prot_Ecto-sp13_S_contig56560.16011.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56560.16011.1
Unique Nameprot_Ecto-sp13_S_contig56560.16011.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.860e-54
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
Query:    1 AAAASSGSGSSNVVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            A+AASSGSGS +VVSLSGTWKFLL SGVSASPGGFEDPGFSDGSW+DIDVPGHWQLQDAGSRDPPIYTNT+YPFPNHPPYAPRENPTGLYRRRFALP
Sbjct:  117 ASAASSGSGSPHVVSLSGTWKFLLVSGVSASPGGFEDPGFSDGSWEDIDVPGHWQLQDAGSRDPPIYTNTNYPFPNHPPYAPRENPTGLYRRRFALP 213          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: UPI0009E612FA (uncharacterized protein LOC110037512 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E612FA)

HSP 1 Score: 95.1 bits (235), Expect = 2.850e-22
Identity = 46/85 (54.12%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   13 VVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            V SLSG WKFLLAS  +  P  F D GF D  WD + VP +WQ+      D PIYTN +YPFP +PPY P +NPTG Y+R F +P
Sbjct:   88 VKSLSGYWKFLLASSPTTVPVNFHDTGFDDSVWDSLPVPSNWQMH---GFDCPIYTNITYPFPLNPPYVPVDNPTGCYKRHFCIP 169          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A1V6KG37_9DELT (Beta-galactosidase n=2 Tax=Bacteria TaxID=2 RepID=A0A1V6KG37_9DELT)

HSP 1 Score: 97.4 bits (241), Expect = 1.550e-21
Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   16 LSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFAL 96
            L+G+WKFL       SP GFE P F DG+W+DI+VP HWQL+  G    P YT+  YPFP  PP+ PR NPTG+YRR+F L
Sbjct:   51 LNGSWKFLFLEAPELSPFGFEKPDFDDGAWEDIEVPSHWQLKGHGR---PHYTDLYYPFPVRPPFVPRANPTGIYRRQFFL 128          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A4D9D5D8_9STRA (Beta-galactosidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5D8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.380e-20
Identity = 52/99 (52.53%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   10 SSNVVSLSGT-----WKFLLASGVSASPGGFEDPGFSDGSWD-DIDVPGHWQL-QDAGSRDP----PIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            S N++ LSG      W+F  A  VSA+P  FEDPGF    WD D+ VPG+WQL +DA + +P    P+YTN  YP P HPPY PR NPTG YRR F +P
Sbjct:  139 SENIILLSGPASAGQWRFKYAPSVSAAPLHFEDPGFPADDWDTDVPVPGNWQLCKDASTGEPRFDIPVYTNFRYPIPLHPPYVPRGNPTGCYRRTFDVP 237          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A833VVC1_9POAL (Beta-galactosidase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VVC1_9POAL)

HSP 1 Score: 94.4 bits (233), Expect = 1.870e-20
Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   13 VVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            V SLSG W+F LAS  S+ P  F +  F D +WD + VP +WQ+      D PIYTN +YPFP +PP+ P ENPTG YRR F LP
Sbjct:   83 VQSLSGYWRFFLASSPSSVPSNFYENAFDDSNWDSLPVPSNWQMH---GFDRPIYTNVTYPFPMNPPFVPSENPTGCYRRHFRLP 164          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A7C3IRX2_9BACT (Beta-galactosidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3IRX2_9BACT)

HSP 1 Score: 93.2 bits (230), Expect = 4.750e-20
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   16 LSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            L+GTWKF  A+   A+P GFE P F   +W ++ VP +WQ+   G+   P+YTN  YPFP  PP+ P ENPTG YRR+FALP
Sbjct:   50 LNGTWKFHYAAAPHAAPEGFEQPAFDAAAWAELPVPSNWQMHGYGT---PVYTNVRYPFPVDPPHVPDENPTGSYRRQFALP 128          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A833UYQ7_9POAL (Beta-galactosidase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833UYQ7_9POAL)

HSP 1 Score: 93.2 bits (230), Expect = 4.770e-20
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   13 VVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            V SLSG W+F LAS  S+ P  F +  F D +WD + VP +WQ+      D PIYTN +YPFP +PP+ P ENPTG YR+ F LP
Sbjct:  118 VQSLSGYWRFFLASSPSSVPSNFYENAFDDSNWDSLPVPSNWQMH---GFDRPIYTNVTYPFPMNPPFVPSENPTGCYRKHFRLP 199          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: D8SQD3_SELML (Beta-galactosidase n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SQD3_SELML)

HSP 1 Score: 91.7 bits (226), Expect = 1.650e-19
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    9 GSSNVVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            G+S+++SLSG WKF LAS   + P  F    F+D SW  + VP +WQ+      D PIYTN +YPFP  PP  PRENPTG YRR F +P
Sbjct:   75 GASSLISLSGYWKFFLASKPESVPHWFYKNQFNDSSWKTLPVPSNWQMH---GYDTPIYTNVTYPFPFDPPLVPRENPTGCYRRSFVVP 160          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: A0A0K9PM40_ZOSMR (Glyco_hydro_2_N domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PM40_ZOSMR)

HSP 1 Score: 89.4 bits (220), Expect = 2.050e-19
Identity = 46/85 (54.12%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   13 VVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            V SLSG WKF LAS   A P  F    F D SWD + VP +WQ+      D PIYTN  YPFP +PPY P ENPTG YR+ F +P
Sbjct:   85 VKSLSGYWKFHLASNPDAVPHEFHGTCFDDSSWDALPVPSNWQMH---GFDTPIYTNIVYPFPLNPPYVPSENPTGCYRKNFHIP 166          
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Match: I0IG87_PHYMF (Beta-galactosidase n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) TaxID=1142394 RepID=I0IG87_PHYMF)

HSP 1 Score: 91.3 bits (225), Expect = 2.250e-19
Identity = 49/90 (54.44%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   10 SSNVVSLSGTWKFLLASGVSASPGGFEDPGFSDGS--WDDIDVPGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP 97
            SS VVSL G W FLLA   S +P GFE  GF DG   W  + VP  WQ+   G    P YTN ++PFP  PP  P +NPTG YRRRFALP
Sbjct:   53 SSRVVSLDGDWAFLLAPSPSEAPAGFEAEGFDDGGAGWGTLPVPSMWQMHGHGE---PAYTNVNFPFPVIPPRVPVDNPTGCYRRRFALP 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56560.16011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L299_9PHAE4.860e-5493.81Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
UPI0009E612FA2.850e-2254.12uncharacterized protein LOC110037512 n=1 Tax=Phala... [more]
A0A1V6KG37_9DELT1.550e-2155.56Beta-galactosidase n=2 Tax=Bacteria TaxID=2 RepID=... [more]
A0A4D9D5D8_9STRA1.380e-2052.53Beta-galactosidase n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A833VVC1_9POAL1.870e-2052.94Beta-galactosidase n=1 Tax=Carex littledalei TaxID... [more]
A0A7C3IRX2_9BACT4.750e-2052.44Beta-galactosidase n=1 Tax=Planctomycetes bacteriu... [more]
A0A833UYQ7_9POAL4.770e-2051.76Beta-galactosidase n=1 Tax=Carex littledalei TaxID... [more]
D8SQD3_SELML1.650e-1951.69Beta-galactosidase n=4 Tax=Selaginella moellendorf... [more]
A0A0K9PM40_ZOSMR2.050e-1954.12Glyco_hydro_2_N domain-containing protein n=1 Tax=... [more]
I0IG87_PHYMF2.250e-1954.44Beta-galactosidase n=1 Tax=Phycisphaera mikurensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..97
e-value: 2.4E-27
score: 98.0
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 10..97
IPR006104Glycosyl hydrolases family 2, sugar binding domainPFAMPF02837Glyco_hydro_2_Ncoord: 15..97
e-value: 3.8E-10
score: 39.9
IPR023933Glycoside hydrolase, family 2, beta-galactosidasePANTHERPTHR46323FAMILY NOT NAMEDcoord: 5..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56560contigEcto-sp13_S_contig56560:107..806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56560.16011.1mRNA_Ecto-sp13_S_contig56560.16011.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56560 106..806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56560.16011.1 ID=prot_Ecto-sp13_S_contig56560.16011.1|Name=mRNA_Ecto-sp13_S_contig56560.16011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
AAAASSGSGSSNVVSLSGTWKFLLASGVSASPGGFEDPGFSDGSWDDIDV
PGHWQLQDAGSRDPPIYTNTSYPFPNHPPYAPRENPTGLYRRRFALP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR006104Glyco_hydro_2_N
IPR023933Glyco_hydro_2_beta_Galsidase