prot_Ecto-sp13_S_contig11566.1364.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11566.1364.1
Unique Nameprot_Ecto-sp13_S_contig11566.1364.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length374
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11566.1364.1 vs. uniprot
Match: D8LHW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW9_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 7.680e-10
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 
Query:    1 LVLGTEFCGDLKGVPWPPTLSSIVFWRRFN 30
            LVLGTEFCGDLKGVPWPPTLSSIVFWRRFN
Sbjct:  122 LVLGTEFCGDLKGVPWPPTLSSIVFWRRFN 151
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11566.1364.1 vs. uniprot
Match: A0A6H5L9V1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9V1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.180e-8
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:  342 KMEAGVVFPPGLDRIEFVDTYRRVEGGGENSS 373
            KMEAGVVFPPGLDRIEFVDTYRRVE GGE+SS
Sbjct:  320 KMEAGVVFPPGLDRIEFVDTYRRVESGGEDSS 351
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11566.1364.1 vs. uniprot
Match: A0A6H5L6U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.180e-8
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0 
Query:    1 LVLGTEFCGDLKGVPWPPTLSSIVFWRR 28
            LVLGTEFCGDLKGVPWPPTLSSIVFWRR
Sbjct:  395 LVLGTEFCGDLKGVPWPPTLSSIVFWRR 422
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11566.1364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHW9_ECTSI7.680e-10100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9V1_9PHAE1.180e-893.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6U6_9PHAE2.180e-8100.00Reverse transcriptase domain-containing protein n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 273..315
e-value: 7.9E-5
score: 22.7
coord: 207..248
e-value: 8.3E-7
score: 29.1
coord: 73..116
e-value: 3.4E-6
score: 27.1
coord: 29..71
e-value: 8.7E-5
score: 22.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 216..360
coord: 82..265
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 1..210
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 82..265
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 216..360
coord: 1..210
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 18..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11566contigEcto-sp13_S_contig11566:1..2350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11566.1364.1mRNA_Ecto-sp13_S_contig11566.1364.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11566 1..2350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11566.1364.1 ID=prot_Ecto-sp13_S_contig11566.1364.1|Name=mRNA_Ecto-sp13_S_contig11566.1364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
LVLGTEFCGDLKGVPWPPTLSSIVFWRRFNRAIDEVTWPQSLRKLTFGCN
FNQPVLGVRWPPALEVLTFGSWFDRPLAGVRFPDTLTTLALGRDFNQPLE
GIQWPQRLARLTFGFFFNRSIRTAAKNWPATLKHLSLGDCYNLPVEDVEW
PRGLEEILFGRGFNQQVEGVEWPPALRKVKFGACFDQSIADAGFPEELET
LELGFAFNRPFLDVVLPSGLKRLVFGEEFNRTVEGVGFPPGLEEIYFGVQ
FDQPVAAAVWPASLKILTFGDSFNKPLVGIRLPDGLLDCRFGKCFNQEID
QVSWPHSVRCLVFGEEFNHPICDVVWPESLTTLKLGSDFDRKMEAGVVFP
PGLDRIEFVDTYRRVEGGGENSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP