prot_Ecto-sp13_S_contig5578.15886.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5578.15886.1
Unique Nameprot_Ecto-sp13_S_contig5578.15886.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A6H5JG48_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG48_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 2.050e-93
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0
Query:    1 MARGGGGGRLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMRGQSK 148
            MAR GGGGRLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYY+ETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETE+RGRPDFAMGLLGTLAE+MRGQSK
Sbjct:    1 MARTGGGGRLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYIETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETEVRGRPDFAMGLLGTLAEQMRGQSK 148          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A2U1VTB1_9PROT (Small-conductance mechanosensitive channel n=2 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1VTB1_9PROT)

HSP 1 Score: 63.5 bits (153), Expect = 5.760e-9
Identity = 36/138 (26.09%), Postives = 69/138 (50.00%), Query Frame = 0
Query:   10 LLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMRGQS 147
            L++  ++     D+ ++++ + + ++EL AG V V++G+     + V  G+L+      G  +G   LLD    G V G + +L      P  A++ A  ++ V+ L +D L+  LR RP+ A  L   +A++    S
Sbjct:  234 LMRQLELFSAFRDEEIEELAQALNRLELPAGTVAVRQGEAGSSLFIVAEGVLDVRMQSDGQQEGRASLLDRMRPGDVFGEMSLLTG---QPRSASVVANTDAVVYELDKDHLDPVLRRRPELATQLAELMAQRQSRNS 368          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A536LRP2_9CHLR (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536LRP2_9CHLR)

HSP 1 Score: 60.8 bits (146), Expect = 6.090e-9
Identity = 35/135 (25.93%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   10 LLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMR 144
            +LK+ +I   +    L++VG+ M   +++AG+V++KEG    GF+ + +G +E V+   G+   +   L T   G   G + + +     P  AT++A  ++    ++R D   E++  P+ A+G++  L  ++R
Sbjct:    6 MLKNVEIFSELGRRDLERVGKLMVPRQIRAGEVIIKEGDQAAGFFVINSGKVEVVQDVDGSNPQQ---LATLGPGDFFGEMALFEGF---PRNATVRAMDDTECLAMTRWDFTAEMKNHPEIAVGIVHVLVRRLR 134          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A7C2XK92_9CHLR (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2XK92_9CHLR)

HSP 1 Score: 62.8 bits (151), Expect = 1.130e-8
Identity = 38/135 (28.15%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   10 LLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMR 144
             L+   +  G+SD+ L ++ + ++++ L AG++L  EG      Y ++ G LE +K    A+ G + LL  +  G V G + +L+S    P  A ++AR +S ++ + ++DL+  L      A  L GT+ ++ R
Sbjct:    5 FLRKIPLFAGLSDEDLHQMCQSIEEVHLPAGEMLFSEGSSGQKAYVIQEGTLEVLK----ASSGRDVLLAVRGPGEVIGEIALLESS---PRMAGVRARTDSILYAIQKEDLDRLLATSVSAANALFGTILKRWR 132          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A4P8H5F2_9MICO (Crp/Fnr family transcriptional regulator n=3 Tax=Brevibacterium TaxID=1696 RepID=A0A4P8H5F2_9MICO)

HSP 1 Score: 58.9 bits (141), Expect = 1.140e-7
Identity = 41/135 (30.37%), Postives = 64/135 (47.41%), Query Frame = 0
Query:   10 LLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMR 144
            +++++ +  G+ D+    + + M+   L+ G  L  EG P    Y V TG L   K    + DG E LL     G + G L +   G       T  A  ++ +  L  +DL T LR RP  AM LL +LA+++R
Sbjct:    5 VVRNASLFNGLDDESTSALVKIMKPRSLRRGTALFHEGDPDDELYIVSTGKL---KIGRESPDGRENLLSVVGPGEIIGELTLFDPGARS---TTATAVSQTELLSLKHEDLMTWLRERPQAAMNLLKSLAQRLR 133          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A6L3EXN7_9CHLR (Crp/Fnr family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3EXN7_9CHLR)

HSP 1 Score: 58.9 bits (141), Expect = 1.160e-7
Identity = 38/135 (28.15%), Postives = 73/135 (54.07%), Query Frame = 0
Query:    9 RLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKM 143
            +LL ++ +   +      ++ +  +  E++ G+VL+ EG+ MPG Y ++ G ++ VKS   +  G E +L   E G +   + +L + K +PA  T+ A   + +W +SR  +   L+  PDFA  ++  LA++M
Sbjct:   12 QLLNNAALFARLDAKTKQRLVQTARWREVQTGEVLMLEGEQMPGLYVLQYGWVKVVKS---SVSGREQVLRYFEPGEMFNEIGIL-TDKPNPA--TVIALEPAGLWLISRQAMRDLLQSEPDFAQHVIEQLADRM 140          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A0S8AZ90_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A0S8AZ90_9CHLR)

HSP 1 Score: 58.5 bits (140), Expect = 3.380e-7
Identity = 37/136 (27.21%), Postives = 70/136 (51.47%), Query Frame = 0
Query:    9 RLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMR 144
            + L+   +   + DD L+++ E +  + L AG+ L  EG      Y ++ G LE +K    A+ G + LL  ++ G V G + +L+     P  A++KAR ++ +  + RD L+  L+  P  A  +  T+ +++R
Sbjct:    3 KFLRKVPLFAELPDDDLNRLCEMLTVVNLPAGEELFAEGSRGEQAYVIQEGELEIIK----ASSGRDVLLAVRKTGEVIGEMALLEDM---PRMASVKARRDTRMLAIHRDQLQELLKTSPSAAEAMFYTVLKRLR 131          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A836W2A0_9BACT (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A836W2A0_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 1.720e-6
Identity = 32/110 (29.09%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   11 LKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDD 120
            LK + +  GVSDD L  + ER+ ++E KAG+ +++E +P   F+ +E G   +V+  +   + +E +L   EAG   G + +L     D   AT+ A  +  +  L +++
Sbjct:    9 LKKTPLFSGVSDDDLALIAERLDELEFKAGETVIREEEPGDAFFIIEKG---KVRISASIDENDEIILSYLEAGDYFGEMALLTG---DVRSATVTADEDLKLLKLKKEE 112          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A847FL69_9CHLR (SLC26A/SulP transporter family protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FL69_9CHLR)

HSP 1 Score: 54.3 bits (129), Expect = 1.080e-5
Identity = 33/125 (26.40%), Postives = 62/125 (49.60%), Query Frame = 0
Query:   19 GVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKM 143
            G   +++ +V + M+++ L+AG VL+++G+P  G Y+++ G +       G   G+   L T+  G+V G + +       PA A++   G  TV+ LS +DL       P+ A      +A  +
Sbjct:  634 GRQPEIMRRVVDYMEQLSLEAGQVLIRQGEPTKGLYFIQEGQVTIRLEGEG---GDSMRLRTRGPGTVVGEVGLYLGV---PATASVVVEGACTVYRLSAEDLSRMEAQAPELATAFHRAMASHL 752          
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Match: A0A4Q3XQH5_9BACT (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3XQH5_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 1.950e-5
Identity = 38/134 (28.36%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    9 RLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPMPGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADPAFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEK 142
            ++ K ++    +++D +  +  RM +     G  L+  G P   F+ +E+G L+ V       D EE ++ T   G  TG +  L SG+   A  T++A+G +TVW +S DDL   +  R D A  ++ T   +
Sbjct:   10 KMAKSTRAFPKLTEDQIAVLKSRMVRRTYPDGAALMIAGSPDFCFHLIESGELDVVAME----DCEERVVSTHGPGDFTGDVEDL-SGRG--ASVTLRAKGPTTVWEMSLDDLRATINDRIDLADTIMTTFISR 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5578.15886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JG48_9PHAE2.050e-9397.30Cyclic nucleotide-binding domain-containing protei... [more]
A0A2U1VTB1_9PROT5.760e-926.09Small-conductance mechanosensitive channel n=2 Tax... [more]
A0A536LRP2_9CHLR6.090e-925.93Cyclic nucleotide-binding domain-containing protei... [more]
A0A7C2XK92_9CHLR1.130e-828.15Cyclic nucleotide-binding domain-containing protei... [more]
A0A4P8H5F2_9MICO1.140e-730.37Crp/Fnr family transcriptional regulator n=3 Tax=B... [more]
A0A6L3EXN7_9CHLR1.160e-728.15Crp/Fnr family transcriptional regulator n=1 Tax=C... [more]
A0A0S8AZ90_9CHLR3.380e-727.21Uncharacterized protein n=2 Tax=Chloroflexi TaxID=... [more]
A0A836W2A0_9BACT1.720e-629.09Cyclic nucleotide-binding domain-containing protei... [more]
A0A847FL69_9CHLR1.080e-526.40SLC26A/SulP transporter family protein n=1 Tax=Ana... [more]
A0A4Q3XQH5_9BACT1.950e-528.36Cyclic nucleotide-binding domain-containing protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 16..140
e-value: 1.1E-10
score: 51.5
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 36..123
e-value: 5.7E-14
score: 51.9
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 16..142
score: 15.433
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 8..148
e-value: 1.2E-21
score: 78.8
NoneNo IPR availablePANTHERPTHR24567FAMILY NOT NAMEDcoord: 25..147
NoneNo IPR availablePANTHERPTHR24567:SF68CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR CRPcoord: 25..147
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 11..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5578contigEcto-sp13_S_contig5578:224..3223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5578.15886.1mRNA_Ecto-sp13_S_contig5578.15886.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5578 224..3223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5578.15886.1 ID=prot_Ecto-sp13_S_contig5578.15886.1|Name=mRNA_Ecto-sp13_S_contig5578.15886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MARGGGGGRLLKDSKIAIGVSDDVLDKVGERMQKMELKAGDVLVKEGQPM
PGFYYVETGMLERVKSHSGAADGEEFLLDTKEAGSVTGLLHVLKSGKADP
AFATIKARGESTVWCLSRDDLETELRGRPDFAMGLLGTLAEKMRGQSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like