prot_Ecto-sp13_S_contig562.15958.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig562.15958.1
Unique Nameprot_Ecto-sp13_S_contig562.15958.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A4S0W7_OSTLU (Histone H3 n=6 Tax=Eukaryota TaxID=2759 RepID=A4S0W7_OSTLU)

HSP 1 Score: 240 bits (612), Expect = 9.230e-80
Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: E1ZR66_CHLVA (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1ZR66_CHLVA)

HSP 1 Score: 239 bits (611), Expect = 1.310e-79
Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A0A7S3FY28_9SPIT (Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759 RepID=A0A7S3FY28_9SPIT)

HSP 1 Score: 239 bits (610), Expect = 1.930e-79
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: C1BU06_LEPSM (Histone H3 n=6 Tax=Protostomia TaxID=33317 RepID=C1BU06_LEPSM)

HSP 1 Score: 239 bits (609), Expect = 2.650e-79
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A++ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: H33_ARATH (Histone H3.3 n=266 Tax=cellular organisms TaxID=131567 RepID=H33_ARATH)

HSP 1 Score: 238 bits (608), Expect = 3.760e-79
Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: B8CC53_THAPS (Histone H3 n=8 Tax=cellular organisms TaxID=131567 RepID=B8CC53_THAPS)

HSP 1 Score: 238 bits (608), Expect = 3.760e-79
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIR+YQKST+LLIRK PFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKAPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A7RJG4_NEMVE (Predicted protein n=6 Tax=Eumetazoa TaxID=6072 RepID=A7RJG4_NEMVE)

HSP 1 Score: 238 bits (608), Expect = 3.760e-79
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAP  GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL+REIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    2 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLIREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A5BX39_VITVI (Histone H3 n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A5BX39_VITVI)

HSP 1 Score: 238 bits (608), Expect = 3.890e-79
Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    3 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A0A7S0JMT0_9EUKA (Histone H3 n=12 Tax=Eukaryota TaxID=2759 RepID=A0A7S0JMT0_9EUKA)

HSP 1 Score: 238 bits (608), Expect = 4.020e-79
Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    4 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
[Close]
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Match: A0A6A4NAB8_LUPAL (Histone H3 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A4NAB8_LUPAL)

HSP 1 Score: 238 bits (608), Expect = 4.300e-79
Identity = 128/135 (94.81%), Postives = 131/135 (97.04%), Query Frame = 0 
Query:    1 SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
            +R  QTARKSTGGKAPRKQLATKAARKSAPT GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    6 ARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig562.15958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A4S0W7_OSTLU9.230e-8094.81Histone H3 n=6 Tax=Eukaryota TaxID=2759 RepID=A4S0... [more]
E1ZR66_CHLVA1.310e-7994.81Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
A0A7S3FY28_9SPIT1.930e-7994.07Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759... [more]
C1BU06_LEPSM2.650e-7994.07Histone H3 n=6 Tax=Protostomia TaxID=33317 RepID=C... [more]
H33_ARATH3.760e-7994.81Histone H3.3 n=266 Tax=cellular organisms TaxID=13... [more]
B8CC53_THAPS3.760e-7994.07Histone H3 n=8 Tax=cellular organisms TaxID=131567... [more]
A7RJG4_NEMVE3.760e-7994.07Predicted protein n=6 Tax=Eumetazoa TaxID=6072 Rep... [more]
A5BX39_VITVI3.890e-7994.81Histone H3 n=5 Tax=Mesangiospermae TaxID=1437183 R... [more]
A0A7S0JMT0_9EUKA4.020e-7994.81Histone H3 n=12 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
A0A6A4NAB8_LUPAL4.300e-7994.81Histone H3 n=2 Tax=Mesangiospermae TaxID=1437183 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 57..74
score: 97.46
coord: 79..97
score: 80.66
coord: 16..30
score: 92.32
coord: 33..54
score: 93.58
coord: 2..16
score: 83.77
coord: 113..134
score: 94.86
coord: 97..113
score: 96.93
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 33..135
e-value: 2.4E-74
score: 263.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 4..135
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 14..20
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 66..74
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 5..131
e-value: 1.4E-51
score: 174.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..135
e-value: 1.5E-77
score: 260.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..132
NoneNo IPR availablePANTHERPTHR11426:SF211coord: 4..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig562contigEcto-sp13_S_contig562:9034..10914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig562.15958.1mRNA_Ecto-sp13_S_contig562.15958.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig562 7689..10914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig562.15958.1 ID=prot_Ecto-sp13_S_contig562.15958.1|Name=mRNA_Ecto-sp13_S_contig562.15958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
SRFPQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALRE
IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYL
VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold