prot_Ecto-sp13_S_contig57112.16102.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57112.16102.1
Unique Nameprot_Ecto-sp13_S_contig57112.16102.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57112.16102.1 vs. uniprot
Match: D7FPW1_ECTSI (Sulfate permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW1_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 3.900e-33
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0 
Query:    1 AVDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEV 68
            A DLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQE+
Sbjct:  230 AFDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEI 297
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BLAST of mRNA_Ecto-sp13_S_contig57112.16102.1 vs. uniprot
Match: A0A6H5L827_9PHAE (SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L827_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.450e-33
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0 
Query:    1 AVDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEV 68
            A DLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQE+
Sbjct:  105 AFDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEI 172
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57112.16102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPW1_ECTSI3.900e-3397.06Sulfate permease n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5L827_9PHAE7.450e-3397.06SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011547SLC26A/SulP transporter domainPFAMPF00916Sulfate_transpcoord: 5..63
e-value: 1.0E-5
score: 24.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availableTMHMMTMhelixcoord: 40..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57112contigEcto-sp13_S_contig57112:357..563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57112.16102.1mRNA_Ecto-sp13_S_contig57112.16102.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57112 357..563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57112.16102.1 ID=prot_Ecto-sp13_S_contig57112.16102.1|Name=mRNA_Ecto-sp13_S_contig57112.16102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
AVDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALV
SFIITHSIAKSLAGAQEVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011547SLC26A/SulP_dom