mRNA_Ecto-sp13_S_contig5712.16103.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE) HSP 1 Score: 581 bits (1498), Expect = 2.640e-205 Identity = 292/301 (97.01%), Postives = 293/301 (97.34%), Query Frame = 1
Query: 133 MPTASMLAETRPPSSRKRPRSRAVQHVSKGAVLLLSLLQLTTARRPGGGGYHYPSVPPQGYDSQDSSFDGGDWGDWRNQPIPGPNPHGMPFSPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 1035
MPTASMLAE RPPSSRKRPRSR VQHVSK AVLLLSLLQLTTARRPGGGGYHYPSV PQGYDSQDSSFDGGDWGDWRNQPIPGP PHGMPFSPPIHRRF QPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPN+CLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGL VAELKHLEHHMLQALAKDAYVSV ELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ
Sbjct: 1 MPTASMLAEFRPPSSRKRPRSRTVQHVSKSAVLLLSLLQLTTARRPGGGGYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVSELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 301
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI) HSP 1 Score: 278 bits (710), Expect = 1.760e-88 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 1
Query: 397 MPFSPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDI 828
MPFSPPIHRRF QPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND+
Sbjct: 1 MPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDM 144
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S2PVE5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVE5_9DINO) HSP 1 Score: 86.3 bits (212), Expect = 3.780e-15 Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 406 SPPIHRRFGQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMG 957
SPP+ R + E D S+A LEE + L +A VL LA+ LG R + S+FH+A P +++ +++ R+A C + CL+L LVY+DRL + V+PL HRL S+++A KF +D+FY + V G+ V EL LE LQ L V E Y+G
Sbjct: 93 SPPVLPR-SEGEFHDPGASIAAMLEEAGQEGLVSALANVLSHLAS-----LGCRAHRASIFHAAQTPQISITDYLTRIARYYHCSDSCLVLGLVYIDRLVKLQPDF--VVSPLNVHRLLATSIMLAAKF--------HDDVFYSNKYYGKVAGVRVCELNRLEEKFLQMLKWHLCVLPDEYEEYLG 262
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF) HSP 1 Score: 73.6 bits (179), Expect = 3.290e-11 Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = 1
Query: 478 EEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRYMGNFAHRHNEMV 987
EE A L G+++++LQ++A N+L G R +K SVFH T P++++ +++R+ C C ++ VY+DR + L + HRL S++++ KF+ + +N+ +Y K V G+ E+ LE L L V+ + Y +H EM+
Sbjct: 6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQKMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLDRFT--HTHPTLKINSFNVHRLLITSVMLSAKFMDDM---YYNNAYYAK---VGGISTREMNILEVDFLFGLGFHLNVTPSTFHSYC---SHLQKEMM 164
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A1Y1XV07_9FUNG (Cyclin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV07_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 2.100e-10 Identity = 46/135 (34.07%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 586 FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY----MGNFAHRHN 978
FHS+T+P++++ ++ R+ ++I N CL++TL+Y+DR+A +S HL++ T HRL S+ +A KF+ ++ S N ++ + V GLPV EL LE +L L + + RE + Y M F +H+
Sbjct: 32 FHSSTVPAISIESYIRRIQSSIHFTNNCLLITLIYLDRIAQSTS--HLHINSYTIHRLLLTSITVANKFLNDE--SSPNSLYAK----VGGLPVRELNSLELELLFMLDFELNIQSREFHTYTHRLMSLFQRKHH 158
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S4PH37_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH37_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 3.310e-9 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 451 ELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 888
+L++L S EE +I + +L + GE R+++ FH+ P +++ ++VERV C C ++ LVY++R+ SS+ ++ P+T HRLF ASL++A K+ + FN+ FY + V G+ EL LE
Sbjct: 2 QLQTLPCSSLEE-------FIDALTTELGELIAFGAGETSRRETKFHALRAPIISLRQYVERVTTYAPCTVECFVVALVYLNRM---SSQKLGFINPMTIHRLFLASLLLAAKYYDDL---YFNNKFYAR---VGGISCKELNALE 131
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S1SBT1_ALECA (Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBT1_ALECA) HSP 1 Score: 65.5 bits (158), Expect = 6.890e-9 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 493 ADLGGYIAVVLQKLANMNELFLGERG---RKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY 951
AD G ++ + L+ G RG +++FH+A P+V V++++ER+ + C CL++ LVY+DR+A +E+ ++ LT HRL ++++A KF + + F++ Y K V G+ +AEL LE Q + +V + Y
Sbjct: 5 ADAGQLVSALAVVLSVHCSRAAGGRGCDSMGRTLFHAAREPAVGVSDYLERIRRRLRCSKECLVMALVYLDRIAEADAEVA--ISNLTVHRLLLTAILVASKF---QDDNGFDNARYAK---VGGIGLAELNALERDFCQRVGWRLHVEPEQYGWY 152
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.670e-8 Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 511 IAVVLQKLANMNELFLGERGRKKSV----FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 888
+ VLQKL ++N+ G S FH++ PS++VAE++ER+ C + CL+L L+Y+DRL S+ +T L HR+ ++++A KF ++ FN+++Y K V G+P E+ LE
Sbjct: 421 LGCVLQKLLDVNKRGESAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ---YFNNLYYAK---VGGVPCKEINALE 541
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: K8YPI9_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YPI9_NANGC) HSP 1 Score: 66.2 bits (160), Expect = 8.660e-8 Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 511 IAVVLQKLANMNELFLGERGRKKSV----FHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLPVAELKHLE 888
+ VLQKL ++N+ G S FH++ PS++VAE++ER+ C + CL+L L+Y+DRL S+ +T L HR+ ++++A KF ++ FN+++Y K V G+P E+ LE
Sbjct: 16 LGCVLQKLLDVNKRGETAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ---YFNNLYYAK---VGGVPCKEINALE 136
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Match: A0A7S1B268_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B268_NOCSC) HSP 1 Score: 62.8 bits (151), Expect = 5.040e-7 Identity = 43/136 (31.62%), Postives = 67/136 (49.26%), Query Frame = 1
Query: 556 LGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELH--LYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIH--SVTGLPVAELKHLEHHMLQALAKDAYVSVRELNRY 951
LG R + FH+ + V++ E++ R+ C + CL+L LVY+DR+ + H V+ L HRL S+++A+KF D+F+ H V GL V+EL LE +Q L +V E + Y
Sbjct: 159 LGCRPHAATCFHAVRLSPVSIQEYLHRIVTWFPCSDECLVLGLVYIDRIV----KWHPGFVVSGLNIHRLLVTSIMLAVKF--------SEDVFFSNAHYAKVAGLSVSELNKLEQRFVQLLHWRLHVLPEEFHHY 282 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5712.16103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5712.16103.1 >prot_Ecto-sp13_S_contig5712.16103.1 ID=prot_Ecto-sp13_S_contig5712.16103.1|Name=mRNA_Ecto-sp13_S_contig5712.16103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp MPTASMLAETRPPSSRKRPRSRAVQHVSKGAVLLLSLLQLTTARRPGGGGback to top mRNA from alignment at Ecto-sp13_S_contig5712:3270..7539- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5712.16103.1 ID=mRNA_Ecto-sp13_S_contig5712.16103.1|Name=mRNA_Ecto-sp13_S_contig5712.16103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5712:3270..7539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5712:3270..7539- >mRNA_Ecto-sp13_S_contig5712.16103.1 ID=mRNA_Ecto-sp13_S_contig5712.16103.1|Name=mRNA_Ecto-sp13_S_contig5712.16103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5712:3270..7539- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |