mRNA_Ecto-sp13_S_contig1013.157.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1013.157.1
Unique NamemRNA_Ecto-sp13_S_contig1013.157.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE)

HSP 1 Score: 756 bits (1951), Expect = 1.290e-265
Identity = 397/416 (95.43%), Postives = 406/416 (97.60%), Query Frame = 1
Query:  373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            AWDAFMDGEEDATVLA GETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTAL+SP G AVAASVSEGM+EXXXXXXXXXXXXXGDTVSGAKWAQA+VATCIACF SFAGIFLLI+KRIANG+DLSHAYMFATGAILTA+LIHIIPESFERFEDAELGL+DLGIHTGVT+LAGITASIIIRAVCTAGHSHTGAPATAKVV ADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNL SGIPAILGAVLIL LGDQFT FQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGAL+IGIPLMFHAHCHA E HEGHDH
Sbjct:   93 AWDAFMDGEEDATVLAFGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALVSPSGTAVAASVSEGMEEXXXXXXXXXXXXXGDTVSGAKWAQAMVATCIACFASFAGIFLLISKRIANGIDLSHAYMFATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPATAKVVGADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGDQFTTFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALVIGIPLMFHAHCHADEGHEGHDH 508          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI)

HSP 1 Score: 738 bits (1906), Expect = 7.270e-259
Identity = 378/408 (92.65%), Postives = 387/408 (94.85%), Query Frame = 1
Query:  373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAG 1596
            AWDAFMDGEEDATVLASGET IPDATVVYQTTLDESI+VVPAEVTDAGAYALLLEHGGGEVSTALISP G AVAASVSE MDE             GDTVSGAKWAQAIVATCIACFTSF GIFLLINKRIANGVDLSHAYMFATGAILTASLIHI+PESFERFED+ELGLYDLGIHTGVT+LAGITAS+IIRAVCTAGHSHTGAPATAKVVEADG QSRGPTTPTIP+NL ELV+QRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALS T+DGKGLGDS+RKLGSFAFGALIIGIPLMFHAHCHAG
Sbjct:  105 AWDAFMDGEEDATVLASGETVIPDATVVYQTTLDESIIVVPAEVTDAGAYALLLEHGGGEVSTALISPLGTAVAASVSEFMDEEEEEE--------GDTVSGAKWAQAIVATCIACFTSFVGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTGAPATAKVVEADGGQSRGPTTPTIPDNLLELVEQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSLTMDGKGLGDSIRKLGSFAFGALIIGIPLMFHAHCHAG 504          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 8.080e-119
Identity = 226/501 (45.11%), Postives = 305/501 (60.88%), Query Frame = 1
Query:  280 RTKSQTSAFLVNLAGCQLTQHPAFRVPSCRTAWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHT----------------------------GAPATAKVVEADGSQ-SRGP--------------TTPTIP-----ENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST--VDGKG----LGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            R +  T AF+V LA    T+  A        AWDA+  G EDATVLA GE A P   VVYQ  L++ +V+V  EVT AGAYA+ LEHG  EV   L SP G                XXXXXXXXXX  + SG +W   +VA+ +    SFAG+ ++ NKR+A  + LSHA++FA+GA+LTA+L+HIIPE+ E  + +   L+DLG++ G+T+L G++ S++I  +  +GHSH+                            GA  T  +  A+G + S  P              T P  P     +NL  L+ +R GR+L D KGL+P+CWNV++GD VH+F  G TIGAAFL+C +T+GWT+TAS ++HE+P E+ADF+ALLNGGMS+KQA  +N +S + A+LG ++ILALGD  ++  ++I+LLLG+GSFIFI L+ELLPEAL  T  V  KG    +   L KLGSF  GA++IGIPL+   HC A   HEGHDH
Sbjct:   61 RFEQDTLAFMVVLAASADTEGLAGAEEDAEAAWDAYTSGAEDATVLAPGEPATPSTVVVYQVALEDPLVLVQVEVTIAGAYAVFLEHGAEEVGIVLASPSGVVXXXXXXX-------XXXXXXXXXXSGSASGTQWVNGLVASFVVSVCSFAGLLVVANKRVAYSIGLSHAFIFASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALVVTHAVSEKGAVAVMCSQLLKLGSFLLGAILIGIPLLVDQHCDAA--HEGHDH 552          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 4.320e-116
Identity = 213/434 (49.08%), Postives = 287/434 (66.13%), Query Frame = 1
Query:  373 AWDAFMDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAK---VVEADGSQSR-----GPTTPTIP--------ENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALS--STVDGKGLGDSLR----KLGSFAFGALIIGIPLMFHAHCHAGEEHE 1608
            AWD +  G EDATVLASGE+A P A VVYQ TL++ +V+VP +VT AGAYA+ LEHG  E                  EG   XXXXXXXXXXX  G   +G KW  A+VA+ +    SFAGI ++ +K +AN +DLSHA++FA+GA+LTA+L+HIIPE+ E  E++   L+DLG++ G+ ++ G++  I++ A+  +GHSH+   +       VEA G  ++     G +  T+P        +NL  L+  RKG++L D KGL+P+CWNVI GD VH+F  G  IGAAFLSC +TMGWT+ AS ++HEVP E+ADF+ALLNGGMS+ QA  +N +S + A+LG V+ILAL D  +   IAI+LL+GAGSFIFI L ELLP AL+  + V  +G G   R    KLGSF  GA++IGIPL+F  HC  G +H+
Sbjct:   98 AWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVPVDVTAAGAYAVFLEHGSDE------------------EGXXXXXXXXXXXXXXETGTATAG-KWGNALVASLVVSACSFAGIVVVASKHVANNIDLSHAFVFASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGHSHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVESNSDNLQALISARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKRGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGTGHDHD 512          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 7.700e-98
Identity = 189/385 (49.09%), Postives = 246/385 (63.90%), Query Frame = 1
Query:  484 VVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST------VDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            +++P +V D GAYALL EHG  EV TAL+S  G  +  +  EG DEXXXXXXXXXXXX   + + A+W  AI+AT I    SF GI  +IN+++AN + LSH + FA+GA+LTASL+HI+PES E        L+D G+  G+ IL GI  SI+I A+  +GH                                 L    K R+LFD KGLKP+CWNVI G+ VH+F  G TIGAAFL+CGS+MGWTITAST++HE+P E+ADF+ALL GGMS+KQA  +N +S +  +LGAV+IL+L  Q ++  +++ILLLG+GSFIFI LTELLP AL  T        G  + + ++KLGSF  GA +IG  L+F  HC A    EGHDH
Sbjct:    1 MMIPVDVVDTGAYALLFEHGSDEVGTALVSESGDVLVGTSEEG-DEXXXXXXXXXXXX---SATAAQWGNAILATVIVSLCSFTGILTIINQKVANAIGLSHTFTFASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHXXXXXX---XXXXXXXXXXXXXXXXXXXAGTAPLALTDKERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLSDADVSVILLLGSGSFIFIALTELLPGALEVTKAESDKAGGAVMCNQMKKLGSFVLGAALIGGALIFDQHCEA----EGHDH 374          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 2.280e-90
Identity = 156/353 (44.19%), Postives = 226/353 (64.02%), Query Frame = 1
Query:  727 SFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHT-------------------------------------------------GAPATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSST--VDGKG----LGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            SFAG+ +++NKR+A  + LSHA++FA+GA+LTA+L+HIIPE+ E  + +   L+DLG++  +T+L+G+  SI+I  +  +GHSH+                                                 G    A  ++AD +Q   P   +  +NL  L+ +R+GR+L D KGL+P+CWNV++GD VH+F  G TIGAAFL+C +T+GWT+TAS ++HE+P E+ADF+ALLNGGMS+KQA  +N +S + A+LG ++IL+LGD  ++  ++I+LLLG+GSFIFI L+ELLPEAL+ T  V  KG    +   L KLGSF  GA++IG+PL+F  HC A   HEGHDH
Sbjct:    5 SFAGLLVVVNKRVAYSIGLSHAFIFASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVSDDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESST-DNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALAVTHAVSEKGAVAMMCSQLLKLGSFVLGAILIGLPLLFDQHCDAA--HEGHDH 354          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK)

HSP 1 Score: 162 bits (410), Expect = 1.640e-38
Identity = 133/455 (29.23%), Postives = 200/455 (43.96%), Query Frame = 1
Query:  448 TVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKR----IANGVDLSHAYMFATGAILTASLIHIIPESF---ERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEADGSQSRGPTTPTIP--ENLWELVQQ---------------------------------------------RKGRALFDF----------KGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            T+V     DE++     E  DA  YAL  +H   E+   L    G  + A +SE   E    XXXXXXXX    VS   W   I A  +A   +  G+ L    R        + +  A  F +GA+L+A+++H+IPE +   E F D E     LG + G+TIL G+  S+I+       H+   A     V E   + +   T    P  +++ E+  +                                             R+GR+              +G++P  WN+++GD + +   G  I  AF  C S+MGW +  + + HE+P E+ DF  L++ G+S  QAL  NL SG+ AI G +++L L    T   +  +LL G+G F+F G  ELLPE L++   G  L  ++ +    A GA  + + LM HAHC AG     H H
Sbjct:  107 TLVLDNENDETVFTF--ETLDASGYALFFQHSPDELDFTLKDASGTTLVAELSESSTEDHDHXXXXXXXXDELEVSSTVWGLVIGANVLAGAAAMVGLVLFSLMRGMGDRTKAIAMQLATAFGSGALLSAAIVHLIPEGYALIESFVDGE----QLGTNAGLTILGGLMFSLILHMAIQHKHAAVDAEPGCSVKEERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVHVEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRGVRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGSGMFLFAGAAELLPELLAAP-GGPKL--AVARAAMVALGAAAVVVSLMSHAHCDAGFLGAAHAH 552          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: K3WD58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD58_GLOUD)

HSP 1 Score: 137 bits (344), Expect = 3.750e-30
Identity = 113/415 (27.23%), Postives = 183/415 (44.10%), Query Frame = 1
Query:  487 VVPAEVTDAGAYALLLEHGGGEVSTALISPFGAAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLI--NKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAE---LGLYDLG-IHTGVTILAGITASIIIRAVCTAGHSHTGAP----------------------ATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLK------PICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSF---AFGALIIGIPLMFHAHCHAGEEHEGHDH 1620
            +VP  VT AGA+ LL +HGG EVS  ++         S ++G+                D+ SG+ W   IVA+ +   TSF G+ +L     RI + V+  +   FA G +L   + H+ PE  E   D     +G++ LG I   + + +G+   +         H+H G                        +  +   A+G+    P TP    +  +  +       F    +K      P+ W   +GD  H+FT G  +  AF SC +++GW +    ++HEVP  + DF   L  GM + QAL  N ++ + ++LGA+++LA G    +  +  ++  G G+ +FIGL+ LLP  L       G+ D  R L  F   + G ++IG+  + H HC A      H H
Sbjct:  152 IVP--VTTAGAFMLLTQHGGDEVSVEVMD--------STNQGVSFLECHAGCDNEEEESDSKSGS-WVGPIVASLVISLTSFVGVIILSFGKSRIESIVE--YMTSFAAGCLLGVVVFHLYPEGSEYLGDVGEWVMGVWVLGGIAFSMAVESGVHMLLSSFGADHHDHAHGGXXXXXXXXXXXXXGEDAEKGLTHSSLQQPRAAEGNYVSHPLTPDAHHSHNDDPKLNHQSLTFSETYIKSLWFVEPVAWITAIGDFFHAFTDGVVLAVAFKSCSTSLGWAVALGIVLHEVPHRVGDFFIYLKAGMVVPQALFVNFLASLASLLGAIILLAAGTVSAH-ALGYLMGFGCGALLFIGLSVLLPPML-------GVRDRRRVLLHFFWFSLGCILIGLSTLQHKHCDAEGSGLVHSH 545          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A0P1AM43_PLAHL (Serine threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL)

HSP 1 Score: 134 bits (336), Expect = 2.250e-28
Identity = 103/369 (27.91%), Postives = 176/369 (47.70%), Query Frame = 1
Query:  502 VTDAGAYALLLEHGG-GEVSTALISPFG--AAVAASVSEGMDEXXXXXXXXXXXXXGDTVSGAKWAQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYM-FATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTA-----GHSHTGAPATAKVVEADGSQSRGPTTP--TIPENLWELVQQRKGRALF----DFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGI 1563
            V +AG YAL ++H    E    ++   G   AVA S++E  +E                 + A W   +VA  I    S  GIFLLI  R+     L  A +  + GA+  A+ +HI+PES E +       + L +   V  +  +   + +    +       H+H   PAT  +    G Q+  P T      + +    Q     ++F    D++ +KP+ + +++GD  H+F  G  I  AFL+C  ++G ++TAS ++HE+P E ADF+ L++ G +  QA+ +N +S + A +GA+++LA     TN  + ++L +G+G+ ++I  T+LLP  L            ++  G F    L+ GI
Sbjct:  126 VDEAGYYALHMQHDAVTEFGMQVLDAAGDEVAVALSLAEVAEENAETRSAR-------NATAAVWINTLVAVAIVTILSIVGIFLLIF-RVKFSTKLMDAMIALSAGALFGAAFLHILPESIEFYSAYGQMNFTLSMMFTVGFVVAMVVEMALELWVSLVQDGESHTHDHHPATIVLDHETGKQNVTPETGEYNAADTVSLSSQNETSVSVFSLKVDWQTIKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLA-AVPVTNETMGLLLAVGSGTLVYIAGTDLLPGVLR-----------VKSFGYFVINLLMFGI 474          
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Match: A0A6H5K199_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K199_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.590e-28
Identity = 93/303 (30.69%), Postives = 136/303 (44.88%), Query Frame = 1
Query:  754 NKRIANGVDLSHAYMFATGAILTASLIHIIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGAPATAKVVEAD-----------GSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSSTV--DGKGLG----DSLRKLGSFAFGALIIGIPLMFHAHCHAGEEHEG 1611
            + ++A+ + LSH + FA+ A+LT  L+HIIPES E        L+D G+  G  IL     SI+I A+  +GH                          G+          P NLW LV +R+GR+LFD KGL+ +CWNVI G+ V +F  G                                              A  +N +S    +LGAV+I++L  + ++  + + +LLG+GSFIFI  T LLP  L  T    G+  G    + ++KLGSF  GA + G  L+F+ +C     H G
Sbjct:   10 STKVAHAIGLSHTFTFASDALLTTFLLHIIPESLEGIVAKHDHLHDAGLWAGPAILDRTGFSILIHALMESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALKGKVTPGNLWALVSERQGRSLFDLKGLQLVCWNVIAGELVRNFADG----------------------------------------------AFRFNFLSAPTCVLGAVVIISLRSKLSDADVWVTILLGSGSFIFIAPTGLLPGVLEVTKVESGRAGGAVTCNQVKKLGSFLHGAALTGGALIFNQYCEGEGSHIG 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1013.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN39_9PHAE1.290e-26595.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRW4_ECTSI7.270e-25992.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L662_9PHAE8.080e-11945.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLW4_ECTSI4.320e-11649.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNP7_ECTSI7.700e-9849.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLV2_ECTSI2.280e-9044.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1U7C3_HETAK1.640e-3829.23Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
K3WD58_GLOUD3.750e-3027.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AM43_PLAHL2.250e-2827.91Serine threonine protein phosphatase 2a n=1 Tax=Pl... [more]
A0A6H5K199_9PHAE3.590e-2830.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1013contigEcto-sp13_S_contig1013:14304..18765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score723.8
Seed ortholog evalue4.6e-206
Seed eggNOG ortholog2880.D7FRW4
Model size2625
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.cellular zinc ion homeostasis
EggNOG OGsCOG0428@1,KOG2693@2759
Ec32 ortholog descriptionZinc/iron permease
Ec32 orthologEc-23_004220.1
Cds size1236
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1013.157.1prot_Ecto-sp13_S_contig1013.157.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1013 15306..18378 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462509.6091568-UTR-Ecto-sp13_S_contig1013:14303..153051681462509.6091568-UTR-Ecto-sp13_S_contig1013:14303..15305Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1013 14304..15305 -
1681462509.6613636-UTR-Ecto-sp13_S_contig1013:18378..187651681462509.6613636-UTR-Ecto-sp13_S_contig1013:18378..18765Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1013 18379..18765 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462509.6200798-CDS-Ecto-sp13_S_contig1013:15305..156141681462509.6200798-CDS-Ecto-sp13_S_contig1013:15305..15614Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1013 15306..15614 -
1681462509.6290228-CDS-Ecto-sp13_S_contig1013:16023..161821681462509.6290228-CDS-Ecto-sp13_S_contig1013:16023..16182Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1013 16024..16182 -
1681462509.6442392-CDS-Ecto-sp13_S_contig1013:16319..167461681462509.6442392-CDS-Ecto-sp13_S_contig1013:16319..16746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1013 16320..16746 -
1681462509.6533349-CDS-Ecto-sp13_S_contig1013:18037..183781681462509.6533349-CDS-Ecto-sp13_S_contig1013:18037..18378Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1013 18038..18378 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1013.157.1

>prot_Ecto-sp13_S_contig1013.157.1 ID=prot_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=412bp
MDGEEDATVLASGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLE
HGGGEVSTALISPFGAAVAASVSEGMDEDEDEDEDEEEEEEGDTVSGAKW
AQAIVATCIACFTSFAGIFLLINKRIANGVDLSHAYMFATGAILTASLIH
IIPESFERFEDAELGLYDLGIHTGVTILAGITASIIIRAVCTAGHSHTGA
PATAKVVEADGSQSRGPTTPTIPENLWELVQQRKGRALFDFKGLKPICWN
VIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVAL
LNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGS
FIFIGLTELLPEALSSTVDGKGLGDSLRKLGSFAFGALIIGIPLMFHAHC
HAGEEHEGHDH*
back to top

mRNA from alignment at Ecto-sp13_S_contig1013:14304..18765-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1013.157.1 ID=mRNA_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1013:14304..18765- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGTGTTTACCTCCAGGGCGAGGTGAAAAGTTAGTTTTGACCGCACTTTT CGGCGAATGTTTGCGGGGGATGAGGTTCCATGTACATCATGCGAGGCGCC TAACTTTATAGGGAGATTGCTGGTGTGATGCAGCCAAACGGACGGTCTGA GGGAATGTGACGCCTGTACCCAAAAATTGAGCAACACGGAAAGTCGCTGT ACACCATATCGCCGTCTGGAGGCTGACTTCAAGGAGTCTCGTGGACCCGT ACATCCGGTCTGACTGCCAAGAATACTTTCGCACAAAGTCCCAAACAAGC GCTTTTCTTGTCAACCTGGCTGGCTGCCAACTAACTCAACACCCCGCCTT CCGTGTTCCCTCGTGCCGAACAGCGTGGGACGCGTTCATGGACGGCGAAG AAGACGCGACCGTTCTAGCCTCCGGCGAAACTGCCATCCCGGACGCGACC GTAGTGTACCAGACCACCCTCGACGAGTCCATCGTCGTGGTGCCGGCCGA GGTTACGGACGCGGGAGCCTACGCCCTGCTGCTCGAGCACGGCGGCGGGG AGGTGAGCACGGCTCTCATCTCCCCGTTTGGTGCCGCGGTGGCTGCCTCC GTGAGCGAGGGAATGGACGAGGATGAGGACGAGGATGAGGACGAGGAGGA GGAGGAGGAGGGAGACACGGTGTCTGGAGCAAAGTGGGCACAGGCTATCG TGGCGACATGCATCGCCTGCTTCACCAGGTACGGAGAGCATCTTATCAAT TAAGCGACGGAGCTTCCCTGACAACCCTTCCCGGTTCTGAAGTAAGGAAA TGTATCACGGTGTCCTGTAGTCTATCTATCACTATATGATGACACAATCG TGGCCATCGAGTCGTCCCTCCCGGTGTGGAGATGTATTGGGATGCCCAAC CCCCGGATATTTGTTTGACCCGGACCAAAAATAATATTTCGCTGGTGCCC TCGCGGTTATTAACGAGAAGTAGAGACCCTCCCTGCTTTTTGTTTTAGTT TTGCCGTCCCCGGGGTGATCATTCCCTCGCGAGATCTTACCTGGAGAGTA CAAATTCTTCCATCCACCACTTCCGCTGCGATAGTGTCCCGCGATGTGCA TCAAGCCGCATCCAACGCCACGCAATACCGCAGTGTAAGAATCTGATGGT GAACTATTTAGCGTGTCGTCCAGTCAATGCAGCAGCAGCTGAATGCCCCC TCCCACCGAACAAGTGCGGTTCTGCTGGTCTAGACAAAAGCCATGAACAA GAATACCGAAGTGGCGCGTGCACGAACCCACATGAACAACAGCAGCAAAA CTTTTTTCTACGTTCGTTGCCCAGCCAGCTGATCTTCGTCTCCACCATTG TGTGCAATCTGTTTCTTGACCCGCCTGCCGTTGCCAAGTCAACGACTGCA CATTTTCCTCCTAAACCGTTGCTCGCAGATTTGCCAGTAGTAGTTTCTGG CAGCGAAGGAGGTGTGTGGTCGGTCACATCATTCTTGTCTATTTCCTTGC TCCCACCGGGTTGATACAGAGGCCGCTGGACACAAGAAATATCGCCTCCT CCTTTCTTTTTTCGGTTGTACGATCGGGGATGTGCATTCACGAACGAACA AATTATATGACGTCCACGACGACGTCTCAACGGAGACTTGCGGTGTGTGG AAATTGTAGGAAGAACCACCACTTTTGGGCTGCTGGAAACAAGAAACGTC GCCTCCTCCTTTCTTTTTTCGGTTGTACGGTCGGGGGTGTGCATTCACGA ACAAACAAATATATGAACCCCGTCCCCGATGACATTTCAACGGAGACTTG CGGTATGTGACAAATGCAGTGAGAAACACCATTTCAGGCTCCTTATGGCC TGCGCTGACTCTCGGCCCCGAAAAACGTGCAGCAAAAGAATTTTCTACGG GGCTTGGATCTTCAGAGGTAAGCACACGCTCTACTATCGCAGCTGTTAAA CACCACCTCACCTCACCTCACCTACCTTCTGCCCAACCCCGCCTGCTGTC TGCAATCTTCGCGCGGCAGCTTCGCGGGTATTTTCCTGCTCATCAACAAG CGCATCGCGAACGGCGTCGACCTCTCGCACGCGTACATGTTCGCGACTGG CGCAATCCTCACGGCATCCTTGATTCACATCATCCCCGAGTCGTTTGAGC GCTTTGAGGATGCAGAGCTTGGCTTGTACGACCTTGGAATCCACACCGGC GTCACCATCCTGGCTGGTATCACAGCCTCTATCATCATTCGCGCGGTGTG CACGGCGGGCCACTCGCACACAGGCGCCCCGGCCACCGCCAAGGTCGTTG AGGCAGACGGAAGCCAGTCGAGGGGGCCGACCACGCCGACGATCCCAGAG AATCTGTGGGAGTTGGTCCAGCAGAGGAAGGGCAGGGCGTTGTTCGACTT CAAGGGGCTCAAGCCTATCTGCTGGAACGTGATTGTCGGCGATGCGGTGA GTGGCTTGGGTGGAATTACACGAGCGACGAACGTCCTCACAATGAAATGT TAACACGTTTCCTCTCCCGTCGGCGCGCCTCCGACCAAGGTGTCCCACTC AGTCTCAGCCGATCTCTCTGCTCGGAACACCAGGTGCACAGCTTTACCTG TGGCTTCACGATCGGGGCGGCGTTCCTCAGCTGCGGCTCAACCATGGGCT GGACTATTACGGCGTCGACGTTGATCCACGAGGTTCCCAGCGAGATGGCC GACTTCGTCGCCCTCCTGAATGGTGGCATGAGCATCAAGCAGGTTGGTTT TGTTTGTACATGGCGTCTTCATTGGTTGGTCGACCGGCTGTTTTTTGTTG TTGTCCGAGAACGCTCTGTCCTCGGCGTGTGCACACCGTCTGCTGTCCCA CGTGCTGGTTCAGTGCCGGCGTCTTGGTGTGCCGTGGTCAGTCTTGCCCC GGCACGCCCATTCCGTCAGTAGTGCACATGAGAGCGTGATTCCTTTTTGG ACACCGCGCACACCCCCTGCCAAGCACCAAACGCCAGGCTTCACGTCGTG GTGTTGCATGTTTCATGATGACTTCGCTTCTTCCTTTCCTTGCTTCGTCG TGGAGAGTAGGTGGACATTAAGCTGCGTAAGTCAAATGTCTTTTGTACCC ATGCCAATCCACCTAATTTTCCCGCCGCCCGTCCTTGCGGACTGCTTATA GGCGCTCACCTGGAACTTGGTGTCCGGAATTCCCGCCATCCTGGGGGCGG TCCTCATCCTGGCGCTTGGTGACCAGTTCACGAACTTCCAGATCGCGATC ATCCTCCTGTTGGGCGCTGGGTCTTTCATCTTCATCGGCCTCACCGAACT GTTGCCGGAAGCCCTTTCCTCGACCGTTGACGGGAAGGGTCTGGGAGATT CTTTGCGCAAGCTTGGGTCGTTCGCGTTCGGAGCGCTCATCATTGGCATC CCCCTCATGTTCCACGCACACTGCCACGCCGGCGAGGAACACGAGGGCCA TGACCACTAAGCTCAAGCTGGTCGTGAACCGAAGCCTGTGCTTTAGATTT TTTCATTTTGAGTGAGTTTCAACTCTTTTTGCTCGGGGCTTCACTCCACG GGAAGGGTCGCTCAAAATCCGGTTGGTCGGGATGTTTAAAGATTTTCGTG TTTCGCTGTCTTGTATATCGGAGGGAGCTATCACAGCGCGGCTCGGGCAT TTGGTGTGCTTCGCTATGGCACGCACAGTAATCGAAGGAGTACACACGAA AAATATTTCCGCCCACATCAGCCCGCCCCCCCCGGACGGGGATTTCGATT TCGGTTTTACGTAGGGTAAGTGCAGGGGGCTGCGTACAGAACAGTAAGTC ATTGCCCCCCTCACTGCAGAGGGGTCTCTTTTCAACGTGCCTTTTTCGCA TTTATAAAGAAATCGACCCCCCCCTCGCCGCTTGGCCTCCGATTTCGATT TGTATGCCTAGTGTATGTGTCTTGAATTTTTTTTTCGCGTGTACCCTTGG TGTTAAAGTCGATTCAGATGTGAAAGTAATATACTCGTAGACCCGTAGGT GAGCGTGTAAGTAGGCGCTTTTCTCCATGGTGCGCACAATGGGTGTTGAA ATTGGCGACTGTTATCTTGTTTTGGATGTTTGCAGGCGCCGCGAACCCTC TTTTTTGGTACTTACCAGGATTCGTTGTGGGTATACGTTAGCCAGGTAGA CACTACAGTAGGACTTGGTGCGCACGATGGGTGTCGTGGGTTTTAACGTT CGACGCGCGATGTGTCGTTTTGGATATGTTATGGCTCTGTCCCCGGTTGC TTGTGCTTTAGGCTACCCAGCAATCGTGTTGGTACCTTCGCGACCGTCGT ATGCTAGAAGCAGCACCGTGAGCCCTTCTTCATTCGACGAAGCTGGGTAA ACTCGGTTGCTTGGTAAAGGAGTGGCATCGTGATCGACCATATTACTACT TGCGGGCTTGGGATTTCGCCGCCTTTGCGCAACGCGCGCCAACCTACGCA ACCGGAAGCATG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1013:14304..18765-

>mRNA_Ecto-sp13_S_contig1013.157.1 ID=mRNA_Ecto-sp13_S_contig1013.157.1|Name=mRNA_Ecto-sp13_S_contig1013.157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1013:14304..18765- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGCGAAGAAGACGCGACCGTTCTAGCCTCCGGCGAAACTGCCAT
CCCGGACGCGACCGTAGTGTACCAGACCACCCTCGACGAGTCCATCGTCG
TGGTGCCGGCCGAGGTTACGGACGCGGGAGCCTACGCCCTGCTGCTCGAG
CACGGCGGCGGGGAGGTGAGCACGGCTCTCATCTCCCCGTTTGGTGCCGC
GGTGGCTGCCTCCGTGAGCGAGGGAATGGACGAGGATGAGGACGAGGATG
AGGACGAGGAGGAGGAGGAGGAGGGAGACACGGTGTCTGGAGCAAAGTGG
GCACAGGCTATCGTGGCGACATGCATCGCCTGCTTCACCAGCTTCGCGGG
TATTTTCCTGCTCATCAACAAGCGCATCGCGAACGGCGTCGACCTCTCGC
ACGCGTACATGTTCGCGACTGGCGCAATCCTCACGGCATCCTTGATTCAC
ATCATCCCCGAGTCGTTTGAGCGCTTTGAGGATGCAGAGCTTGGCTTGTA
CGACCTTGGAATCCACACCGGCGTCACCATCCTGGCTGGTATCACAGCCT
CTATCATCATTCGCGCGGTGTGCACGGCGGGCCACTCGCACACAGGCGCC
CCGGCCACCGCCAAGGTCGTTGAGGCAGACGGAAGCCAGTCGAGGGGGCC
GACCACGCCGACGATCCCAGAGAATCTGTGGGAGTTGGTCCAGCAGAGGA
AGGGCAGGGCGTTGTTCGACTTCAAGGGGCTCAAGCCTATCTGCTGGAAC
GTGATTGTCGGCGATGCGGTGCACAGCTTTACCTGTGGCTTCACGATCGG
GGCGGCGTTCCTCAGCTGCGGCTCAACCATGGGCTGGACTATTACGGCGT
CGACGTTGATCCACGAGGTTCCCAGCGAGATGGCCGACTTCGTCGCCCTC
CTGAATGGTGGCATGAGCATCAAGCAGGCGCTCACCTGGAACTTGGTGTC
CGGAATTCCCGCCATCCTGGGGGCGGTCCTCATCCTGGCGCTTGGTGACC
AGTTCACGAACTTCCAGATCGCGATCATCCTCCTGTTGGGCGCTGGGTCT
TTCATCTTCATCGGCCTCACCGAACTGTTGCCGGAAGCCCTTTCCTCGAC
CGTTGACGGGAAGGGTCTGGGAGATTCTTTGCGCAAGCTTGGGTCGTTCG
CGTTCGGAGCGCTCATCATTGGCATCCCCCTCATGTTCCACGCACACTGC
CACGCCGGCGAGGAACACGAGGGCCATGACCACTAA
back to top