postives = 117/200 (58.50%), Query Frame = 2 
Query:   86 VSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRA 685
            + ++ R+  + E   +    G  + ID  FD+ M  +   SL QQV+++YG N+++  P  V L+ +   + + +  + GF TWLG T  ++ Y ++F K+ L+YL+ADSP  IT L+  KVYI+GG+VDRN  KG  YEKA++Q I T +LPL +    G  ++VL  NHVF ILV  M    D  +    ALP RK A
Sbjct:   94 LMRKERSIMKRESFLMRVNEGASIVIDCGFDNAMTSREMKSLSQQVMFSYGANKRSESPASVFLTSLRGELESNMRNIAGFSTWLGFTATAQSYMDVFHKDRLVYLTADSPNVITDLDVNKVYIIGGIVDRNRLKGATYEKAQQQGIATAKLPLDQVLEMGQSTRVLTVNHVFQILVNYM-TVRDWTQATLSALPGRKGA 292
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Match: V9EWT5_PHYPR (SAM-dependent MTase TRM10-type domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=V9EWT5_PHYPR)

HSP 1 Score: 147 bits (372), Expect = 1.940e-38
Identity = 84/211 (39.81%), Postives = 122/211 (57.82%), Query Frame = 2 
Query:   59 KDLPQEQWSVSQRIRNA-KRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRAN 688
            K+L   + +V +R   A  R E   ++ E G +V ID  F++ M EK + SL QQ++++YG NRK+  P    ++ +   +   + K+ GF  W   T  S  Y ++F KE L+YL+ADSP TIT L + KVYI+GG+VDRN  KG+ YEKA +Q I T +LPL      G+ ++VL  NHVF+IL +      D  +     LP RK A+
Sbjct:   73 KELDMSEEAVQRRKDRAIARREAYLMAAEEGVKVVIDCEFEEEMNEKEKKSLSQQIMFSYGVNRKSRTPMNAYITSLHGDIRKNLEKISGFHEWQAFTGTSNSYMDLFKKESLVYLTADSPNTITKLSRDKVYIIGGIVDRNRLKGITYEKAVEQGIETAKLPLDTVVEMGSATRVLTVNHVFEILAQ-FSEIKDWAQATLSTLPSRKGAH 282
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5737.16144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWA5_9PHAE1.830e-21088.37SAM-dependent MTase TRM10-type domain-containing p... [more]
D8LL56_ECTSI1.840e-19390.65Similar to RNA (Guanine-9-) methyltransferase doma... [more]
A0A2D4BSW4_PYTIN1.960e-4441.41SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A8K1CUE3_PYTOL1.520e-4241.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WPP4_GLOUD1.910e-4040.00SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A0P1AEM9_PLAHL4.690e-4044.89Rna (Guanine-9-)-methyltransferase domain-containi... [more]
F0WGA4_9STRA6.930e-4038.46RNA (Guanine9)methyltransferase domaincontaining p... [more]
A0A067BJ29_SAPPC1.480e-3941.21SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A6G0WDF1_9STRA8.820e-3939.50SAM-dependent MTase TRM10-type domain-containing p... [more]
V9EWT5_PHYPR1.940e-3839.81SAM-dependent MTase TRM10-type domain-containing p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5737contigEcto-sp13_S_contig5737:5280..8526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score550.1
Seed ortholog evalue7.6e-154
Seed eggNOG ortholog2880.D8LL56
Model size1048
KEGG koko:K15445
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.tRNA (guanine(9)-N(1))-methyltransferase activity
EggNOG OGsKOG2967@1,KOG2967@2759
EC2.1.1.221
Cds size1035
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5737.16144.1prot_Ecto-sp13_S_contig5737.16144.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5737 5280..8513 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463794.6450934-CDS-Ecto-sp13_S_contig5737:5279..57471681463794.6450934-CDS-Ecto-sp13_S_contig5737:5279..5747Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5737 5280..5747 -
1681463794.6589887-CDS-Ecto-sp13_S_contig5737:6439..65051681463794.6589887-CDS-Ecto-sp13_S_contig5737:6439..6505Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5737 6440..6505 -
1681463794.6711369-CDS-Ecto-sp13_S_contig5737:7097..72251681463794.6711369-CDS-Ecto-sp13_S_contig5737:7097..7225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5737 7098..7225 -
1681463794.742814-CDS-Ecto-sp13_S_contig5737:7375..75411681463794.742814-CDS-Ecto-sp13_S_contig5737:7375..7541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5737 7376..7541 -
1681463794.793397-CDS-Ecto-sp13_S_contig5737:8306..85131681463794.793397-CDS-Ecto-sp13_S_contig5737:8306..8513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5737 8307..8513 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463794.8108106-UTR-Ecto-sp13_S_contig5737:8513..85261681463794.8108106-UTR-Ecto-sp13_S_contig5737:8513..8526Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5737 8514..8526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5737.16144.1

>prot_Ecto-sp13_S_contig5737.16144.1 ID=prot_Ecto-sp13_S_contig5737.16144.1|Name=mRNA_Ecto-sp13_S_contig5737.16144.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp
MRKEGQEIPVAGTNYKDLPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCI
DMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVN
KLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVG
GLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDIL
VRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQKPEKPDET
STESDRNSPDLGVAGKEGERAAGADPGGESKEGLTTAGDNNEKSGEEGEK
VDEGDEEEKGEIGVKRVLDDGFRDETSSSGLDAKRRNSQSTGSE*
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mRNA from alignment at Ecto-sp13_S_contig5737:5280..8526-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5737.16144.1 ID=mRNA_Ecto-sp13_S_contig5737.16144.1|Name=mRNA_Ecto-sp13_S_contig5737.16144.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3247bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5737:5280..8526- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGGAGGAAGCGATGCGCAAAGAGGGACAGGAAATCCCGGTGGCGGGAA
CGAACTACAAGGACCTCCCTCAAGAGCAGTGGTCCGTCAGTCAGCGAATT
CGAAACGCGAAGCGGATGGAGTTCGAAACGTTGTCCAAGGAGGGCGGCTA
CCGCGTGTGCATCGACATGGCGTTCGACGACCTCATGCTGGAGAAGGCGC
AAGCTAGCTTAGTGCAGCAGGTGACCAACTTCTCGTGAGTCTGCACTGCA
GTAGATCCCTTTGTTTCCCCGCCCTCATTATGTGAACCCCCCTCCTGCCC
TAAGTTCGGTCGGCAATCGTCAAAACTATGAACCCACGGCGGAAGGCCAA
AGATAAAATAATCTCCTCTCTCGTATTTCTCTCTCCCGATGGAGGCAATT
ATTTTTTCCGATGAGGTCCGCCCGCGGTATTTTGTTTTAGCATCGCTCTT
GACGATTTTTCATCCCGCATCGCCATACCTCAGCAGCAGTGTTTAGCGCG
GCTTTGACTTTTTTCGTAGGACGTGCGCTCGAAGGGCGATTCATCCGTCG
AGGCGTGAACGGCGCTGGCGGAGATGCTTCCTAACCCGTTATAACCAATG
GGGGATCGGCATGGCCGGAATCCCCACGTGCTGTCATTTTTCGTCCCAGC
TCTTGCTCGTATATTCTTACAAGCCTTGTCCATCGCGGGTTCGGCGAGGT
CTATAAATATACATCGCGTGTATGTGCAAGGCATTTTATTTGCGGGCTCC
ACCAGGGTAACTCCCTCCCCGAGTGGATAATGTCAAAGCTGCACATTACC
CCATCTGCGACAGCTTCTTGCCTGGATGGTTCAACTCAATCAAATACCTT
AGCAAGACCCATACTCTAGGGGGGAGGGGGAACCACTAGGATGGCGACGT
TCACGACATTATGACGGCAGCCTGACCTGTTTTTTTTATCTACCGCCTTA
TTCCCGCGTTTGATGGATGGATCGAAATCTTTTAGGTGCTTTACGCGTAC
GGCACGAATCGGAAGGCTGCTCAGCCGTGTCGTGTGACGTTGAGCGGGAT
GGGACCGGTCATGACCGCGAAGGTCAACAAGCTGCAAGGCTTCGACACGT
GGCTTGGGATGACCACTGACTCGCGCTGTTACACCGAGATCTTCGACAAA
GGTAGGACACAAGAGCACATGCGCGTAGATTAGATGAAGGCACGACGATT
TCGGCACCTTTTCCTCACGCCAACTAGCCAAGTTCACCTCACCCCGTTCC
GACCGCGCGCATGCTGATGCCGTTCGTCGCCCCGGATGTGTTCCGCCGCA
GAGGAGCTGATATACCTGAGCGCCGATTCGCCAGCCACCATCACCCATTT
AGAAAAGGGTAAGGTGTACATCGTGGGGGGTCTGGTCGACAGGAATGCGC
ACAAGGGGCTGTGCTACGAGAAGGCCAAGGTAAGGTAGAACCCCGCAACG
TACGTCGCGTGCTTGCAAGTCGCCGCCGTCGTGTTCATCGTTTCAAGAAC
TCTGCTTCCTTTCCATCGCCGACGCACACACGATACAGACGCATTGTACG
CTTTCCGCTCACGTCTGTTGCACACGGTCTGGGCGTGTCCAAGTTCACAA
GTCGTCCTCGCCAAGTCGGCAGGCCATGCTTTTGCCGTAACATACCGCAC
TATTGATACGTCGTGAAGCACACAAGCTATTGACCAATGCGCGCGTGTTC
AAGAAACTGCCGTCCACCGCACCACCGATGTACGTTAATTGTGCGGAATC
GTTCGCCGCATTTCGAGCATAGGTTGCGCAGTTTCCTGGCATCGCATGCT
TACAGATTCTCGCCCGTGGCTGCGTGAACAAATGTCCTGACGAGAGATGT
TTGTCGCTGTACCCTCATCCATACCTCACGGTTTTTGGGGCAATGATCTG
ACCTTCGAACTAACTCAAAATTGTTGTAAACGCGTTCTTCTCTCGTCCCT
AACCGTACTGATGATTATCCTGTTCGGCTCGGCTCGTTTTTGCCCTCTCG
GTGAATGACTCGTATTTGCAGAAACAAGAGATCGTGACGGGCAGACTCCC
TCTCAAGAAGGAAGACTTGTATGGAGCTCACAGCAAGGTGGGCCAGGGAA
GTTCTGCCAGCAGGCTGTATTCATCGCTCTCCGCACGCCCACCTTGTAAC
TACTATTTGCGTTGCCGTGGTGTTTTCGTCGTTTCGTGTCTGTTTATCAT
CAGTCTACGTGCCGAAAAGCAATGTGGCGTGCCTGGCAATTGTATGTGTT
CGGGGGAAATTCTGCTCATGACAGTTTTGACATTGGTTGGGGAGTTTTGC
CTCCCCCTTCCTGGTTAATGGACCACCTCTGACAAAAGCGCTGCTTCCTT
GGGAAATAAGGAATCATACCATTCTAGAAGATGCATCTCCGACAGAACGA
TATGGCTGAAATACTTGTTCTCGCTCGCTGATACTTCGAAGTACTATTTA
AATTTTACTGTTTGGATCCCGTTGCTCAGACGAAGATGGCAGCTTCAGAA
TGTCCTGGGACTCCTTGTTCTTTCTGCCCACAGCAGCCATGGTGTGTGAT
TGTTCGTTGTTTACAGACCTCTCTGAAGCCACTCGTTTGTCGTCATGGTC
CGTACCATACGCGACAGGATCCGCGTAGACTAAGCGCAGAAGACAGGGGA
CAGAAGTACCGCGCCCCGATTCACGTCTAAGGACCACGCTCGTCACGACA
GCAAATGCCGGGATTGTGTCGAGGTTTTGTCCCCTGAGGACAAACGCCGC
CTTTATCTACGTTCGTGCTCTTTGGTCAGGTCCTAGCAACAAATCACGTG
TTCGACATCCTAGTCCGGGCGATGGGAAACGGGGGCGACCTTGAGAAGGT
TGAGAAGAAGGCGCTACCTCCCCGCAAGCGTGCGAACTGGACAGGCGGGG
ATGACAGAGGCCCCTCCAGCATGCCTATCCGCAAACAGAAACCGGAGAAA
CCCGACGAAACGTCTACGGAATCCGACCGCAACAGTCCGGACTTGGGAGT
AGCAGGAAAGGAGGGAGAACGGGCAGCAGGGGCAGACCCTGGTGGTGAGA
GTAAGGAGGGGTTGACAACAGCCGGAGATAACAACGAGAAGAGCGGGGAG
GAGGGCGAGAAGGTGGACGAGGGGGATGAAGAGGAGAAGGGTGAAATTGG
GGTGAAACGGGTGCTAGACGACGGGTTTAGGGACGAGACATCCTCCTCTG
GTTTGGACGCTAAGCGCAGGAATTCGCAGTCCACAGGTTCAGAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5737:5280..8526-

>mRNA_Ecto-sp13_S_contig5737.16144.1 ID=mRNA_Ecto-sp13_S_contig5737.16144.1|Name=mRNA_Ecto-sp13_S_contig5737.16144.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5737:5280..8526- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCAAAGAGGGACAGGAAATCCCGGTGGCGGGAACGAACTACAAGGA
CCTCCCTCAAGAGCAGTGGTCCGTCAGTCAGCGAATTCGAAACGCGAAGC
GGATGGAGTTCGAAACGTTGTCCAAGGAGGGCGGCTACCGCGTGTGCATC
GACATGGCGTTCGACGACCTCATGCTGGAGAAGGCGCAAGCTAGCTTAGT
GCAGCAGGTGCTTTACGCGTACGGCACGAATCGGAAGGCTGCTCAGCCGT
GTCGTGTGACGTTGAGCGGGATGGGACCGGTCATGACCGCGAAGGTCAAC
AAGCTGCAAGGCTTCGACACGTGGCTTGGGATGACCACTGACTCGCGCTG
TTACACCGAGATCTTCGACAAAGAGGAGCTGATATACCTGAGCGCCGATT
CGCCAGCCACCATCACCCATTTAGAAAAGGGTAAGGTGTACATCGTGGGG
GGTCTGGTCGACAGGAATGCGCACAAGGGGCTGTGCTACGAGAAGGCCAA
GAAACAAGAGATCGTGACGGGCAGACTCCCTCTCAAGAAGGAAGACTTGT
ATGGAGCTCACAGCAAGGTCCTAGCAACAAATCACGTGTTCGACATCCTA
GTCCGGGCGATGGGAAACGGGGGCGACCTTGAGAAGGTTGAGAAGAAGGC
GCTACCTCCCCGCAAGCGTGCGAACTGGACAGGCGGGGATGACAGAGGCC
CCTCCAGCATGCCTATCCGCAAACAGAAACCGGAGAAACCCGACGAAACG
TCTACGGAATCCGACCGCAACAGTCCGGACTTGGGAGTAGCAGGAAAGGA
GGGAGAACGGGCAGCAGGGGCAGACCCTGGTGGTGAGAGTAAGGAGGGGT
TGACAACAGCCGGAGATAACAACGAGAAGAGCGGGGAGGAGGGCGAGAAG
GTGGACGAGGGGGATGAAGAGGAGAAGGGTGAAATTGGGGTGAAACGGGT
GCTAGACGACGGGTTTAGGGACGAGACATCCTCCTCTGGTTTGGACGCTA
AGCGCAGGAATTCGCAGTCCACAGGTTCAGAGTGA
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