prot_Ecto-sp13_S_contig11756.1510.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11756.1510.1
Unique Nameprot_Ecto-sp13_S_contig11756.1510.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.190e-103
Identity = 155/158 (98.10%), Postives = 158/158 (100.00%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDE++FKPSPTEGSMTMGKWVRKIIS+MQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE
Sbjct:  121 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEELWGWLEPYMDDEKKFKPSPTEGSMTMGKWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 278          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 9.930e-99
Identity = 154/178 (86.52%), Postives = 156/178 (87.64%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE--------------------ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY YCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE                    ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIIS+M YYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADE+NDPSWYDAVINSVE
Sbjct:   89 VVDEIYRYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISDMHYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEDNDPSWYDAVINSVE 266          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S2UU23_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU23_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.150e-54
Identity = 93/169 (55.03%), Postives = 115/169 (68.05%), Query Frame = 0
Query:   11 HVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKPSPTEGS-MTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            HVAPW  GT+R PS+AFCLLMK   ++LT  QM  +L H++                    LW W+EP++DDEEE  PSP   S MTMG++V+KI+S+MQYYGTMLPRIPV IERKMKV +LLHEE KKR   N    + LKPG K+RAIY+D +NDP+WY+A I  VE
Sbjct:    3 HVAPWQTGTTRTPSTAFCLLMKFLCMRLTEKQMLGLLHHQDSPYIRAIGFLYLRYTHPPKLLWDWIEPFLDDEEEITPSPDPSSKMTMGQYVQKIVSDMQYYGTMLPRIPVPIERKMKVLMLLHEEKKKRAALNRSQRHRLKPGAKIRAIYSDADNDPAWYEAEILQVE 171          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S3YJF6_HETAK (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJF6_HETAK)

HSP 1 Score: 173 bits (439), Expect = 3.570e-52
Identity = 96/173 (55.49%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    6 YSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKP-SPTEGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSV 157
            Y+    V PW+ GTSRVPSSAFCLL KL + +LT  QM+ IL H +                    L  W EP++DDEEEF P +    +MT+G++V KII++MQYYGTMLPRIPV IERKMKV LLLHEE  KR  AN RIV  L+ G +VRAIY DEENDP+WYDA I  V
Sbjct:    1 YNKVGTVEPWSTGTSRVPSSAFCLLFKLCMFQLTERQMHSILNHPDSPYIRALGFLYLRYTMAPRNLMRWFEPFLDDEEEFAPGADPNATMTVGQFVHKIITDMQYYGTMLPRIPVPIERKMKVLLLLHEEKNKRAVANQRIVRQLQAGARVRAIYGDEENDPAWYDAEILEV 173          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A6A3QKY3_9STRA (Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QKY3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.120e-49
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY   DH  PW+PGT+R+PSS FCLL K F+++LTR QM  +L H                    EELW W EPY++D EEF  S       T+G+W+  ++ E  Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV+ LKPGTKVRA+YADEEN+P+ YDAVI SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHTDSPYIRVVGFLYLRFTCDPEELWTWFEPYLEDPEEFNASANPSLKTTIGEWLVSLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKERAKENLAIVDRLKPGTKVRAMYADEENEPAMYDAVITSVE 252          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: K3WW49_GLOUD (Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW49_GLOUD)

HSP 1 Score: 173 bits (439), Expect = 4.860e-49
Identity = 88/179 (49.16%), Postives = 119/179 (66.48%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY   DH  P +PGT+R+PS+ FCLL K F+++LT  QM  +L H                    E+LWGW EPY+DD+EEF  +       T+G+W+  ++ ++ Y+GT+LPRIP  IE  +KV+LLLH   K+RE+AN  IV  LKPGTK+RA+YADE+N+P+ YDAVI+SVE
Sbjct:   76 VVDEIYYRVDHAEPLSPGTARIPSTCFCLLHKFFLMRLTMKQMQGLLKHTDSPYIRAVGFLYLRYTCDPEKLWGWYEPYLDDKEEFNAAANPNVKTTIGEWLVGLLEDINYFGTILPRIPKKIEDSIKVKLLLHGRKKEREQANLSIVEFLKPGTKIRAMYADEDNEPAMYDAVIDSVE 254          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A0P1ARE8_PLAHL (Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARE8_PLAHL)

HSP 1 Score: 170 bits (431), Expect = 5.950e-48
Identity = 89/179 (49.72%), Postives = 115/179 (64.25%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY   DH  PW+PGT+R+PSS FCLL K  +++LTR QM  +L H                    +ELW W EPY++D EEF  S       T+G+W+ +++ E  Y+GT+LPRIP  IE  +KV+LLL    KKR K N  I++ LKPGTKVR++YADEEN+P+ YDAVI SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFCLMRLTRKQMQGLLRHKDSPYIRVVGFLYLRFTCDPDELWTWFEPYLEDSEEFNASANPSIKTTIGEWLIRLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKKRAKENLAIISHLKPGTKVRSMYADEENEPAMYDAVIESVE 252          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A8K1CAH7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAH7_PYTOL)

HSP 1 Score: 168 bits (425), Expect = 7.200e-48
Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEGSMT-MGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY   DH  P+APGT+R+PS+ FCLL K F ++LT  QMN +L H                    EELW W  PY++D EEF  S      T +GKW++ ++ E  Y+GT+LPRIP      +KV+LLLH+  ++RE+AN  IV  LKPGTKVRA+YAD+EN+P+ Y+AVI+SVE
Sbjct:   74 VVDEIYYRVDHAEPFAPGTARMPSTCFCLLFKCFTMRLTVKQMNGLLKHTDSPYIRAIGFLYLRYAGEPEELWKWFAPYLNDTEEFNASANPNDKTTIGKWLKGLLEENNYFGTILPRIPKKHLDNIKVRLLLHDRCQEREQANLSIVKYLKPGTKVRALYADDENEPAMYEAVIDSVE 252          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A225VT78_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VT78_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.310e-48
Identity = 89/179 (49.72%), Postives = 113/179 (63.13%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVH--------------------EELWGWLEPYMDDEEEFKPSPTEG-SMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVE 158
            VVDEIY   DH  PW+PGT+R+PSS FCLL K F+++LTR QM  +L H                    EELW W EPY+ D EEF  S       T+G+W+  ++    Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV+ LKPG K+RA+YADEEN+P+ YDAVI+SVE
Sbjct:   74 VVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHKDSPFIRVVGFLYLRFTCDPEELWTWFEPYLADPEEFNASANPSLKTTIGEWLVSLLEANNYFGTILPRIPKKIEDLIKVKLLLFNHKKERAKENLAIVDRLKPGIKIRAMYADEENEPAMYDAVIDSVE 252          
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Match: A0A7S2B1R6_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1R6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.060e-47
Identity = 85/178 (47.75%), Postives = 111/178 (62.36%), Query Frame = 0
Query:    1 VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEE--------------------LWGWLEPYMDDEEEFKPSPT-EGSMTMGKWVRKIISEMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSV 157
            VVDEIY  C +V PW+PGT R+PS+AFCLL KL  ++LT   M  +L H +                    +W W E Y+ DEEEF P+   E  MT+GKW  KI+++M YY TMLPRIPV +ERK+K  L+L E+ ++R   N   V+ L  G +VRAIY DE+NDP+WY AV+N V
Sbjct:  108 VVDEIYHKCKNVEPWSPGTQRLPSTAFCLLTKLLTLRLTTKMMQGMLSHRDSPYIRAIGFLYIRVATEPKNIWNWFEEYIADEEEFAPTADPELKMTIGKWCTKILTDMSYYNTMLPRIPVPVERKIKAYLILFEDEQRRAGDNMAFVSELVSGLEVRAIYGDEDNDPAWYPAVVNEV 285          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11756.1510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPC2_ECTSI1.190e-10398.10Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEK1_9PHAE9.930e-9986.52Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2UU23_9STRA1.150e-5455.03Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fib... [more]
A0A7S3YJF6_HETAK3.570e-5255.49Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Het... [more]
A0A6A3QKY3_9STRA1.120e-4951.40Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora ... [more]
K3WW49_GLOUD4.860e-4949.16Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangiu... [more]
A0A0P1ARE8_PLAHL5.950e-4849.72Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara hal... [more]
A0A8K1CAH7_PYTOL7.200e-4849.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VT78_9STRA8.310e-4849.72Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora m... [more]
A0A7S2B1R6_9STRA1.060e-4747.75Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Flo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005037Pre-mRNA-splicing factor 38PFAMPF03371PRP38coord: 1..51
e-value: 2.4E-11
score: 43.8
coord: 50..104
e-value: 9.5E-10
score: 38.6
IPR005037Pre-mRNA-splicing factor 38PANTHERPTHR23142UNCHARACTERIZEDcoord: 51..120
coord: 1..50
NoneNo IPR availablePANTHERPTHR23142:SF2PRE-MRNA-SPLICING FACTOR 38Bcoord: 1..50
NoneNo IPR availablePANTHERPTHR23142:SF2PRE-MRNA-SPLICING FACTOR 38Bcoord: 51..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11756contigEcto-sp13_S_contig11756:2023..4874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11756.1510.1mRNA_Ecto-sp13_S_contig11756.1510.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11756 2023..4874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11756.1510.1 ID=prot_Ecto-sp13_S_contig11756.1510.1|Name=mRNA_Ecto-sp13_S_contig11756.1510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
VVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE
ELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISEMQYYGTMLPRIPV
LIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWY
DAVINSVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005037PRP38