prot_Ecto-sp13_S_contig10133.160.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10133.160.1
Unique Nameprot_Ecto-sp13_S_contig10133.160.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10133.160.1 vs. uniprot
Match: D7FYE3_ECTSI (SUN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYE3_ECTSI)

HSP 1 Score: 554 bits (1428), Expect = 2.100e-194
Identity = 308/346 (89.02%), Postives = 316/346 (91.33%), Query Frame = 0 
Query:    2 EGGAYVRLVEDAGLSAAAAADAAAAADGDRSLQTRVEAIAAQEVALKWGEAEATGEHGGGGAVSREAGVLVTVEEAEELIAREVEMFSSGGTGMPDYASLTPGAKVVYGPFPVAPAYNGEEQQGVGMVENKGWLTSKTLASTELEWHDYLLHMLRVPGRVYAEDGDAALSASNSLGSCFAFKGGEGRLTVELARPLPXXXXXXXXXXXXXX-----AGFVRVTHVSIEHARAASAPTAAQSAPRAFRVLGWDADPASAATITASLVGGGGDGGGEALLRPHVLLAGAEYRVGEGAPGVQTFAVAEGRGEEAAAAVPPVGWVTLEVQSNHGGAWTCLYGFRVHGDPI 342
            EGGAYVRLVEDAGLSA+ AADAAAAADGDR+LQTRVEAIAAQEVALKWGEAEATGEHGG  AVS+EAGVL TVEEAEEL+AREVEMFSSGGTGMPDYASLTPGAKVVYGPFPVAPAY+GE QQG GMVE KGWLTSKTLASTELEWHDYLLHMLRVPGRVYAEDGDAALSASNSLGSCFAFKGGEGRLTVELARP  XXXXXXXXXXXXXX     AGFVRVTHVSIEHARAASAPTAAQSAPRAFR+LGWDADPA  AT TASL         EALL PHVLLAGAEY+VGEGAPGVQTFAV EGRGEEA A VPPVGWVTLEVQSNHGGAWTCLYGFRVHGDP+
Sbjct:  183 EGGAYVRLVEDAGLSASTAADAAAAADGDRNLQTRVEAIAAQEVALKWGEAEATGEHGGRDAVSKEAGVLATVEEAEELVAREVEMFSSGGTGMPDYASLTPGAKVVYGPFPVAPAYDGEAQQGDGMVEKKGWLTSKTLASTELEWHDYLLHMLRVPGRVYAEDGDAALSASNSLGSCFAFKGGEGRLTVELARPXXXXXXXXXXXXXXXXXXXXAAGFVRVTHVSIEHARAASAPTAAQSAPRAFRILGWDADPAGTATTTASLXXXXXXXXXEALLSPHVLLAGAEYQVGEGAPGVQTFAVGEGRGEEAQAVVPPVGWVTLEVQSNHGGAWTCLYGFRVHGDPV 528
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10133.160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYE3_ECTSI2.100e-19489.02SUN domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012919SUN domainPFAMPF07738Sad1_UNCcoord: 291..340
e-value: 3.1E-5
score: 24.0
IPR012919SUN domainPROSITEPS51469SUNcoord: 125..342
score: 18.436
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 211..343
e-value: 1.6E-17
score: 65.7
coord: 69..200
e-value: 4.7E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR12911SAD1/UNC-84-LIKE PROTEIN-RELATEDcoord: 73..197
NoneNo IPR availablePANTHERPTHR12911:SF8KLAROID, ISOFORM A-RELATEDcoord: 214..341
NoneNo IPR availablePANTHERPTHR12911SAD1/UNC-84-LIKE PROTEIN-RELATEDcoord: 214..341
NoneNo IPR availablePANTHERPTHR12911:SF8KLAROID, ISOFORM A-RELATEDcoord: 73..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10133contigEcto-sp13_S_contig10133:502..2334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10133.160.1mRNA_Ecto-sp13_S_contig10133.160.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10133 502..4032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10133.160.1 ID=prot_Ecto-sp13_S_contig10133.160.1|Name=mRNA_Ecto-sp13_S_contig10133.160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
QEGGAYVRLVEDAGLSAAAAADAAAAADGDRSLQTRVEAIAAQEVALKWG
EAEATGEHGGGGAVSREAGVLVTVEEAEELIAREVEMFSSGGTGMPDYAS
LTPGAKVVYGPFPVAPAYNGEEQQGVGMVENKGWLTSKTLASTELEWHDY
LLHMLRVPGRVYAEDGDAALSASNSLGSCFAFKGGEGRLTVELARPLPPP
PGDEKPAAAAAAAGFVRVTHVSIEHARAASAPTAAQSAPRAFRVLGWDAD
PASAATITASLVGGGGDGGGEALLRPHVLLAGAEYRVGEGAPGVQTFAVA
EGRGEEAAAAVPPVGWVTLEVQSNHGGAWTCLYGFRVHGDPIH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012919SUN_dom
IPR008979Galactose-bd-like_sf