mRNA_Ecto-sp13_S_contig11823.1572.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: D7FN92_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN92_ECTSI) HSP 1 Score: 744 bits (1922), Expect = 4.730e-256 Identity = 434/496 (87.50%), Postives = 443/496 (89.31%), Query Frame = 1
Query: 1 SISFSTGGMAGSAAGGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGTQRLDRKESNDFFYMGSIDAGGSNQLPGEGDTQESSPDVANGEVADGDSRRGRDAAVPITIPVPEGSMPSKVWERLQKGGSLLGDPEERMMAEGQDGNTPGSGT--DISRSMFGLSSPPHPPPGXXXNAPRWPSSLAAMFGXXXXXXXXXXNCSAGTVAPSTGPDASXXXXXXSTAMVPAGGVGGGGLSDMEEIALPMDILPSNKQPLAIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGG-AAVRKEEG--YRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
S+SF+TGGMAGSAA GFGGT VPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAG QRLDRKESNDFFYMGSIDAGGS QLPGEGDTQESSPDVANGE A GDSRRGR+AAVPITIPVPEGSMPSKVWERL+KGGSLLGDPEERMMAEGQDGNTPGSGT DISRSMFGLSSPP P XXX APRWPSSLAA+FGXXXXXXXXXX XXXXXX G LSD+EEIALP+DILPSNKQPLAIDRRVDDLLRLLRPA RAEGYRRSVFRFVTRQVKRALGAQCFPV GYAIQAYLPDEEVGISAFLCHGQE+SWFVRVNETLCKVSSEASEEA EEGSGT VGGC EKIT VGEGATPKQEG DGG AA+RKEEG YRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK
Sbjct: 322 SMSFTTGGMAGSAAAGFGGTPVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQRLDRKESNDFFYMGSIDAGGSTQLPGEGDTQESSPDVANGEDAAGDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSGTVKDISRSMFGLSSPPQPXXXXXXXAPRWPSSLAAIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-LSDVEEIALPLDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAAEEEGSGTSVGGCPEKITAVGEGATPKQEGGDGGGAAIRKEEGSSYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 816
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE) HSP 1 Score: 752 bits (1941), Expect = 1.740e-252 Identity = 429/491 (87.37%), Postives = 437/491 (89.00%), Query Frame = 1
Query: 1 SISFSTGGMAGSAAGGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGTQRLDRKESNDFFYMGSIDAGGSNQLPGEGDTQESSPDVANGEVADGDSRRGRDAAVPITIPVPEGSMPSKVWERLQKGGSLLGDPEERMMAEGQDGNTPGSGTDISRSMFGLSSPPHPPPGXXXNAPRWPSSLAAMFGXXXXXXXXXXNCSAGTVAPSTGPDASXXXXXXSTAMVPAGGVGGGGLSDMEEIALPMDILPSNKQPLAIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
SISF+TGGMAGSAA GFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAG QRLDRKESNDFFYMGSIDAGGS QLPGE DTQESSPDVA GEVADGDSRRGR+AAVPITIPVPEGSMPSKVWERLQKGGSL+GDPEERMMAEGQDGNTPGSGT+ISRSMFGLSSP G NAPRWPSSL XXXXXXXXXX XXXXXX MVPA GLSD+EEIALPMDILPSNKQPLAIDRRVDDLLRLLRPA RAEGYRRSVFRFVTRQVKRALGAQCFPV GYAIQAYLPDEEVGISAFLCHGQE+SWFVR+NETLCKVSSEASEE DAEEG GT VGGC EKIT VGEGATPKQEG AAVRKE+GYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK
Sbjct: 399 SISFTTGGMAGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQRLDRKESNDFFYMGSIDAGGSTQLPGEEDTQESSPDVAIGEVADGDSRRGRNAAVPITIPVPEGSMPSKVWERLQKGGSLMGDPEERMMAEGQDGNTPGSGTEISRSMFGLSSPXXXXXGAPPNAPRWPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---MVPAXXXXXXGLSDIEEIALPMDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRLNETLCKVSSEASEETDAEEGPGTSVGGCPEKITAVGEGATPKQEGGXXXAAVRKEDGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 886
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A7S2RYN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYN3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.430e-19 Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 835 LPMDILPSNKQPLAIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVR 1101
LPMD++PS++ D +V +LLRL+ P+ + R+ VFR +++QVKR LGA C V +A + YLPD+E+ ++AFLC GQE+SWF+R
Sbjct: 74 LPMDVIPSHRSATPADTKVGELLRLIAPSDVSNRARQRVFRLISQQVKRTLGAACISVGSFAERTYLPDQEIILAAFLCRGQEKSWFIR 162
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A6A7G9I3_9CRUS (Uncharacterized protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9I3_9CRUS) HSP 1 Score: 90.1 bits (222), Expect = 3.050e-15 Identity = 60/195 (30.77%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 889 VDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
V ++R L P+ +E R +FRFV+ V++A+G+Q +P +A++ YLPD ++ +SAF H + SW RV E L K + K T+ R+ N+ F+N + +K + ++ VDI AN+ ++T+A EE DQL+GK+HLFKR++LL K
Sbjct: 797 VSMVIRHLLPSEHSESVRFGIFRFVSEIVRKAVGSQVYPHGSFALKTYLPDGDIDLSAFFSHSRTASWAERVTEELMKE---------------------INKPTI----------------------DPLFRVQNIIFVNADP-KLVKSQI-GRITVDISANRTEALSTIAFFEEIDQLIGKNHLFKRTILLSK 946
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A0D9VR37_9ORYZ (Uncharacterized protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VR37_9ORYZ) HSP 1 Score: 82.8 bits (203), Expect = 6.320e-13 Identity = 59/200 (29.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query: 874 AIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
A ++R +L+ ++P +EG RR+V+ +V R + L Q F ++ YLPD ++ ++AF S + +T + +A E + K E R+ V +I+ V+ IKC+VDN + VDI NQVG + T+ LEE D L+G++HLFKRS++LIK
Sbjct: 25 AAEKRTSELIARIQPNEDSEGRRRAVYDYVRRLIMNCLSCQVFTFGSVPLKTYLPDGDIDVTAF-------SDSEELKDTWADLVRDALEHEE-------------------------------------KSENAEFRVKEVQYIH-AEVKIIKCLVDN-IVVDISFNQVGGLCTLCFLEEVDALIGQNHLFKRSIILIK 178
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A6P5GK10_ANACO (uncharacterized protein LOC109724067 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GK10_ANACO) HSP 1 Score: 80.5 bits (197), Expect = 6.700e-13 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query: 874 AIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
A +RR D++ +RP +E R+SV +V + + +LG++ FP ++ YLPD ++ ++AF G +++ C + E + +DAE + +V +IN V+ +KC++DN + VDI NQ+G + T+ LE D+ +GKDHLFKRS++LIK
Sbjct: 45 AAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE-EQNSDAE-----------------------------------------FEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 197
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: D8SJ08_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SJ08_SELML) HSP 1 Score: 79.7 bits (195), Expect = 1.390e-12 Identity = 56/202 (27.72%), Postives = 94/202 (46.53%), Query Frame = 1
Query: 871 LAIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQ-ERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
L + R +L+ ++P +E RR+V +V R +++ + F ++ YLPD ++ ++AF H + SW V L + E S++A+ R+ V +I V+ IKC+V+N + VDI NQ+G + T+ LEE D+L+G+DHLFKRS++L+K
Sbjct: 7 LQAENRTGELITRIQPTKFSEDRRRAVADYVERLIRKCFDCEVFTFGSVPLRTYLPDGDIDLTAFSGHQHLQESWANDVRAVL--EAEERSKDAE-------------------------------------------FRVKEVQYIQAEVVKIIKCLVEN-IVVDISFNQLGGLCTLCFLEEVDRLIGRDHLFKRSIILVK 162
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A199VTE1_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VTE1_ANACO) HSP 1 Score: 80.5 bits (197), Expect = 2.370e-12 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query: 874 AIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
A +RR D++ +RP +E R+SV +V + + +LG++ FP ++ YLPD ++ ++AF G +++ C + E + +DAE + +V +IN V+ +KC++DN + VDI NQ+G + T+ LE D+ +GKDHLFKRS++LIK
Sbjct: 45 AAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE-EQNSDAE-----------------------------------------FEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 197
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: A0A6V7PQJ9_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PQJ9_ANACO) HSP 1 Score: 80.5 bits (197), Expect = 2.770e-12 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query: 874 AIDRRVDDLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
A +RR D++ +RP +E R+SV +V + + +LG++ FP ++ YLPD ++ ++AF G +++ C + E + +DAE + +V +IN V+ +KC++DN + VDI NQ+G + T+ LE D+ +GKDHLFKRS++LIK
Sbjct: 51 AAERRAADIVARVRPTDDSESKRKSVVAYVQKLIGVSLGSEVFPFGSVPLKTYLPDGDIDLTAF---GSAAPDSTLISDVRCILEYE-EQNSDAE-----------------------------------------FEVKDVQYIN-AEVRLVKCLIDN-IIVDISFNQMGGLCTLCFLELVDRHIGKDHLFKRSIILIK 203
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Match: UPI000900E2E3 (uncharacterized protein LOC109159045 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000900E2E3) HSP 1 Score: 80.1 bits (196), Expect = 3.730e-12 Identity = 57/193 (29.53%), Postives = 92/193 (47.67%), Query Frame = 1
Query: 895 DLLRLLRPASRAEGYRRSVFRFVTRQVKRALGAQCFPVRGYAIQAYLPDEEVGISAFLCHGQERSWFVRVNETLCKVSSEASEEADAEEGSGTRVGGCLEKITVVGEGATPKQEGEDGGAAVRKEEGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIK 1473
D+++ ++P + + RR+V +V R ++ LG + FP ++ YLPD ++ ++AF C E + VN+ + + EGED A + +V I V+ +KC+V N + VDI NQ+G + T+ LE+ DQL+GKDHLFKRS++LIK
Sbjct: 47 DIIQKVQPTTVSAERRRAVIEYVQRLIRGTLGLEVFPYGSVPLKTYLPDGDIDLTAFGCPMVEDAL---VNDLVSVL------------------------------------EGEDQNMAAE------FTVKDVQLIR-AEVKLVKCIVQN-IVVDISFNQIGGLCTLCFLEQVDQLIGKDHLFKRSIILIK 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11823.1572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11823.1572.1 >prot_Ecto-sp13_S_contig11823.1572.1 ID=prot_Ecto-sp13_S_contig11823.1572.1|Name=mRNA_Ecto-sp13_S_contig11823.1572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp MAGSAAGGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVback to top mRNA from alignment at Ecto-sp13_S_contig11823:2..4807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11823.1572.1 ID=mRNA_Ecto-sp13_S_contig11823.1572.1|Name=mRNA_Ecto-sp13_S_contig11823.1572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11823:2..4807+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11823:2..4807+ >mRNA_Ecto-sp13_S_contig11823.1572.1 ID=mRNA_Ecto-sp13_S_contig11823.1572.1|Name=mRNA_Ecto-sp13_S_contig11823.1572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11823:2..4807+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |