prot_Ecto-sp13_S_contig566.16018.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig566.16018.1
Unique Nameprot_Ecto-sp13_S_contig566.16018.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length313
Homology
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BLAST of mRNA_Ecto-sp13_S_contig566.16018.1 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.800e-19
Identity = 57/117 (48.72%), Postives = 66/117 (56.41%), Query Frame = 0 
Query:  192 DFPRRLRPPIPWRAGLQHVEPPHLGKKIVNLLRHSDLPWESGKLDILWVDPVTGENDLVPFSLKTLEEVYYNEELGGGAYSRSEQAATLQRFGNIRPEQSNWNSHSKMKMGLAAKRG 308
            DF    R P   R      EP HL KK+VN L HS L  +   L  LW DP T E + V FSLKTLEEV+  EE GGG  S +EQAA L RF  + PE    NSH+ M + L+AK G
Sbjct:    5 DFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKVG 121
[Close]
BLAST of mRNA_Ecto-sp13_S_contig566.16018.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.550e-10
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:  227 DLPWESGKLDILWVDPVTGENDLVPFSLKTLEEVYYNEELGGGAYSRSEQAATLQRFGNIRPEQSNWNSHSKMKMGLAAK 306
            DLPW+S  L  + VDP TG  +LV FSLKTLE+V+Y EE GGG +   E+ A L R+  +  EQ N +  + M + LA K
Sbjct:  363 DLPWKSRNLAKVCVDPETGGYELVEFSLKTLEKVWYTEEKGGGKWLLEEKTAQLTRYSKVVSEQFNRSGFNCMSVRLAVK 442
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig566.16018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYD6_9PHAE2.800e-1948.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K071_9PHAE6.550e-1047.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig566contigEcto-sp13_S_contig566:9930..12593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig566.16018.1mRNA_Ecto-sp13_S_contig566.16018.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig566 7218..13198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig566.16018.1 ID=prot_Ecto-sp13_S_contig566.16018.1|Name=mRNA_Ecto-sp13_S_contig566.16018.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp
MLHVLGKTRTNRRTQEYGRCSSSLRPLLSVSKRPGSFRISPRRNAIWEGR
STERSWSSAVRTTSYSTPPNRRAGRFSMLWNTRKSSQPFTGSQKTAWRRL
FWSVWRDCSIRRREPCRRDEVSCLGPHAHQPRRLQRSPERGGDYRMRRRT
ILLKPYLSYASALSRTSNKDDATHTFSKWASEDDEFEQSFNDFPRRLRPP
IPWRAGLQHVEPPHLGKKIVNLLRHSDLPWESGKLDILWVDPVTGENDLV
PFSLKTLEEVYYNEELGGGAYSRSEQAATLQRFGNIRPEQSNWNSHSKMK
MGLAAKRGAGLQ*
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