prot_Ecto-sp13_S_contig5736.16143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5736.16143.1
Unique Nameprot_Ecto-sp13_S_contig5736.16143.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 5.120e-154
Identity = 261/359 (72.70%), Postives = 264/359 (73.54%), Query Frame = 0
Query:    1 QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAAEGCLLPDSKTAKSPPGFVPGVGXXXXXXXXXTKTPAERAQERVTRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGKYPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIMYAEDLAPQEPRETPVGLGTPPYPDAACDRPRGGVRPLTPGWISDQTAVAVDGTSKDNTGKRGRN------------GGDVGXXXXXXXR---EGCGAGPH 344
            QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAA+G LLPDSKT KS PGF+PGV          TKTPA RAQERVTRAFREQAG                                                    GVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIMYAEDLAPQEP ETPVGLGTPP PDAACDRPRGGVRPLTPGWISD+ A   DGTS DNT KR RN            G   G  XXXXXR   EGCGAGPH
Sbjct:  244 QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAADGFLLPDSKTTKSSPGFIPGVAGEGGWDDDTTKTPAMRAQERVTRAFREQAG----------------------------------------------------GVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIMYAEDLAPQEPLETPVGLGTPPCPDAACDRPRGGVRPLTPGWISDENAATADGTSNDNTDKRERNXXXXXXXXXXNFGNLPGKEXXXXXRSAGEGCGAGPH 550          
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: A0A2D4BW89_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW89_PYTIN)

HSP 1 Score: 70.9 bits (172), Expect = 1.020e-9
Identity = 64/245 (26.12%), Postives = 99/245 (40.41%), Query Frame = 0
Query:   15 TMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAAEGCLLPDSKTAKSPPGFVPGVGXXXXXXXXXTKTPAERAQERVTRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGKYPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIM 259
            T+AE EQ+LR+KI            +AFR   +  G   D  +F  A++T  L L   + +  F+ FD +GSG  D +EF   V             LP   T +    +V              K  A    ER       ++  +  + + K +R+K+  +      T  + Y    +S ++                + +F++ +   G  +T AQ E LFRRYD DGS DID  EF   I+
Sbjct:  505 TIAEIEQMLREKIEQRTSKSSDCFRQAFRIFKKVNGIKPD--EFHAALETIGLALDRSQSDILFQRFDKNGSGDXDLDEFIHGV-------------LPPDYTGQQ---WVAAADEMHREADLRKKYEAVHNPERYMNEVEMESWSL--DEIEKRIRDKIQQSTSKSSDTFRQAYRIFKKSNHI---------------TIDEFRDRLLALGFRLTRAQCEGLFRRYDTDGSNDIDLQEFCMRIL 714          
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: A0A6H5KCV0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV0_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 3.550e-8
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
Query:   52 VVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEE 93
            V+D   FRE VK  +LGL EPE+  FF+ FDADGSGGIDF E
Sbjct:    2 VIDFKGFREGVKKLNLGLTEPEILDFFRSFDADGSGGIDFSE 43          
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: W2QEX6_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2QEX6_PHYPN)

HSP 1 Score: 56.6 bits (135), Expect = 4.340e-5
Identity = 50/212 (23.58%), Postives = 89/212 (41.98%), Query Frame = 0
Query:   48 GRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAAEGCLLPDSKTAKSPPGFVPGVGXXXXXXXXXTKTPAERAQERVTRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGKYPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIM 259
            G+ T +  +D   A+K   L +   +++  F  FD D +G +D  +F             +G +L D+ T+     F   V           K          + A        T   + ++LREK+                   RS +  +   R+ ++++ G++  +F  A+   G+ +T  Q + LFRR+DKDGSGDID +EF+  ++
Sbjct:  340 GKPTGISRSDLNTAMKKLGLSVSNKQLQDLFATFDFDKTGDLDVNKF------------VQGVMLDDNSTS-----FWLSVKDRQKVEDSRRKL--------YSMAVASVQESWTIADIERMLREKIEQRTS--------------RSSDCFRQAFRIFKKVN-GIKPHEFHAALEAIGLALTRVQSDILFRRFDKDGSGDIDLNEFIHGVL 511          
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: A0A0W8CN27_PHYNI (Histidine protein methyltransferase 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CN27_PHYNI)

HSP 1 Score: 56.6 bits (135), Expect = 4.570e-5
Identity = 50/212 (23.58%), Postives = 89/212 (41.98%), Query Frame = 0
Query:   48 GRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAAEGCLLPDSKTAKSPPGFVPGVGXXXXXXXXXTKTPAERAQERVTRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGKYPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIM 259
            G+ T +  +D   A+K   L +   +++  F  FD D +G +D  +F             +G +L D+ T+     F   V           K          + A        T   + ++LREK+                   RS +  +   R+ ++++ G++  +F  A+   G+ +T  Q + LFRR+DKDGSGDID +EF+  ++
Sbjct:  609 GKPTGISRSDLNTAMKKLGLSVSNKQLQDLFATFDFDKTGDLDVNKF------------VQGVMLDDNSTS-----FWLSVKDRQKVEDSRRKL--------YSMAVASVQESWTIADIERMLREKIEQRTS--------------RSSDCFRQAFRIFKKVN-GIKPHEFHAALEAIGLALTRVQSDILFRRFDKDGSGDIDLNEFIHGVL 780          
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Match: A0A8J5J8P2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J8P2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.850e-5
Identity = 51/212 (24.06%), Postives = 88/212 (41.51%), Query Frame = 0
Query:   48 GRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAAEGCLLPDSKTAKSPPGFVPGVGXXXXXXXXXTKTPAERAQERVTRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGKYPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIM 259
            G+ T +   D   A+K   L +   +V+  F  FD D +G +D  +F             +G +L D+ T+     F   V           K          + A        T   + ++LREK+                   RS +  +   R+ ++++ G++  +F  A+   G+ +T  Q + LFRR+DKDGSGDID +EF+  ++
Sbjct:  646 GKPTGISCTDLSTALKKLGLKVSTKQVQDLFATFDFDKTGDLDVNKF------------VQGVMLDDNSTS-----FWLSVKDRQKVEDSRRKL--------YSMAVASVQESWTIADIERMLREKIEQRTS--------------RSSDCFRQAFRIFKKVN-GIKPHEFHAALEAIGLALTRVQSDILFRRFDKDGSGDIDLNEFIHGVL 817          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5736.16143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FWU7_ECTSI5.120e-15472.70EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
A0A2D4BW89_PYTIN1.020e-926.12Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6H5KCV0_9PHAE3.550e-864.29EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
W2QEX6_PHYPN4.340e-523.58Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A0W8CN27_PHYNI4.570e-523.58Histidine protein methyltransferase 1 n=3 Tax=Phyt... [more]
A0A8J5J8P2_9STRA5.850e-524.06Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 37..65
e-value: 30.0
score: 5.9
coord: 73..101
e-value: 3.2E-4
score: 30.0
coord: 233..261
e-value: 9.1E-4
score: 28.5
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 234..258
e-value: 1.3E-6
score: 27.5
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 52..96
e-value: 1.3E-8
score: 34.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 229..264
score: 13.704
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..104
score: 12.617
NoneNo IPR availableGENE3D1.10.238.10coord: 3..105
e-value: 2.3E-13
score: 52.1
NoneNo IPR availableGENE3D1.10.238.10coord: 212..267
e-value: 1.3E-10
score: 43.5
NoneNo IPR availablePANTHERPTHR10891:SF744coord: 21..275
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 21..275
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 242..254
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 37..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5736contigEcto-sp13_S_contig5736:3..8091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5736.16143.1mRNA_Ecto-sp13_S_contig5736.16143.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5736 3..8091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5736.16143.1 ID=prot_Ecto-sp13_S_contig5736.16143.1|Name=mRNA_Ecto-sp13_S_contig5736.16143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRG
TVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGG
TDAAGAAEGCLLPDSKTAKSPPGFVPGVGGGGGGDDDTTKTPAERAQERV
TRAFREQAGKMTSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGK
YPTRLKERLSCGVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDID
FHEFLKLIMYAEDLAPQEPRETPVGLGTPPYPDAACDRPRGGVRPLTPGW
ISDQTAVAVDGTSKDNTGKRGRNGGDVGGGGGGGGREGCGAGPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR039647EF_hand_pair_protein_CML-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair