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Homology
BLAST of mRNA_Ecto-sp13_S_contig1175.1507.1 vs. uniprot
Match: D8LT23_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT23_ECTSI) HSP 1 Score: 146 bits (368), Expect = 5.490e-34 Identity = 125/177 (70.62%), Postives = 128/177 (72.32%), Query Frame = 1
Query: 628 ATRKELLSEQKEAFVEREEDLRRRVRELQEEAIAVATEHEAALAGERAAGLQNLQLEKEEAAKREQXXXXXXXXXXXVVESLRQDLEEAVAERDEAESAVQKRGDGVRQRALGLAAELREEKALNAQLRAASEEAALDAEEVKVEMTSLRAXXXXXXXXXXXXXXAELPELRARLEE 1158
ATR+ELLSEQKEAFVEREEDL+RRV AIA ATEHE L GERAAGLQNLQLEKEEAAKR XXXXXXXXXXX SAVQKRGDGVRQRALGLAAELREEKALNAQLRAASEEAALDA K MT XXXXXXX AELP+LRAR EE
Sbjct: 1556 ATREELLSEQKEAFVEREEDLQRRVXXXXXXAIAAATEHEXXLTGERAAGLQNLQLEKEEAAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVQKRGDGVRQRALGLAAELREEKALNAQLRAASEEAALDAXXXKXXMTXXXXXXXXXXXENQALEEAELPDLRARPEE 1732
BLAST of mRNA_Ecto-sp13_S_contig1175.1507.1 vs. uniprot
Match: A0A6H5K8V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V4_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 3.370e-14 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 1
Query: 628 ATRKELLSEQKEAFVEREEDLRRRVRELQEEAIAVATEHEAALAGERAAGLQNLQLEK 801
AT +EL SEQ+EAFVEREEDL+RRVRELQEEAIA ATEHEAAL GERAAGLQNLQLEK
Sbjct: 1088 ATWEELPSEQREAFVEREEDLQRRVRELQEEAIAAATEHEAALTGERAAGLQNLQLEK 1145
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 149.4 |
| Seed ortholog evalue | 3.9e-33 |
| Seed eggNOG ortholog | 2880.D8LT23 |
| Model size | 1345 |
| KEGG ko | ko:K10401,ko:K11498 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| EggNOG free text desc. | microtubule motor activity |
| EggNOG OGs | COG5059@1,KOG0242@2759 |
| Cds size | 1344 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009,ko03036,ko04812 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462618.6930683-CDS-Ecto-sp13_S_contig1175:10361..10467 | 1681462618.6930683-CDS-Ecto-sp13_S_contig1175:10361..10467 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 10362..10467 - |
| 1681462618.7048767-CDS-Ecto-sp13_S_contig1175:11042..11136 | 1681462618.7048767-CDS-Ecto-sp13_S_contig1175:11042..11136 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 11043..11136 - |
| 1681462618.7165058-CDS-Ecto-sp13_S_contig1175:11995..12109 | 1681462618.7165058-CDS-Ecto-sp13_S_contig1175:11995..12109 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 11996..12109 - |
| 1681462618.725179-CDS-Ecto-sp13_S_contig1175:13053..13195 | 1681462618.725179-CDS-Ecto-sp13_S_contig1175:13053..13195 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 13054..13195 - |
| 1681462618.7329388-CDS-Ecto-sp13_S_contig1175:13369..13456 | 1681462618.7329388-CDS-Ecto-sp13_S_contig1175:13369..13456 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 13370..13456 - |
| 1681462618.7414863-CDS-Ecto-sp13_S_contig1175:13962..14046 | 1681462618.7414863-CDS-Ecto-sp13_S_contig1175:13962..14046 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 13963..14046 - |
| 1681462618.7498205-CDS-Ecto-sp13_S_contig1175:14223..14406 | 1681462618.7498205-CDS-Ecto-sp13_S_contig1175:14223..14406 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 14224..14406 - |
| 1681462618.7590356-CDS-Ecto-sp13_S_contig1175:15426..15960 | 1681462618.7590356-CDS-Ecto-sp13_S_contig1175:15426..15960 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1175 15427..15960 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1175.1507.1 >prot_Ecto-sp13_S_contig1175.1507.1 ID=prot_Ecto-sp13_S_contig1175.1507.1|Name=mRNA_Ecto-sp13_S_contig1175.1507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
EGEAAKEALRASREQAEKAKQETKAVEELARVVRENAAVKKEAATEALRA SREEAARQKEAAKEALRVSLEQAETEIVAANEALRASRKDAERKREEAEK ALRAAREEVETAKEERKAGEESARVSLEKAAEDNETLKEALRVSREEAEA AKAGKKTAEESLGVAREEAERARASVRQELDSSLEEASALRAGFTEAENR FNDAAGAAEATRKELLSEQKEAFVEREEDLRRRVRELQEEAIAVATEHEA ALAGERAAGLQNLQLEKEEAAKREQELEERASELEGVVESLRQDLEEAVA ERDEAESAVQKRGDGVRQRALGLAAELREEKALNAQLRAASEEAALDAEE VKVEMTSLRARAAALEEEKQALEEAELPELRARLEEKDVECQRLATAKKE TVKRVQEEVARASGLEREVERLKSALHLSITTVQQHIASTDPYSPAAL back to topmRNA from alignment at Ecto-sp13_S_contig1175:10362..15960- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1175.1507.1 ID=mRNA_Ecto-sp13_S_contig1175.1507.1|Name=mRNA_Ecto-sp13_S_contig1175.1507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5599bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1175:10362..15960- (Ectocarpus species13 EcNAP12_S_4_19m) GAAGGGGAAGCGGCTAAGGAGGCGCTAAGGGCGTCGCGAGAGCAGGCCGA
GAAAGCCAAGCAAGAAACGAAGGCCGTGGAGGAGTTAGCCAGGGTCGTTC
GAGAGAACGCCGCCGTAAAAAAGGAGGCCGCCACGGAGGCATTACGGGCA
TCCCGAGAGGAGGCCGCCAGACAGAAAGAAGCGGCGAAGGAGGCGCTGCG
GGTCTCCCTAGAGCAGGCCGAGACGGAGATTGTTGCCGCCAACGAGGCGC
TGAGAGCCTCTCGGAAGGATGCCGAGAGGAAACGGGAAGAGGCTGAGAAG
GCGCTGAGGGCCGCTCGCGAAGAGGTCGAGACGGCAAAGGAAGAAAGAAA
GGCCGGGGAGGAATCGGCCCGGGTCTCTCTGGAGAAGGCGGCTGAGGATA
ATGAAACCCTCAAGGAAGCGTTGAGGGTCTCTCGAGAGGAAGCCGAGGCA
GCAAAAGCGGGAAAGAAAACCGCGGAGGAATCGCTTGGGGTTGCTAGGGA
GGAGGCCGAGAGAGCCCGGGCGTCCGTGCGGCAGGTGTGCAGAACGCACA
AGGCGATCTTTCTCTCGAAATAATATTTTTAGCTATGTTCGCACGTTTGC
GTGCCAAACTACGGGTGCCCCAGGAAGATAAGCCTCCATATCCAGGACAC
CCCACACAGGTGTTCTTGTAACATGGCGGTGGAACACATGCCAGGATATT
TCGATCGATCACAAGCTTACTGGCATGGTTTGAACAAGCGCGCCATCCGC
TTGATTGCCGTTGCCCTGCGGCTCTCCCTAGCTAGACTTTGGGGGAAAAA
TTCTCGTTTTTAAAATGGCAAGAAGTTGGTTTAACATCTACCCGAGGGCG
TTGTTTTTCTGTTCTGAAAAACTTGTTGTTGCTTTCAGCAACGTGTTAAT
AAGCTGGCAGCGCTTGGATGAAGACAAAGTCGTATACGGAGCCCCCAGAA
AAAGCGAGAAGCCAAGAAATTCTCGAAGAAAACTTACAAAAAGCCTGATA
TATTGACAGGATTACCAAGCGGTGGAAACCGAAGACGACGATTACCACCC
GATACCGAACCGTGAAAAGACGTCTGTTTTTCGGGGGGCGACAACCTTCT
CTTGTCGTCACGATGATGGAAAAGGGTTCTGCTGCTTGCTCTTAAAGAAA
TTCCTCGGAGCCAACTTGAAGATTATACGCAACCCTTCGTAGTGATGTAA
TGGCTGTTACGTGGTCACAATAGCCCCGAAGTTAGCGTCGACAACGTCAA
CTCAGACAGTAGAAGCAACGTCAATAGCAAGAAGGACAACAGCAGCAAAA
GCATGGCGTATCTCTGCGCTGTACACACTGGCAGCAACGGGCGACAGAGC
CAAATATGACCTCAAGGTGTAAAACCCTCACCATGCCTAAACCTTGGAGA
CATTTCAGAACAAATACTTCAACGATTTTATGGCGCTCCATCCGCAGTAT
CTCCATGAAACGACGACGCATCAACGAACAGCCAAGGAAATGAACGAAAA
AGTCCACTTCCACCCTTCCCCAAAGACCCCCAACACACGATCCACACAAA
ACAGGAACTCGATTCTTCCCTGGAAGAGGCCTCGGCGCTACGGGCAGGTT
TCACAGAGGCGGAGAACCGCTTCAACGATGCCGCGGGGGCGGCGGAGGCG
ACTCGGAAGGAACTACTTTCGGAACAGAAGGAGGCCTTTGTGGAGAGGGA
GGAAGATCTGAGGCGCCGCGTCCGGGAACTCCAGGAGGTGCGAACTGTTG
TTGTTGTTGTTGCTGCTGCTGCGGCTGTCGCGGCTGCTGTATCCCATTGA
AGTTTTCTTGTCGCTTTGCTGCTGTTGGTGGTGGTATTGTTGCTGGAGCT
TCCCCAAGATTCCGCCGTGTCTCTGTGTTGCTGTTTGTTCCGCATTGATC
AATCTCGACGGCAGGAAGCCATCGCAGTGGCGACCGAGCACGAGGCGGCC
CTGGCCGGGGAAAGAGCGGCCGGCCTCCAAAACCTGCAGTTGGAAAAGGT
GATGACATGAGAAGACTGAGAAAGCAGCACTGGAAAGAAGCACGATAGTA
GACACAAATAAGGGAAAATGAATCAACGCCTACCTTCAACTCCAAACGTG
TATGTTCGTGTAGACCAGGCGGTCTATTTGAAGTGTCTTGCATGTCTTCG
AGCAAGACCGTTGTTGTTCACTGCTTCTGTGTCGAACCGGCTTCAACTCA
GAACCCTATGCGCTGAAGCCGGAATCTCAAGTCATTCCGCCTGGATTACC
CTTTCGTCGACTTTCTGGCGAGCAGTGCAAAGCTCCACATTTGCAGAAAA
ACGCATGTGCTTCACTTCACCAGCACTATCCGAAAAGGCGTGGGCTTCGT
GTGTTCATGGAGCTGGCTCTTTCGATGTCGCTCTTCACCCGCGATCAACA
GAAATGACCGTTTGTTGTGTGGCTCTGTTTTTCTTCCTCTTAGATTCATT
CCCTCTATCTATCTGTCTGTCTGTCTGTCTGTCTGCCTCTCGTCCCTCTG
TCAGGAGGAAGCAGCGAAGCGCGAGCAAGAGCTGGAAGAAAGAGCTTCGG
AGCTTGAAGGGGTCGTGGAGTCGCTCAGGCAGGACCTCGAGGTGGGCCGG
GGGGTGGAATATGGTAGGAGTCAGGTCGAGAGGTTTGGGCGCGTCGAAAA
ATGAACGGACAGACGAGAATGTCATGCCCCGTACCTACATGTAGAGCGAG
CAGCTTTTTGAAAGGGGAAACGTGTCTAACATTTTATCGGTTTCTGGCGT
ACGTCTTGTGAGCAGGAGGCAGTGGCGGAGAGAGACGAAGCCGAGTCAGC
GGTCCAGAAGAGAGGGGATGGGGTGCGGCAGCGGGCGCTAGGCTTGGCGG
CCGAGCTTCGAGAGGAAAAGGCACTGAACGCTCAGCTGAGGGCCGCATCG
GAGGAGGGTGAGTGCATCATGCCTCTTCGTGCCCTCCAGCAGATTGACCA
CAGCTTGCGGGCGGCAATGGGCCTGATAGATCGATCCAATCCTGTATGCA
GTTCATTTCTCTTGAGGTTTTCGTCGCCGCACCCAAAGGTGGTGGCGACA
CTTGCGTGGCTCCTTTGACGGTTGCTCCAGAAAATCCTTTCCTCTCCTGA
AAGAGTATCACGGTACAACCCTCCTCCACACGAATTAGTGGCGAACGCGA
ACGTGATGGCTGCGTTTGCCCATAGACAGGAGGACACGGGGAGAATCACC
CCCACCTCCCCTACCCTCTAGAACAGATTCAAGGGATGCGCGAAACGACC
ACTCTGTGCTGTTTTCTCTCGCAGTAGGTAAAACTGTCACTAAGGGCCTC
GGCATCCGACTCTGCGTGGAGATTTGTTTGGTGTTCGTTATGCAGTAGCC
GATCGTGTGTGCGGTTATCCTGTGGCGGTGGTTAGGGAATGTCCATGCTG
TTGTTTTGGGGGATTGTTGTGTCTGCTGGTGAGTTCGTTCCCTCTGATAT
GCTCAACCCGGGATTTACACCCCCGGTGGCCGGACACCCGAAATCGCAAT
CTTGCAACCTTGCGCTGCTCTTGAATCTTTCTGTGTCCAACGTGTGCATC
GTGCTTCGTCGTATGTATCTATTATGCGCACCCACCGCGCTCACCGGCTA
ACTGATGAAAAGACGTGAAAACACACAACACATCTAAACGCCATAAATTA
AGACCCCATGAGGGGGCGGTATCGGGAAGGCTAAACTCTTCTCCGTAAGA
CGGAAACGGTAGCAACAGAAGAGATTTGCCCGTGTCTACCAAGGCTGCTG
CGTAACTTGAGGTGGGGAAGGTCGTCTGGCTCGAAGCTCTTGATCTCTTC
CACTCCATGCTTCCTTCCTCCATTTCTCTTTGTGTGCATGTGTGTGTTCA
GCTGCTCTGGACGCAGAAGAGGTCAAAGTGGAGATGACGTCACTGAGGGC
GAGGGCAGCGGCGCTAGAGGAGGAGAAGCAAGCCTTGGAGGAGGCCGAGC
TGCCCGAGCTAAGAGGTATGGCAGCTCTGGTGATGTCATCATCGTCGTAT
TCGTCATCGTTATTTTTGATTGTTGTTTGTTATTGTTTTCTCGGGTTGGT
CGTGTTGCATTCGACTGTTACCGCTACCGCTGTCCCTTGATAGCGCCGAC
TTGTGTTGCTCTTTTGAACCCAAGTCCAAATTTGGGACGCACTTGGTTCA
GCCACTAGCAGTGTAACCGAGGTTTCTTGAACACAGGGGTGAATGGAGTA
CACGAGTCTTGAAGATGATTGCGGTTCTTTCAGAACTCTGCTAAAAGAAA
CTACCGATTCCTCTCGGAGAGTAGTGTCTCCGTGGGTACGGCTAAGCTGT
ATATGACGATCAGCCTGATAAAACACAACGCATGGGTCCGAGGACCGGCG
GCCCTTCAGCTAATTGTTTTCGCCGCCACTGCCTTCGGTCTCAGCCGTGT
TAATGGTGCGTCCCGAGTGTGTCGTGTCAGCTGGTTCCCGCCTCATACTT
CGAAGTACTCTTGTTTTTTTTTGCATGAGGTATGAAGGTGTCTCTCTTTC
TCTTTCTGCGTTCTGTATACCTTTGTCAAAACAGACCGTGACCTCGCCAT
CTGTGTCTCCCTTCTCTTGCGACCAGCTCGACCAGAAGAAAGTTGCGGAT
GTGCTGGGCAGACGATGGAACGATGTCTTACGGCAGAGATCAATCAACAC
CGGCCCTATCCGTAAGCCGCGATGAAGCATTTCAATTTTTCCGCAGGTTG
GCGGAAAAGCGGAAAAAGCTTGGACATATTTCCACCGACCCGCGGAATGA
CGCCCCGCCCTTCCCTCCCTTGGTCCTTTTGGTTCCTCTCCGAACATTGC
CCCCCCCGGTACTTGTATGGCAAGCCCGTCTCGAGGAGAAGGACGTGGAG
TGCCAGCGCCTCGCCACGGCCAAAAAGGAGACCGTAAAGCGCGTGCAGGA
AGAAGTGGCGAGAGCAAGGTCCGTTTTTGATGTTGTTGTTACTGCTGGTG
CTGGTGCTGGGCTGTTGGTTATCGTTGTTCATGTTGCTCCTTCCGCTCCA
ACCGACGTCCAGATTGTCGAGTTTGTGGATTTGTGGAGATGGTCGTGTAC
CAAAGGGCGAGTTGTTGTTGCTATACTGGAAATGAAGGGGAATGGATGTA
ATTCCCACCTGTCTGTACGACTGTGTCCTGTCCCGAATGTTGTTGAACTA
GGCCAGAACGGTTGTGAACGATGACTACCGCACCAACAAAGGACAAAGGC
CTTCACAAATGGCCTTGTCCCCCCCACCCACTTAGCGTGTACTCGGTATA
GACGAAAGCAACTCATGTACCGGGCATCGAACATCCGATCAGAAGAAGTC
AAAGCCTCACACGAAATGACCCCCAGCTCCCTCTAAGTTCCACAACTGAC
CCGTTTACCCTTCGCTTGGAAAGGGTGAGCCGTTCCCTCCCGGGGCGTGC
GGCAGATGCACAATGAAATCTTGTTTCAGCTCAACATCACAGTCTTTATC
TCCCCCACCCGTGTTCGTTCCTCTTCCCCTGTCCCTTACGCAGTGGGCTC
GAGCGTGAGGTGGAGCGGCTGAAGTCGGCCCTTCACCTGTCCATTACCAC
CGTGCAGCAGCACATCGCGTCCACAGACCCGTACAGCCCGGCAGCCCTC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1175:10362..15960- >mRNA_Ecto-sp13_S_contig1175.1507.1 ID=mRNA_Ecto-sp13_S_contig1175.1507.1|Name=mRNA_Ecto-sp13_S_contig1175.1507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1175:10362..15960- (Ectocarpus species13 EcNAP12_S_4_19m) GAAGGGGAAGCGGCTAAGGAGGCGCTAAGGGCGTCGCGAGAGCAGGCCGA GAAAGCCAAGCAAGAAACGAAGGCCGTGGAGGAGTTAGCCAGGGTCGTTC GAGAGAACGCCGCCGTAAAAAAGGAGGCCGCCACGGAGGCATTACGGGCA TCCCGAGAGGAGGCCGCCAGACAGAAAGAAGCGGCGAAGGAGGCGCTGCG GGTCTCCCTAGAGCAGGCCGAGACGGAGATTGTTGCCGCCAACGAGGCGC TGAGAGCCTCTCGGAAGGATGCCGAGAGGAAACGGGAAGAGGCTGAGAAG GCGCTGAGGGCCGCTCGCGAAGAGGTCGAGACGGCAAAGGAAGAAAGAAA GGCCGGGGAGGAATCGGCCCGGGTCTCTCTGGAGAAGGCGGCTGAGGATA ATGAAACCCTCAAGGAAGCGTTGAGGGTCTCTCGAGAGGAAGCCGAGGCA GCAAAAGCGGGAAAGAAAACCGCGGAGGAATCGCTTGGGGTTGCTAGGGA GGAGGCCGAGAGAGCCCGGGCGTCCGTGCGGCAGGAACTCGATTCTTCCC TGGAAGAGGCCTCGGCGCTACGGGCAGGTTTCACAGAGGCGGAGAACCGC TTCAACGATGCCGCGGGGGCGGCGGAGGCGACTCGGAAGGAACTACTTTC GGAACAGAAGGAGGCCTTTGTGGAGAGGGAGGAAGATCTGAGGCGCCGCG TCCGGGAACTCCAGGAGGAAGCCATCGCAGTGGCGACCGAGCACGAGGCG GCCCTGGCCGGGGAAAGAGCGGCCGGCCTCCAAAACCTGCAGTTGGAAAA GGAGGAAGCAGCGAAGCGCGAGCAAGAGCTGGAAGAAAGAGCTTCGGAGC TTGAAGGGGTCGTGGAGTCGCTCAGGCAGGACCTCGAGGAGGCAGTGGCG GAGAGAGACGAAGCCGAGTCAGCGGTCCAGAAGAGAGGGGATGGGGTGCG GCAGCGGGCGCTAGGCTTGGCGGCCGAGCTTCGAGAGGAAAAGGCACTGA ACGCTCAGCTGAGGGCCGCATCGGAGGAGGCTGCTCTGGACGCAGAAGAG GTCAAAGTGGAGATGACGTCACTGAGGGCGAGGGCAGCGGCGCTAGAGGA GGAGAAGCAAGCCTTGGAGGAGGCCGAGCTGCCCGAGCTAAGAGCCCGTC TCGAGGAGAAGGACGTGGAGTGCCAGCGCCTCGCCACGGCCAAAAAGGAG ACCGTAAAGCGCGTGCAGGAAGAAGTGGCGAGAGCAAGTGGGCTCGAGCG TGAGGTGGAGCGGCTGAAGTCGGCCCTTCACCTGTCCATTACCACCGTGC AGCAGCACATCGCGTCCACAGACCCGTACAGCCCGGCAGCCCTC back to top
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